RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 PRR5LQ6MZQ0 368 aa26.71■■□□□ 1.87
SNX13-206ENST00000474067 CHMP4AQ9BY43 222 aa26.7■■□□□ 1.86
SNX13-206ENST00000474067 NIP7Q9Y221 180 aaKnown RBP eCLIP26.7■■□□□ 1.86
SNX13-206ENST00000474067 UTRNP46939 3433 aa26.7■■□□□ 1.86
SNX13-206ENST00000474067 DLEC1Q9Y238 1755 aa26.69■■□□□ 1.86
SNX13-206ENST00000474067 NYXQ9GZU5 481 aa26.69■■□□□ 1.86
SNX13-206ENST00000474067 GPBP1L1Q9HC44 474 aaPredicted RBP26.69■■□□□ 1.86
SNX13-206ENST00000474067 ATP10DQ9P241 1426 aa26.69■■□□□ 1.86
SNX13-206ENST00000474067 ADCY9O60503 1353 aa26.69■■□□□ 1.86
SNX13-206ENST00000474067 MAP3K15Q6ZN16 1313 aa26.68■■□□□ 1.86
SNX13-206ENST00000474067 CHL1O00533 1208 aa26.68■■□□□ 1.86
SNX13-206ENST00000474067 HOXB7P09629 217 aa26.68■■□□□ 1.86
SNX13-206ENST00000474067 GTF2E1P29083 439 aaPredicted RBP26.68■■□□□ 1.86
SNX13-206ENST00000474067 TRIM35Q9UPQ4 493 aa26.68■■□□□ 1.86
SNX13-206ENST00000474067 LAS1LQ9Y4W2 734 aaKnown RBP26.68■■□□□ 1.86
SNX13-206ENST00000474067 MYL6BP14649 208 aa26.67■■□□□ 1.86
SNX13-206ENST00000474067 CFAP44Q96MT7 982 aa26.67■■□□□ 1.86
SNX13-206ENST00000474067 NGEFQ8N5V2 710 aa26.66■■□□□ 1.86
SNX13-206ENST00000474067 CNKSR1Q969H4 720 aa26.66■■□□□ 1.86
SNX13-206ENST00000474067 EIF2S2P20042 333 aaKnown RBP26.65■■□□□ 1.86
SNX13-206ENST00000474067 ZNF622Q969S3 477 aaKnown RBP eCLIP26.65■■□□□ 1.86
SNX13-206ENST00000474067 SOGA3Q5TF21 947 aa26.64■■□□□ 1.86
SNX13-206ENST00000474067 APAF1O14727 1248 aa26.63■■□□□ 1.85
SNX13-206ENST00000474067 GNAI1P63096 354 aa26.63■■□□□ 1.85
SNX13-206ENST00000474067 STYK1Q6J9G0 422 aa26.63■■□□□ 1.85
SNX13-206ENST00000474067 MASTLQ96GX5 879 aa26.63■■□□□ 1.85
SNX13-206ENST00000474067 IFT57Q9NWB7 429 aa26.62■■□□□ 1.85
SNX13-206ENST00000474067 GOLGB1Q14789 3259 aaKnown RBP26.61■■□□□ 1.85
SNX13-206ENST00000474067 IBTKQ9P2D0 1353 aaPredicted RBP26.61■■□□□ 1.85
SNX13-206ENST00000474067 HSP90AB3PQ58FF7 597 aa26.61■■□□□ 1.85
SNX13-206ENST00000474067 MRS2Q9HD23 443 aa26.61■■□□□ 1.85
SNX13-206ENST00000474067 ZC3H4Q9UPT8 1303 aaKnown RBP26.61■■□□□ 1.85
SNX13-206ENST00000474067 PARP10Q53GL7 1025 aa26.6■■□□□ 1.85
SNX13-206ENST00000474067 GIGYF2Q6Y7W6 1299 aaKnown RBP26.6■■□□□ 1.85
SNX13-206ENST00000474067 HLFQ16534 295 aa26.59■■□□□ 1.85
SNX13-206ENST00000474067 PPP1R42Q7Z4L9 355 aa26.59■■□□□ 1.85
SNX13-206ENST00000474067 DDX21Q9NR30 783 aaKnown RBP eCLIP26.59■■□□□ 1.85
SNX13-206ENST00000474067 ANKRD31Q8N7Z5 1873 aa26.59■■□□□ 1.85
SNX13-206ENST00000474067 SRGNP10124 158 aa26.58■■□□□ 1.85
SNX13-206ENST00000474067 NPR1P16066 1061 aa26.58■■□□□ 1.85
SNX13-206ENST00000474067 C1QTNF8P60827 252 aa26.58■■□□□ 1.85
SNX13-206ENST00000474067 NCBP3Q53F19 620 aaKnown RBP26.58■■□□□ 1.85
SNX13-206ENST00000474067 HDGFL1Q5TGJ6 251 aa26.58■■□□□ 1.85
SNX13-206ENST00000474067 C9orf131Q5VYM1 1079 aa26.58■■□□□ 1.85
SNX13-206ENST00000474067 ZBTB3Q9H5J0 574 aa26.58■■□□□ 1.85
SNX13-206ENST00000474067 DBF4Q9UBU7 674 aaPredicted RBP26.57■■□□□ 1.84
SNX13-206ENST00000474067 RNF123Q5XPI4 1314 aa26.57■■□□□ 1.84
SNX13-206ENST00000474067 NUP98P52948 1817 aa26.56■■□□□ 1.84
SNX13-206ENST00000474067 LMNB1P20700 586 aa26.56■■□□□ 1.84
SNX13-206ENST00000474067 ALDH1B1P30837 517 aa26.56■■□□□ 1.84
SNX13-206ENST00000474067 TTLL7Q6ZT98 887 aa26.56■■□□□ 1.84
SNX13-206ENST00000474067 RNF181Q9P0P0 153 aa26.56■■□□□ 1.84
SNX13-206ENST00000474067 CCDC27Q2M243 656 aa26.55■■□□□ 1.84
SNX13-206ENST00000474067 KDM2BQ8NHM5 1336 aa26.55■■□□□ 1.84
SNX13-206ENST00000474067 PDIA6Q15084 440 aa26.54■■□□□ 1.84
SNX13-206ENST00000474067 CCDC24Q8N4L8 307 aa26.54■■□□□ 1.84
SNX13-206ENST00000474067 ZNF526Q8TF50 670 aaPredicted RBP26.54■■□□□ 1.84
SNX13-206ENST00000474067 MBIPQ9NS73 344 aa26.54■■□□□ 1.84
SNX13-206ENST00000474067 KLRG2A4D1S0 409 aaPredicted RBP26.53■■□□□ 1.84
SNX13-206ENST00000474067 FAM177BA6PVY3 158 aa26.53■■□□□ 1.84
SNX13-206ENST00000474067 HYPKQ9NX55 129 aa26.53■■□□□ 1.84
SNX13-206ENST00000474067 RIC1Q4ADV7 1423 aa26.53■■□□□ 1.84
SNX13-206ENST00000474067 ZNF853P0CG23 659 aa26.52■■□□□ 1.84
SNX13-206ENST00000474067 COPS6Q7L5N1 327 aa26.52■■□□□ 1.84
SNX13-206ENST00000474067 ZNF34Q8IZ26 560 aa26.52■■□□□ 1.84
SNX13-206ENST00000474067 COL11A2P13942 1736 aaPredicted RBP26.51■■□□□ 1.83
SNX13-206ENST00000474067 DUSP27Q5VZP5 1158 aa26.51■■□□□ 1.83
SNX13-206ENST00000474067 PRPF40BQ6NWY9 871 aaKnown RBP26.51■■□□□ 1.83
SNX13-206ENST00000474067 ARFGEF2Q9Y6D5 1785 aa26.51■■□□□ 1.83
SNX13-206ENST00000474067 LTBP3Q9NS15 1303 aa26.5■■□□□ 1.83
SNX13-206ENST00000474067 C21orf2O43822 256 aa26.5■■□□□ 1.83
SNX13-206ENST00000474067 GPTP24298 496 aa26.5■■□□□ 1.83
SNX13-206ENST00000474067 LRP10Q7Z4F1 713 aa26.5■■□□□ 1.83
SNX13-206ENST00000474067 XAGE3Q8WTP9 111 aa26.5■■□□□ 1.83
SNX13-206ENST00000474067 NECTIN2Q92692 538 aa26.5■■□□□ 1.83
SNX13-206ENST00000474067 AIMP1Q12904 312 aaKnown RBP26.49■■□□□ 1.83
SNX13-206ENST00000474067 RPGRQ92834 1020 aaKnown RBP26.49■■□□□ 1.83
SNX13-206ENST00000474067 TAOK3Q9H2K8 898 aa26.49■■□□□ 1.83
SNX13-206ENST00000474067 CHPF2Q9P2E5 772 aa26.49■■□□□ 1.83
SNX13-206ENST00000474067 GRIPAP1Q4V328 841 aa26.48■■□□□ 1.83
SNX13-206ENST00000474067 CCDC93Q567U6 631 aa26.48■■□□□ 1.83
SNX13-206ENST00000474067 UTP14AQ9BVJ6 771 aaKnown RBP26.48■■□□□ 1.83
SNX13-206ENST00000474067 TMX4Q9H1E5 349 aaPredicted RBP26.47■■□□□ 1.83
SNX13-206ENST00000474067 SBF1O95248 1867 aa26.47■■□□□ 1.83
SNX13-206ENST00000474067 IL16Q14005 1332 aa26.46■■□□□ 1.83
SNX13-206ENST00000474067 UBN2Q6ZU65 1347 aa26.46■■□□□ 1.83
SNX13-206ENST00000474067 RASSF7Q02833 373 aa26.46■■□□□ 1.83
SNX13-206ENST00000474067 KRT24Q2M2I5 525 aa26.46■■□□□ 1.83
SNX13-206ENST00000474067 PROSER3Q2NL68 480 aa26.46■■□□□ 1.83
SNX13-206ENST00000474067 CRY2Q49AN0 593 aa26.46■■□□□ 1.83
SNX13-206ENST00000474067 SUSD4Q5VX71 490 aa26.46■■□□□ 1.83
SNX13-206ENST00000474067 CC2D2BQ6DHV5 1058 aa26.46■■□□□ 1.83
SNX13-206ENST00000474067 C16orf71Q8IYS4 520 aaPredicted RBP26.46■■□□□ 1.83
SNX13-206ENST00000474067 RTKN2Q8IZC4 609 aa26.46■■□□□ 1.83
SNX13-206ENST00000474067 PLBD2Q8NHP8 589 aa26.46■■□□□ 1.83
SNX13-206ENST00000474067 NLRP3Q96P20 1036 aa26.46■■□□□ 1.83
SNX13-206ENST00000474067 ANXA1P04083 346 aa26.45■■□□□ 1.82
SNX13-206ENST00000474067 TCIRG1Q13488 830 aa26.45■■□□□ 1.82
SNX13-206ENST00000474067 ERFEQ4G0M1 354 aa26.45■■□□□ 1.82
SNX13-206ENST00000474067 CCDC184Q52MB2 194 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms