RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 HYPKQ9NX55 129 aa15.98■□□□□ 0.15
DDX56-209ENST00000473924 SCN7AQ01118 1682 aa15.98■□□□□ 0.15
DDX56-209ENST00000473924 COPS6Q7L5N1 327 aa15.97■□□□□ 0.15
DDX56-209ENST00000473924 XAGE3Q8WTP9 111 aa15.97■□□□□ 0.15
DDX56-209ENST00000473924 MAP3K15Q6ZN16 1313 aa15.96■□□□□ 0.15
DDX56-209ENST00000473924 BCORQ6W2J9 1755 aa15.96■□□□□ 0.15
DDX56-209ENST00000473924 TCERG1O14776 1098 aaKnown RBP15.96■□□□□ 0.15
DDX56-209ENST00000473924 VAMP4O75379 141 aa15.96■□□□□ 0.15
DDX56-209ENST00000473924 NFIXQ14938 502 aa15.96■□□□□ 0.15
DDX56-209ENST00000473924 TBC1D9BQ66K14 1250 aa15.96■□□□□ 0.15
DDX56-209ENST00000473924 CLEC4GQ6UXB4 293 aa15.96■□□□□ 0.15
DDX56-209ENST00000473924 LRP10Q7Z4F1 713 aa15.96■□□□□ 0.15
DDX56-209ENST00000473924 ZBTB3Q9H5J0 574 aa15.96■□□□□ 0.15
DDX56-209ENST00000473924 ERVV-1B6SEH8 477 aa15.95■□□□□ 0.14
DDX56-209ENST00000473924 TM4SF1P30408 202 aa15.95■□□□□ 0.14
DDX56-209ENST00000473924 SETDB2Q96T68 719 aa15.95■□□□□ 0.14
DDX56-209ENST00000473924 RGL2O15211 777 aa15.94■□□□□ 0.14
DDX56-209ENST00000473924 DDR1Q08345 913 aa15.94■□□□□ 0.14
DDX56-209ENST00000473924 HLFQ16534 295 aa15.94■□□□□ 0.14
DDX56-209ENST00000473924 FHDC1Q9C0D6 1143 aaPredicted RBP15.94■□□□□ 0.14
DDX56-209ENST00000473924 ZBED9Q6R2W3 1325 aa15.94■□□□□ 0.14
DDX56-209ENST00000473924 POLRMTO00411 1230 aaKnown RBP15.93■□□□□ 0.14
DDX56-209ENST00000473924 NPHP1O15259 732 aa15.93■□□□□ 0.14
DDX56-209ENST00000473924 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
DDX56-209ENST00000473924 PHAXQ9H814 394 aaKnown RBP15.93■□□□□ 0.14
DDX56-209ENST00000473924 NIP7Q9Y221 180 aaKnown RBP eCLIP15.93■□□□□ 0.14
DDX56-209ENST00000473924 CARMIL3Q8ND23 1372 aa15.92■□□□□ 0.14
DDX56-209ENST00000473924 SERPINB2P05120 415 aa15.92■□□□□ 0.14
DDX56-209ENST00000473924 GIGYF2Q6Y7W6 1299 aaKnown RBP15.92■□□□□ 0.14
DDX56-209ENST00000473924 ANKRD13DQ6ZTN6 518 aa15.92■□□□□ 0.14
DDX56-209ENST00000473924 TRMT2AQ8IZ69 625 aaKnown RBP15.92■□□□□ 0.14
DDX56-209ENST00000473924 DDX58O95786 925 aaKnown RBP15.91■□□□□ 0.14
DDX56-209ENST00000473924 RIC3Q7Z5B4 369 aa15.91■□□□□ 0.14
DDX56-209ENST00000473924 PLBD2Q8NHP8 589 aa15.91■□□□□ 0.14
DDX56-209ENST00000473924 SYT17Q9BSW7 474 aa15.91■□□□□ 0.14
DDX56-209ENST00000473924 NUP98P52948 1817 aa15.91■□□□□ 0.14
DDX56-209ENST00000473924 SRCAPQ6ZRS2 3230 aa15.9■□□□□ 0.14
DDX56-209ENST00000473924 FAM177BA6PVY3 158 aa15.9■□□□□ 0.14
DDX56-209ENST00000473924 GPTP24298 496 aa15.9■□□□□ 0.14
DDX56-209ENST00000473924 HSP90AB3PQ58FF7 597 aa15.9■□□□□ 0.14
DDX56-209ENST00000473924 NBPF5PQ86XG9 351 aaPredicted RBP15.9■□□□□ 0.14
DDX56-209ENST00000473924 CD2APQ9Y5K6 639 aa15.9■□□□□ 0.14
DDX56-209ENST00000473924 ATP10DQ9P241 1426 aa15.89■□□□□ 0.13
DDX56-209ENST00000473924 CT47B1P0C2W7 299 aaPredicted RBP15.88■□□□□ 0.13
DDX56-209ENST00000473924 GTF2E1P29083 439 aaPredicted RBP15.88■□□□□ 0.13
DDX56-209ENST00000473924 CNBD1Q8NA66 436 aa15.88■□□□□ 0.13
DDX56-209ENST00000473924 ZNF428Q96B54 188 aa15.88■□□□□ 0.13
DDX56-209ENST00000473924 AFDNP55196 1824 aaKnown RBP15.88■□□□□ 0.13
DDX56-209ENST00000473924 ST5P78524 1137 aa15.87■□□□□ 0.13
DDX56-209ENST00000473924 FLIIQ13045 1269 aa15.87■□□□□ 0.13
DDX56-209ENST00000473924 FKBP5Q13451 457 aaPredicted RBP15.87■□□□□ 0.13
DDX56-209ENST00000473924 TCIRG1Q13488 830 aa15.87■□□□□ 0.13
DDX56-209ENST00000473924 TPTE2Q6XPS3 522 aa15.87■□□□□ 0.13
DDX56-209ENST00000473924 G2E3Q7L622 706 aa15.87■□□□□ 0.13
DDX56-209ENST00000473924 ZNF34Q8IZ26 560 aa15.87■□□□□ 0.13
DDX56-209ENST00000473924 C10orf71Q711Q0 1435 aa15.86■□□□□ 0.13
DDX56-209ENST00000473924 CACNA1FO60840 1977 aa15.86■□□□□ 0.13
DDX56-209ENST00000473924 PARP10Q53GL7 1025 aa15.86■□□□□ 0.13
DDX56-209ENST00000473924 PRR5LQ6MZQ0 368 aa15.86■□□□□ 0.13
DDX56-209ENST00000473924 KSR2Q6VAB6 950 aa15.86■□□□□ 0.13
DDX56-209ENST00000473924 PPP1R42Q7Z4L9 355 aa15.86■□□□□ 0.13
DDX56-209ENST00000473924 CCDC24Q8N4L8 307 aa15.86■□□□□ 0.13
DDX56-209ENST00000473924 NLGN2Q8NFZ4 835 aa15.86■□□□□ 0.13
DDX56-209ENST00000473924 YTHDC1Q96MU7 727 aaKnown RBP15.86■□□□□ 0.13
DDX56-209ENST00000473924 NYXQ9GZU5 481 aa15.86■□□□□ 0.13
DDX56-209ENST00000473924 MAP3K2Q9Y2U5 619 aa15.86■□□□□ 0.13
DDX56-209ENST00000473924 NRXN2Q9P2S2 1712 aa15.85■□□□□ 0.13
DDX56-209ENST00000473924 ARFGEF2Q9Y6D5 1785 aa15.85■□□□□ 0.13
DDX56-209ENST00000473924 PI4KAP2A4QPH2 592 aa15.85■□□□□ 0.13
DDX56-209ENST00000473924 TGFB2P61812 414 aa15.85■□□□□ 0.13
DDX56-209ENST00000473924 PI4KAP1Q8N8J0 262 aa15.85■□□□□ 0.13
DDX56-209ENST00000473924 MYD88Q99836 296 aa15.85■□□□□ 0.13
DDX56-209ENST00000473924 UBN2Q6ZU65 1347 aa15.85■□□□□ 0.13
DDX56-209ENST00000473924 ANKRD36CQ5JPF3 1778 aa15.85■□□□□ 0.13
DDX56-209ENST00000473924 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
DDX56-209ENST00000473924 ATP5J2-PTCD1G3V325 749 aa15.84■□□□□ 0.13
DDX56-209ENST00000473924 NEXNQ0ZGT2 675 aa15.84■□□□□ 0.13
DDX56-209ENST00000473924 ALDH1L2Q3SY69 923 aa15.84■□□□□ 0.13
DDX56-209ENST00000473924 SUSD4Q5VX71 490 aa15.84■□□□□ 0.13
DDX56-209ENST00000473924 SSH1Q8WYL5 1049 aa15.84■□□□□ 0.13
DDX56-209ENST00000473924 BCL2L13Q9BXK5 485 aa15.84■□□□□ 0.13
DDX56-209ENST00000473924 SMC4Q9NTJ3 1288 aa15.84■□□□□ 0.13
DDX56-209ENST00000473924 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
DDX56-209ENST00000473924 NLRP10Q86W26 655 aa15.83■□□□□ 0.12
DDX56-209ENST00000473924 NUTM1Q86Y26 1132 aa15.83■□□□□ 0.12
DDX56-209ENST00000473924 MRPL50Q8N5N7 158 aaKnown RBP15.83■□□□□ 0.12
DDX56-209ENST00000473924 METTL22Q9BUU2 404 aaPredicted RBP15.83■□□□□ 0.12
DDX56-209ENST00000473924 UTP14AQ9BVJ6 771 aaKnown RBP15.83■□□□□ 0.12
DDX56-209ENST00000473924 BRIP1Q9BX63 1249 aa15.83■□□□□ 0.12
DDX56-209ENST00000473924 A0A0G2JLW4 131 aa15.82■□□□□ 0.12
DDX56-209ENST00000473924 PDE6BP35913 854 aa15.82■□□□□ 0.12
DDX56-209ENST00000473924 PELP1Q8IZL8 1130 aaKnown RBP15.82■□□□□ 0.12
DDX56-209ENST00000473924 ISCA1Q9BUE6 129 aa15.82■□□□□ 0.12
DDX56-209ENST00000473924 TRMT112Q9UI30 125 aaKnown RBP15.82■□□□□ 0.12
DDX56-209ENST00000473924 ADCY9O60503 1353 aa15.82■□□□□ 0.12
DDX56-209ENST00000473924 IBTKQ9P2D0 1353 aaPredicted RBP15.82■□□□□ 0.12
DDX56-209ENST00000473924 PXDNLA1KZ92 1463 aa15.81■□□□□ 0.12
DDX56-209ENST00000473924 NTSR2O95665 410 aa15.81■□□□□ 0.12
DDX56-209ENST00000473924 DPEP1P16444 411 aa15.81■□□□□ 0.12
DDX56-209ENST00000473924 ERFEQ4G0M1 354 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms