RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 CT47A1Q5JQC4 288 aaPredicted RBP14.47□□□□□ -0.09
IRF1-208ENST00000472045 LMBR1LQ6UX01 489 aa14.47□□□□□ -0.09
IRF1-208ENST00000472045 CTCFLQ8NI51 663 aaPredicted RBP14.47□□□□□ -0.09
IRF1-208ENST00000472045 ZC3H12CQ9C0D7 883 aaKnown RBP14.47□□□□□ -0.09
IRF1-208ENST00000472045 ZNF213O14771 459 aa14.46□□□□□ -0.09
IRF1-208ENST00000472045 ZNF804AQ7Z570 1209 aa14.46□□□□□ -0.09
IRF1-208ENST00000472045 C16orf71Q8IYS4 520 aaPredicted RBP14.46□□□□□ -0.09
IRF1-208ENST00000472045 EFCAB6Q5THR3 1501 aa14.46□□□□□ -0.09
IRF1-208ENST00000472045 ZGPATQ8N5A5 531 aaKnown RBP14.46□□□□□ -0.09
IRF1-208ENST00000472045 OFD1O75665 1012 aa14.46□□□□□ -0.09
IRF1-208ENST00000472045 PRIM1P49642 420 aaKnown RBP14.46□□□□□ -0.09
IRF1-208ENST00000472045 ATP2B3Q16720 1220 aa14.46□□□□□ -0.09
IRF1-208ENST00000472045 PLEKHG1Q9ULL1 1385 aa14.46□□□□□ -0.09
IRF1-208ENST00000472045 MLH3Q9UHC1 1453 aa14.46□□□□□ -0.09
IRF1-208ENST00000472045 PRPF40BQ6NWY9 871 aaKnown RBP14.46□□□□□ -0.1
IRF1-208ENST00000472045 KDM5DQ9BY66 1539 aa14.46□□□□□ -0.1
IRF1-208ENST00000472045 UGGT1Q9NYU2 1555 aa14.46□□□□□ -0.1
IRF1-208ENST00000472045 PLEKHG3A1L390 1219 aa14.45□□□□□ -0.1
IRF1-208ENST00000472045 CASTP20810 708 aaKnown RBP14.45□□□□□ -0.1
IRF1-208ENST00000472045 ZCCHC11Q5TAX3 1644 aaKnown RBP14.45□□□□□ -0.1
IRF1-208ENST00000472045 LARP1BQ659C4 914 aaKnown RBP14.45□□□□□ -0.1
IRF1-208ENST00000472045 CNBD1Q8NA66 436 aa14.45□□□□□ -0.1
IRF1-208ENST00000472045 C8orf58Q8NAV2 365 aa14.45□□□□□ -0.1
IRF1-208ENST00000472045 IRS4O14654 1257 aaPredicted RBP14.45□□□□□ -0.1
IRF1-208ENST00000472045 NSFL1CQ9UNZ2 370 aaKnown RBP14.45□□□□□ -0.1
IRF1-208ENST00000472045 F8W031 263 aaPredicted RBP14.45□□□□□ -0.1
IRF1-208ENST00000472045 TNIP1Q15025 636 aa14.45□□□□□ -0.1
IRF1-208ENST00000472045 EVI5LQ96CN4 794 aa14.45□□□□□ -0.1
IRF1-208ENST00000472045 EYA3Q99504 573 aa14.45□□□□□ -0.1
IRF1-208ENST00000472045 CCDC196A0A1B0GTZ2 297 aa14.45□□□□□ -0.1
IRF1-208ENST00000472045 FIBPO43427 364 aa14.44□□□□□ -0.1
IRF1-208ENST00000472045 ARHGAP45Q92619 1136 aa14.44□□□□□ -0.1
IRF1-208ENST00000472045 CRNKL1Q9BZJ0 848 aaKnown RBP14.44□□□□□ -0.1
IRF1-208ENST00000472045 LINS1Q8NG48 757 aa14.44□□□□□ -0.1
IRF1-208ENST00000472045 SSBP05455 408 aaKnown RBP eCLIP14.44□□□□□ -0.1
IRF1-208ENST00000472045 RBM17Q96I25 401 aaKnown RBP14.44□□□□□ -0.1
IRF1-208ENST00000472045 KAT6BQ8WYB5 2073 aa14.43□□□□□ -0.1
IRF1-208ENST00000472045 PDE4BQ07343 736 aa14.43□□□□□ -0.1
IRF1-208ENST00000472045 IQSEC3Q9UPP2 1182 aaPredicted RBP14.43□□□□□ -0.1
IRF1-208ENST00000472045 ODF2Q5BJF6 829 aa14.43□□□□□ -0.1
IRF1-208ENST00000472045 C20orf194Q5TEA3 1177 aa14.43□□□□□ -0.1
IRF1-208ENST00000472045 CUL5Q93034 780 aa14.43□□□□□ -0.1
IRF1-208ENST00000472045 IL15P40933 162 aaPredicted RBP14.43□□□□□ -0.1
IRF1-208ENST00000472045 PHACTR3Q96KR7 559 aa14.43□□□□□ -0.1
IRF1-208ENST00000472045 BMP2KQ9NSY1 1161 aaPredicted RBP14.43□□□□□ -0.1
IRF1-208ENST00000472045 TRPC5Q9UL62 973 aaPredicted RBP14.43□□□□□ -0.1
IRF1-208ENST00000472045 ME1P48163 572 aa14.43□□□□□ -0.1
IRF1-208ENST00000472045 FAM13BQ9NYF5 915 aa14.43□□□□□ -0.1
IRF1-208ENST00000472045 NF2P35240 595 aa14.42□□□□□ -0.1
IRF1-208ENST00000472045 ZNF790Q6PG37 636 aa14.42□□□□□ -0.1
IRF1-208ENST00000472045 MAGEC2Q9UBF1 373 aaPredicted RBP14.42□□□□□ -0.1
IRF1-208ENST00000472045 SAMD9LQ8IVG5 1584 aa14.42□□□□□ -0.1
IRF1-208ENST00000472045 GRM1Q13255 1194 aa14.42□□□□□ -0.1
IRF1-208ENST00000472045 MAGI3Q5TCQ9 1506 aa14.42□□□□□ -0.1
IRF1-208ENST00000472045 QTRT2Q9H974 415 aaKnown RBP14.42□□□□□ -0.1
IRF1-208ENST00000472045 CHMP4BP1P59074 171 aa14.42□□□□□ -0.1
IRF1-208ENST00000472045 WDR33Q9C0J8 1336 aaKnown RBP14.41□□□□□ -0.1
IRF1-208ENST00000472045 IFIT3O14879 490 aaKnown RBP14.41□□□□□ -0.1
IRF1-208ENST00000472045 HMGB1P09429 215 aaKnown RBP14.41□□□□□ -0.1
IRF1-208ENST00000472045 ANKRD2Q9GZV1 360 aa14.41□□□□□ -0.1
IRF1-208ENST00000472045 SLC12A7Q9Y666 1083 aa14.41□□□□□ -0.1
IRF1-208ENST00000472045 PLEKHH1Q9ULM0 1364 aa14.41□□□□□ -0.1
IRF1-208ENST00000472045 LMOD1P29536 600 aaPredicted RBP14.41□□□□□ -0.1
IRF1-208ENST00000472045 ZNF772Q68DY9 489 aaPredicted RBP14.41□□□□□ -0.1
IRF1-208ENST00000472045 NLRP1Q9C000 1473 aa14.41□□□□□ -0.1
IRF1-208ENST00000472045 MBD5Q9P267 1494 aa14.41□□□□□ -0.1
IRF1-208ENST00000472045 K7ELQ4 463 aaPredicted RBP14.41□□□□□ -0.1
IRF1-208ENST00000472045 MYCNP04198 464 aaPredicted RBP14.41□□□□□ -0.1
IRF1-208ENST00000472045 CCAR2Q8N163 923 aaKnown RBP14.41□□□□□ -0.1
IRF1-208ENST00000472045 MEIS3Q99687 375 aa14.41□□□□□ -0.1
IRF1-208ENST00000472045 RSPH6AQ9H0K4 717 aa14.41□□□□□ -0.1
IRF1-208ENST00000472045 PARD3Q8TEW0 1356 aa14.41□□□□□ -0.1
IRF1-208ENST00000472045 TSPY2A6NKD2 308 aa14.41□□□□□ -0.1
IRF1-208ENST00000472045 NAP1L1P55209 391 aaKnown RBP14.41□□□□□ -0.1
IRF1-208ENST00000472045 PARP10Q53GL7 1025 aa14.41□□□□□ -0.1
IRF1-208ENST00000472045 CCDC70Q6NSX1 233 aa14.41□□□□□ -0.1
IRF1-208ENST00000472045 TTC37Q6PGP7 1564 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 HECW2Q9P2P5 1572 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 CYP7A1P22680 504 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 SLC4A8Q2Y0W8 1093 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 CATIPQ7Z7H3 387 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 RHPN1Q8TCX5 695 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 CCDC87Q9NVE4 849 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 CFAP65Q6ZU64 1925 aaKnown RBP14.4□□□□□ -0.1
IRF1-208ENST00000472045 KDM6BO15054 1643 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 RIMBP2O15034 1052 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 RBM26Q5T8P6 1007 aaKnown RBP14.4□□□□□ -0.1
IRF1-208ENST00000472045 DDX11Q96FC9 970 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 KRT85P78386 507 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 STIM1Q13586 685 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 SLC52A2Q9HAB3 445 aa14.4□□□□□ -0.1
IRF1-208ENST00000472045 DDX21Q9NR30 783 aaKnown RBP eCLIP14.4□□□□□ -0.1
IRF1-208ENST00000472045 EHMT1Q9H9B1 1298 aa14.39□□□□□ -0.11
IRF1-208ENST00000472045 VEZTQ9HBM0 779 aa14.39□□□□□ -0.11
IRF1-208ENST00000472045 ZNF335Q9H4Z2 1342 aaPredicted RBP14.39□□□□□ -0.11
IRF1-208ENST00000472045 MRPL50Q8N5N7 158 aaKnown RBP14.39□□□□□ -0.11
IRF1-208ENST00000472045 MBD3O95983 291 aa14.39□□□□□ -0.11
IRF1-208ENST00000472045 IBSPP21815 317 aaPredicted RBP14.39□□□□□ -0.11
IRF1-208ENST00000472045 ZFYVE27Q5T4F4 411 aa14.39□□□□□ -0.11
IRF1-208ENST00000472045 IL13P35225 146 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms