RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SPDYE16A6NNV3 312 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-208ENST00000474246 POTEJP0CG39 1038 aa7.61□□□□□ -1.19
SMARCE1-208ENST00000474246 POU5F1Q01860 360 aaKnown RBP7.61□□□□□ -1.19
SMARCE1-208ENST00000474246 EGFLAMQ63HQ2 1017 aa7.61□□□□□ -1.19
SMARCE1-208ENST00000474246 ICE2Q659A1 982 aa7.61□□□□□ -1.19
SMARCE1-208ENST00000474246 NBPF10Q6P3W6 841 aaKnown RBP7.61□□□□□ -1.19
SMARCE1-208ENST00000474246 NRBP1Q9UHY1 535 aa7.61□□□□□ -1.19
SMARCE1-208ENST00000474246 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-208ENST00000474246 TULP4Q9NRJ4 1543 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 MYOM2P54296 1465 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 TLDC2A0PJX2 215 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 CCDC146Q8IYE0 955 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 ZCRB1Q8TBF4 217 aaKnown RBP7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 OXER1Q8TDS5 423 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 SLC26A8Q96RN1 970 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 IRF2BPLQ9H1B7 796 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 ARHGEF28Q8N1W1 1705 aaKnown RBP7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 COL22A1Q8NFW1 1626 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 SAMD9Q5K651 1589 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 GRXCR2A6NFK2 248 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 IRF6O14896 467 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 CSB-PGBD3P0DP91 1061 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 COL9A1P20849 921 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 IBSPP21815 317 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 SPACA7Q96KW9 195 aa7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 ZNF330Q9Y3S2 320 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-208ENST00000474246 GPATCH8Q9UKJ3 1502 aaKnown RBP7.59□□□□□ -1.19
SMARCE1-208ENST00000474246 BIRC2Q13490 618 aa7.58□□□□□ -1.2
SMARCE1-208ENST00000474246 ZRSR2Q15696 482 aaKnown RBP7.58□□□□□ -1.2
SMARCE1-208ENST00000474246 FAM163AQ96GL9 167 aaPredicted RBP7.58□□□□□ -1.2
SMARCE1-208ENST00000474246 STK32BQ9NY57 414 aa7.58□□□□□ -1.2
SMARCE1-208ENST00000474246 EHBP1L1Q8N3D4 1523 aa7.58□□□□□ -1.2
SMARCE1-208ENST00000474246 MARF1Q9Y4F3 1742 aaKnown RBP7.58□□□□□ -1.2
SMARCE1-208ENST00000474246 CCDC189A1A4V9 331 aa7.58□□□□□ -1.2
SMARCE1-208ENST00000474246 TBC1D12O60347 775 aa7.58□□□□□ -1.2
SMARCE1-208ENST00000474246 FAM200BP0CF97 657 aa7.58□□□□□ -1.2
SMARCE1-208ENST00000474246 HSPA8P11142 646 aaKnown RBP7.58□□□□□ -1.2
SMARCE1-208ENST00000474246 SYNPO2Q9UMS6 1093 aa7.58□□□□□ -1.2
SMARCE1-208ENST00000474246 SOS2Q07890 1332 aaPredicted RBP7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 CARNS1A5YM72 827 aa7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 ZKSCAN8Q15776 578 aaPredicted RBP7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 BCL2L13Q9BXK5 485 aa7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 TMEM51Q9NW97 253 aa7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 MYO5CQ9NQX4 1742 aa7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 PLXNC1O60486 1568 aa7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 HOXA2O43364 376 aa7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 XPCQ01831 940 aaPredicted RBP7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 LMOD3Q0VAK6 560 aa7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 FAM182BQ5T319 152 aa7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 PCGF5Q86SE9 256 aa7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 DDX12PQ92771 950 aa7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 PBXIP1Q96AQ6 731 aa7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 PDGFDQ9GZP0 370 aaPredicted RBP7.57□□□□□ -1.2
SMARCE1-208ENST00000474246 ARHGAP5Q13017 1502 aa7.56□□□□□ -1.2
SMARCE1-208ENST00000474246 VDRP11473 427 aa7.56□□□□□ -1.2
SMARCE1-208ENST00000474246 FAM98CQ17RN3 349 aaKnown RBP7.56□□□□□ -1.2
SMARCE1-208ENST00000474246 TAF3Q5VWG9 929 aa7.56□□□□□ -1.2
SMARCE1-208ENST00000474246 SDE2Q6IQ49 451 aa7.56□□□□□ -1.2
SMARCE1-208ENST00000474246 DNAJC14Q6Y2X3 702 aaPredicted RBP7.56□□□□□ -1.2
SMARCE1-208ENST00000474246 GPIHBP1Q8IV16 184 aa7.56□□□□□ -1.2
SMARCE1-208ENST00000474246 ZNF513Q8N8E2 541 aaPredicted RBP7.56□□□□□ -1.2
SMARCE1-208ENST00000474246 RPS6KC1Q96S38 1066 aa7.56□□□□□ -1.2
SMARCE1-208ENST00000474246 RAI14Q9P0K7 980 aa7.56□□□□□ -1.2
SMARCE1-208ENST00000474246 ABCF2Q9UG63 623 aa7.56□□□□□ -1.2
SMARCE1-208ENST00000474246 PDZRN3Q9UPQ7 1066 aa7.56□□□□□ -1.2
SMARCE1-208ENST00000474246 TET3O43151 1660 aa7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 EVI5O60447 810 aa7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 MAP2K1Q02750 393 aaPredicted RBP7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 PCMTD1Q96MG8 357 aaPredicted RBP7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 LNPKQ9C0E8 428 aa7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 RSPH9Q9H1X1 276 aaPredicted RBP7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 USP32Q8NFA0 1604 aa7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 CUL9Q8IWT3 2517 aa7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 C1orf131Q8NDD1 294 aaKnown RBP7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 DDX17Q92841 729 aaKnown RBP7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 TBC1D2Q9BYX2 928 aa7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 WBP1LQ9NX94 342 aa7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 MAP3K20Q9NYL2 800 aaKnown RBP7.55□□□□□ -1.2
SMARCE1-208ENST00000474246 UBR1Q8IWV7 1749 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 C10orf71Q711Q0 1435 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 PRAG1Q86YV5 1406 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 BICDL2A1A5D9 508 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 CBFA2T2O43439 604 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 TBC1D10BQ4KMP7 808 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 RPAINQ86UA6 219 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 PAGR1Q9BTK6 254 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 INO80BQ9C086 356 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 NMRK2Q9NPI5 230 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 SPAG9O60271 1321 aaKnown RBP7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 WASHC2CQ9Y4E1 1318 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 MST1RQ04912 1400 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 C11orf95C9JLR9 678 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 NEXNQ0ZGT2 675 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 PDILTQ8N807 584 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 GIPC2Q8TF65 315 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 PTCD2Q8WV60 388 aaKnown RBP7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 BRINP2Q9C0B6 783 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 GNEQ9Y223 722 aaKnown RBP7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 SCINQ9Y6U3 715 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms