RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 PHF14O94880 888 aa12.3□□□□□ -0.44
SMC4-213ENST00000472282 PLEKHO1Q53GL0 409 aaPredicted RBP12.3□□□□□ -0.44
SMC4-213ENST00000472282 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
SMC4-213ENST00000472282 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
SMC4-213ENST00000472282 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.29□□□□□ -0.44
SMC4-213ENST00000472282 ATP6V1AP38606 617 aa12.29□□□□□ -0.44
SMC4-213ENST00000472282 PLPP6Q8IY26 295 aa12.29□□□□□ -0.44
SMC4-213ENST00000472282 DCAF5Q96JK2 942 aa12.29□□□□□ -0.44
SMC4-213ENST00000472282 AK7Q96M32 723 aa12.29□□□□□ -0.44
SMC4-213ENST00000472282 KIF13BQ9NQT8 1826 aa12.28□□□□□ -0.44
SMC4-213ENST00000472282 ERVV-2B6SEH9 535 aa12.28□□□□□ -0.44
SMC4-213ENST00000472282 HMOX1P09601 288 aa12.28□□□□□ -0.44
SMC4-213ENST00000472282 SIPA1L3O60292 1781 aaPredicted RBP12.28□□□□□ -0.44
SMC4-213ENST00000472282 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
SMC4-213ENST00000472282 PPP2R1AP30153 589 aa12.27□□□□□ -0.45
SMC4-213ENST00000472282 AMOTQ4VCS5 1084 aa12.27□□□□□ -0.45
SMC4-213ENST00000472282 UBR2Q8IWV8 1755 aa12.27□□□□□ -0.45
SMC4-213ENST00000472282 GNPATO15228 680 aa12.26□□□□□ -0.45
SMC4-213ENST00000472282 HSP90AB1P08238 724 aaKnown RBP12.26□□□□□ -0.45
SMC4-213ENST00000472282 CABP4P57796 275 aa12.26□□□□□ -0.45
SMC4-213ENST00000472282 RALBP1Q15311 655 aa12.26□□□□□ -0.45
SMC4-213ENST00000472282 FLAD1Q8NFF5 587 aa12.26□□□□□ -0.45
SMC4-213ENST00000472282 MRC1P22897 1456 aa12.26□□□□□ -0.45
SMC4-213ENST00000472282 YBX3P16989 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMC4-213ENST00000472282 SSFA2P28290 1259 aa12.25□□□□□ -0.45
SMC4-213ENST00000472282 GPR162Q16538 588 aa12.25□□□□□ -0.45
SMC4-213ENST00000472282 C1orf141Q5JVX7 400 aa12.25□□□□□ -0.45
SMC4-213ENST00000472282 NFATC2IPQ8NCF5 419 aa12.25□□□□□ -0.45
SMC4-213ENST00000472282 LGR6Q9HBX8 967 aa12.25□□□□□ -0.45
SMC4-213ENST00000472282 BRCA1P38398 1863 aaKnown RBP12.24□□□□□ -0.45
SMC4-213ENST00000472282 PRKRIP1Q9H875 184 aaPredicted RBP12.24□□□□□ -0.45
SMC4-213ENST00000472282 KCPQ6ZWJ8 1503 aa12.23□□□□□ -0.45
SMC4-213ENST00000472282 MYBBP1AQ9BQG0 1328 aaKnown RBP12.23□□□□□ -0.45
SMC4-213ENST00000472282 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
SMC4-213ENST00000472282 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
SMC4-213ENST00000472282 PTCD1O75127 700 aaKnown RBP12.23□□□□□ -0.45
SMC4-213ENST00000472282 MTHFSDQ2M296 383 aaKnown RBP12.23□□□□□ -0.45
SMC4-213ENST00000472282 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
SMC4-213ENST00000472282 CNTNAP4Q9C0A0 1308 aa12.22□□□□□ -0.45
SMC4-213ENST00000472282 DSG2Q14126 1118 aa12.22□□□□□ -0.45
SMC4-213ENST00000472282 AKAP4Q5JQC9 854 aa12.22□□□□□ -0.45
SMC4-213ENST00000472282 CFAP53Q96M91 514 aa12.22□□□□□ -0.45
SMC4-213ENST00000472282 WWC3Q9ULE0 1092 aa12.22□□□□□ -0.45
SMC4-213ENST00000472282 AFDNP55196 1824 aaKnown RBP12.21□□□□□ -0.45
SMC4-213ENST00000472282 RNMTO43148 476 aaKnown RBP12.21□□□□□ -0.45
SMC4-213ENST00000472282 HMGB2P26583 209 aaKnown RBP12.21□□□□□ -0.45
SMC4-213ENST00000472282 CD2APQ9Y5K6 639 aa12.21□□□□□ -0.45
SMC4-213ENST00000472282 DLG5Q8TDM6 1919 aa12.21□□□□□ -0.46
SMC4-213ENST00000472282 RPS6KA4O75676 772 aa12.2□□□□□ -0.46
SMC4-213ENST00000472282 SLC39A6Q13433 755 aa12.2□□□□□ -0.46
SMC4-213ENST00000472282 PPP4R3BQ5MIZ7 849 aa12.2□□□□□ -0.46
SMC4-213ENST00000472282 RC3H1Q5TC82 1133 aaKnown RBP12.2□□□□□ -0.46
SMC4-213ENST00000472282 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
SMC4-213ENST00000472282 SLC52A2Q9HAB3 445 aa12.2□□□□□ -0.46
SMC4-213ENST00000472282 RTCBQ9Y3I0 505 aaKnown RBP12.2□□□□□ -0.46
SMC4-213ENST00000472282 U2SURPO15042 1029 aaKnown RBP12.19□□□□□ -0.46
SMC4-213ENST00000472282 ANP32CO43423 234 aa12.19□□□□□ -0.46
SMC4-213ENST00000472282 CRKLP46109 303 aaKnown RBP12.19□□□□□ -0.46
SMC4-213ENST00000472282 TRAPPC3LQ5T215 181 aa12.19□□□□□ -0.46
SMC4-213ENST00000472282 POTEEQ6S8J3 1075 aa12.19□□□□□ -0.46
SMC4-213ENST00000472282 PLA2G2EQ9NZK7 142 aa12.19□□□□□ -0.46
SMC4-213ENST00000472282 UTRNP46939 3433 aa12.18□□□□□ -0.46
SMC4-213ENST00000472282 MMP10P09238 476 aa12.18□□□□□ -0.46
SMC4-213ENST00000472282 GYS1P13807 737 aa12.18□□□□□ -0.46
SMC4-213ENST00000472282 INTS5Q6P9B9 1019 aaKnown RBP12.18□□□□□ -0.46
SMC4-213ENST00000472282 DNAJC10Q8IXB1 793 aa12.18□□□□□ -0.46
SMC4-213ENST00000472282 SRP68Q9UHB9 627 aaKnown RBP12.18□□□□□ -0.46
SMC4-213ENST00000472282 PXDNLA1KZ92 1463 aa12.18□□□□□ -0.46
SMC4-213ENST00000472282 ARFGEF1Q9Y6D6 1849 aa12.17□□□□□ -0.46
SMC4-213ENST00000472282 IL17REQ8NFR9 667 aa12.16□□□□□ -0.46
SMC4-213ENST00000472282 PHACTR3Q96KR7 559 aa12.16□□□□□ -0.46
SMC4-213ENST00000472282 NUDCQ9Y266 331 aa12.16□□□□□ -0.46
SMC4-213ENST00000472282 C10orf71Q711Q0 1435 aa12.16□□□□□ -0.46
SMC4-213ENST00000472282 NRXN2Q9P2S2 1712 aa12.16□□□□□ -0.46
SMC4-213ENST00000472282 RFC4P35249 363 aa12.15□□□□□ -0.46
SMC4-213ENST00000472282 ADGRD1Q6QNK2 874 aa12.15□□□□□ -0.46
SMC4-213ENST00000472282 RSPH6AQ9H0K4 717 aa12.15□□□□□ -0.46
SMC4-213ENST00000472282 USP42Q9H9J4 1324 aaKnown RBP12.14□□□□□ -0.47
SMC4-213ENST00000472282 TK2O00142 265 aa12.14□□□□□ -0.47
SMC4-213ENST00000472282 GRIN3BO60391 1043 aa12.14□□□□□ -0.47
SMC4-213ENST00000472282 CYP19A1P11511 503 aaPredicted RBP12.14□□□□□ -0.47
SMC4-213ENST00000472282 PRKAR2BP31323 418 aa12.14□□□□□ -0.47
SMC4-213ENST00000472282 NLGN1Q8N2Q7 840 aa12.14□□□□□ -0.47
SMC4-213ENST00000472282 CCDC87Q9NVE4 849 aa12.14□□□□□ -0.47
SMC4-213ENST00000472282 DLEC1Q9Y238 1755 aa12.14□□□□□ -0.47
SMC4-213ENST00000472282 SOS1Q07889 1333 aaPredicted RBP12.13□□□□□ -0.47
SMC4-213ENST00000472282 SCN7AQ01118 1682 aa12.13□□□□□ -0.47
SMC4-213ENST00000472282 ANKRD31Q8N7Z5 1873 aa12.13□□□□□ -0.47
SMC4-213ENST00000472282 U2AF1L5P0DN76 240 aaPredicted RBP12.13□□□□□ -0.47
SMC4-213ENST00000472282 U2AF1Q01081 240 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMC4-213ENST00000472282 DDR1Q08345 913 aa12.13□□□□□ -0.47
SMC4-213ENST00000472282 ZBTB1Q9Y2K1 713 aa12.13□□□□□ -0.47
SMC4-213ENST00000472282 BCORQ6W2J9 1755 aa12.13□□□□□ -0.47
SMC4-213ENST00000472282 A0A0G2JLW4 131 aa12.12□□□□□ -0.47
SMC4-213ENST00000472282 GNAT3A8MTJ3 354 aa12.12□□□□□ -0.47
SMC4-213ENST00000472282 PDE4AP27815 886 aa12.12□□□□□ -0.47
SMC4-213ENST00000472282 CCDC184Q52MB2 194 aa12.12□□□□□ -0.47
SMC4-213ENST00000472282 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
SMC4-213ENST00000472282 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
SMC4-213ENST00000472282 CRISPLD2Q9H0B8 497 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms