RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ZBTB1Q9Y2K1 713 aa12.91□□□□□ -0.34
PRPF38A-202ENST00000474048 CNTNAP4Q9C0A0 1308 aa12.9□□□□□ -0.34
PRPF38A-202ENST00000474048 ATP10DQ9P241 1426 aa12.9□□□□□ -0.34
PRPF38A-202ENST00000474048 ALDH1L1O75891 902 aa12.9□□□□□ -0.34
PRPF38A-202ENST00000474048 UBTFL1P0CB47 393 aaPredicted RBP12.9□□□□□ -0.34
PRPF38A-202ENST00000474048 DZIP3Q86Y13 1208 aaKnown RBP12.9□□□□□ -0.34
PRPF38A-202ENST00000474048 MYD88Q99836 296 aa12.9□□□□□ -0.34
PRPF38A-202ENST00000474048 ZBTB3Q9H5J0 574 aa12.9□□□□□ -0.34
PRPF38A-202ENST00000474048 ZNF652Q9Y2D9 606 aa12.9□□□□□ -0.34
PRPF38A-202ENST00000474048 ADCY9O60503 1353 aa12.9□□□□□ -0.34
PRPF38A-202ENST00000474048 NBPF26B4DH59 902 aa12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 ITPK1Q13572 414 aa12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 NBPF14Q5TI25 921 aa12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 B4GALNT3Q6L9W6 998 aa12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 NBPF10Q6P3W6 841 aaKnown RBP12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 NBPF15Q8N660 670 aa12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 LINS1Q8NG48 757 aa12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 METTL22Q9BUU2 404 aaPredicted RBP12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 RTCBQ9Y3I0 505 aaKnown RBP12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 TAF1LQ8IZX4 1826 aa12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 COL15A1P39059 1388 aa12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 RREB1Q92766 1687 aa12.89□□□□□ -0.35
PRPF38A-202ENST00000474048 GNPATO15228 680 aa12.88□□□□□ -0.35
PRPF38A-202ENST00000474048 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
PRPF38A-202ENST00000474048 PTF1AQ7RTS3 328 aa12.88□□□□□ -0.35
PRPF38A-202ENST00000474048 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
PRPF38A-202ENST00000474048 RWDD1Q9H446 243 aaPredicted RBP12.88□□□□□ -0.35
PRPF38A-202ENST00000474048 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
PRPF38A-202ENST00000474048 RGPD3A6NKT7 1758 aaPredicted RBP12.88□□□□□ -0.35
PRPF38A-202ENST00000474048 RGPD4Q7Z3J3 1758 aa12.88□□□□□ -0.35
PRPF38A-202ENST00000474048 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
PRPF38A-202ENST00000474048 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
PRPF38A-202ENST00000474048 TNS1Q9HBL0 1735 aaKnown RBP12.88□□□□□ -0.35
PRPF38A-202ENST00000474048 MAP3K15Q6ZN16 1313 aa12.88□□□□□ -0.35
PRPF38A-202ENST00000474048 HMMRO75330 724 aa12.87□□□□□ -0.35
PRPF38A-202ENST00000474048 GNAI2P04899 355 aa12.87□□□□□ -0.35
PRPF38A-202ENST00000474048 BAG6P46379 1132 aa12.87□□□□□ -0.35
PRPF38A-202ENST00000474048 PLSCR1O15162 318 aa12.86□□□□□ -0.35
PRPF38A-202ENST00000474048 ZPR1O75312 459 aa12.86□□□□□ -0.35
PRPF38A-202ENST00000474048 KCNQ4P56696 695 aa12.86□□□□□ -0.35
PRPF38A-202ENST00000474048 BEND3Q5T5X7 828 aa12.86□□□□□ -0.35
PRPF38A-202ENST00000474048 INTS5Q6P9B9 1019 aaKnown RBP12.86□□□□□ -0.35
PRPF38A-202ENST00000474048 TTLL7Q6ZT98 887 aa12.86□□□□□ -0.35
PRPF38A-202ENST00000474048 ANKRD36CQ5JPF3 1778 aa12.86□□□□□ -0.35
PRPF38A-202ENST00000474048 ERVV-1B6SEH8 477 aa12.85□□□□□ -0.35
PRPF38A-202ENST00000474048 ZBTB7BO15156 539 aaPredicted RBP12.85□□□□□ -0.35
PRPF38A-202ENST00000474048 TXNRD1Q16881 649 aa12.85□□□□□ -0.35
PRPF38A-202ENST00000474048 CENPQQ7L2Z9 268 aaPredicted RBP12.85□□□□□ -0.35
PRPF38A-202ENST00000474048 MEIS3Q99687 375 aa12.85□□□□□ -0.35
PRPF38A-202ENST00000474048 ZBTB40Q9NUA8 1239 aa12.85□□□□□ -0.35
PRPF38A-202ENST00000474048 CWC25Q9NXE8 425 aaPredicted RBP12.85□□□□□ -0.35
PRPF38A-202ENST00000474048 TBC1D2BQ9UPU7 963 aa12.85□□□□□ -0.35
PRPF38A-202ENST00000474048 NEURL1BA8MQ27 555 aa12.84□□□□□ -0.35
PRPF38A-202ENST00000474048 RPS6KA4O75676 772 aa12.84□□□□□ -0.35
PRPF38A-202ENST00000474048 PHF14O94880 888 aa12.84□□□□□ -0.35
PRPF38A-202ENST00000474048 RFC4P35249 363 aa12.84□□□□□ -0.35
PRPF38A-202ENST00000474048 EIF5P55010 431 aaKnown RBP12.84□□□□□ -0.35
PRPF38A-202ENST00000474048 CWF19L2Q2TBE0 894 aaKnown RBP12.84□□□□□ -0.35
PRPF38A-202ENST00000474048 GIGYF2Q6Y7W6 1299 aaKnown RBP12.84□□□□□ -0.35
PRPF38A-202ENST00000474048 LRP10Q7Z4F1 713 aa12.84□□□□□ -0.35
PRPF38A-202ENST00000474048 C1orf115Q9H7X2 142 aa12.84□□□□□ -0.35
PRPF38A-202ENST00000474048 MYH14Q7Z406 1995 aaKnown RBP12.83□□□□□ -0.35
PRPF38A-202ENST00000474048 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
PRPF38A-202ENST00000474048 GRM8O00222 908 aa12.83□□□□□ -0.36
PRPF38A-202ENST00000474048 NPHP1O15259 732 aa12.83□□□□□ -0.36
PRPF38A-202ENST00000474048 HSP90B1P14625 803 aaKnown RBP12.83□□□□□ -0.36
PRPF38A-202ENST00000474048 TCIRG1Q13488 830 aa12.83□□□□□ -0.36
PRPF38A-202ENST00000474048 TRAPPC3LQ5T215 181 aa12.83□□□□□ -0.36
PRPF38A-202ENST00000474048 RPAP2Q8IXW5 612 aaPredicted RBP12.83□□□□□ -0.36
PRPF38A-202ENST00000474048 CCDC191Q8NCU4 936 aa12.83□□□□□ -0.36
PRPF38A-202ENST00000474048 BCORQ6W2J9 1755 aa12.83□□□□□ -0.36
PRPF38A-202ENST00000474048 NUP98P52948 1817 aa12.83□□□□□ -0.36
PRPF38A-202ENST00000474048 SCN7AQ01118 1682 aa12.83□□□□□ -0.36
PRPF38A-202ENST00000474048 GCKRQ14397 625 aa12.82□□□□□ -0.36
PRPF38A-202ENST00000474048 CCDC125Q86Z20 511 aa12.82□□□□□ -0.36
PRPF38A-202ENST00000474048 TFCP2L1Q9NZI6 479 aa12.82□□□□□ -0.36
PRPF38A-202ENST00000474048 GPTP24298 496 aa12.81□□□□□ -0.36
PRPF38A-202ENST00000474048 SSFA2P28290 1259 aa12.81□□□□□ -0.36
PRPF38A-202ENST00000474048 PARP10Q53GL7 1025 aa12.81□□□□□ -0.36
PRPF38A-202ENST00000474048 PPP1R42Q7Z4L9 355 aa12.81□□□□□ -0.36
PRPF38A-202ENST00000474048 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
PRPF38A-202ENST00000474048 LRRFIP2Q9Y608 721 aaKnown RBP12.81□□□□□ -0.36
PRPF38A-202ENST00000474048 IBTKQ9P2D0 1353 aaPredicted RBP12.81□□□□□ -0.36
PRPF38A-202ENST00000474048 RGL2O15211 777 aa12.8□□□□□ -0.36
PRPF38A-202ENST00000474048 IGKV5-2P06315 115 aa12.8□□□□□ -0.36
PRPF38A-202ENST00000474048 GTF2E1P29083 439 aaPredicted RBP12.8□□□□□ -0.36
PRPF38A-202ENST00000474048 CLEC4GQ6UXB4 293 aa12.8□□□□□ -0.36
PRPF38A-202ENST00000474048 UBE3BQ7Z3V4 1068 aa12.8□□□□□ -0.36
PRPF38A-202ENST00000474048 USP44Q9H0E7 712 aa12.8□□□□□ -0.36
PRPF38A-202ENST00000474048 STK32BQ9NY57 414 aa12.8□□□□□ -0.36
PRPF38A-202ENST00000474048 NIP7Q9Y221 180 aaKnown RBP eCLIP12.8□□□□□ -0.36
PRPF38A-202ENST00000474048 UBR3Q6ZT12 1888 aa12.79□□□□□ -0.36
PRPF38A-202ENST00000474048 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
PRPF38A-202ENST00000474048 ANKRD44Q8N8A2 993 aa12.79□□□□□ -0.36
PRPF38A-202ENST00000474048 LRRC4BQ9NT99 713 aa12.79□□□□□ -0.36
PRPF38A-202ENST00000474048 NARFQ9UHQ1 456 aa12.79□□□□□ -0.36
PRPF38A-202ENST00000474048 TRMT112Q9UI30 125 aaKnown RBP12.79□□□□□ -0.36
PRPF38A-202ENST00000474048 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
PRPF38A-202ENST00000474048 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms