RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 RHPN1Q8TCX5 695 aa10.27□□□□□ -0.77
CD46-213ENST00000471987 RRAGCQ9HB90 399 aa10.27□□□□□ -0.77
CD46-213ENST00000471987 MARK1Q9P0L2 795 aa10.27□□□□□ -0.77
CD46-213ENST00000471987 HCN2Q9UL51 889 aa10.27□□□□□ -0.77
CD46-213ENST00000471987 MKL2Q9ULH7 1088 aa10.27□□□□□ -0.77
CD46-213ENST00000471987 NEURL1BA8MQ27 555 aa10.26□□□□□ -0.77
CD46-213ENST00000471987 EFSO43281 561 aa10.26□□□□□ -0.77
CD46-213ENST00000471987 EPXP11678 715 aa10.26□□□□□ -0.77
CD46-213ENST00000471987 ADH6P28332 368 aa10.26□□□□□ -0.77
CD46-213ENST00000471987 SNRPNP63162 240 aaKnown RBP10.26□□□□□ -0.77
CD46-213ENST00000471987 SH3PXD2AQ5TCZ1 1133 aa10.26□□□□□ -0.77
CD46-213ENST00000471987 POTEAQ6S8J7 498 aa10.26□□□□□ -0.77
CD46-213ENST00000471987 C7orf43Q8WVR3 580 aa10.26□□□□□ -0.77
CD46-213ENST00000471987 PPP1R12BO60237 982 aaPredicted RBP10.25□□□□□ -0.77
CD46-213ENST00000471987 PRR12Q9ULL5 1215 aa10.25□□□□□ -0.77
CD46-213ENST00000471987 IGHA1P01876 353 aa10.24□□□□□ -0.77
CD46-213ENST00000471987 DCAF5Q96JK2 942 aa10.24□□□□□ -0.77
CD46-213ENST00000471987 HCN4Q9Y3Q4 1203 aa10.24□□□□□ -0.77
CD46-213ENST00000471987 KANK4Q5T7N3 995 aaPredicted RBP10.23□□□□□ -0.77
CD46-213ENST00000471987 ZNF468Q5VIY5 522 aaPredicted RBP10.23□□□□□ -0.77
CD46-213ENST00000471987 GPAT2Q6NUI2 795 aa10.23□□□□□ -0.77
CD46-213ENST00000471987 GAS2L2Q8NHY3 880 aa10.23□□□□□ -0.77
CD46-213ENST00000471987 BTBD6Q96KE9 485 aa10.23□□□□□ -0.77
CD46-213ENST00000471987 PHACTR1Q9C0D0 580 aa10.23□□□□□ -0.77
CD46-213ENST00000471987 STRN4Q9NRL3 753 aa10.23□□□□□ -0.77
CD46-213ENST00000471987 ANKIB1Q9P2G1 1089 aa10.23□□□□□ -0.77
CD46-213ENST00000471987 PIK3R2O00459 728 aa10.22□□□□□ -0.77
CD46-213ENST00000471987 C21orf2O43822 256 aa10.22□□□□□ -0.77
CD46-213ENST00000471987 LMOD1P29536 600 aaPredicted RBP10.22□□□□□ -0.77
CD46-213ENST00000471987 PTK7Q13308 1070 aa10.22□□□□□ -0.77
CD46-213ENST00000471987 CRTC2Q53ET0 693 aaPredicted RBP10.22□□□□□ -0.77
CD46-213ENST00000471987 STAG2Q8N3U4 1231 aa10.22□□□□□ -0.77
CD46-213ENST00000471987 VRTNQ9H8Y1 702 aa10.22□□□□□ -0.77
CD46-213ENST00000471987 ATAD2Q6PL18 1390 aa10.22□□□□□ -0.77
CD46-213ENST00000471987 FAM196BA6NMK8 535 aa10.21□□□□□ -0.77
CD46-213ENST00000471987 SCG3Q8WXD2 468 aaKnown RBP10.21□□□□□ -0.77
CD46-213ENST00000471987 KLF15Q9UIH9 416 aa10.21□□□□□ -0.77
CD46-213ENST00000471987 PCBP4P57723 403 aaKnown RBP10.2□□□□□ -0.78
CD46-213ENST00000471987 DPYDQ12882 1025 aa10.2□□□□□ -0.78
CD46-213ENST00000471987 FCHSD1Q86WN1 690 aa10.2□□□□□ -0.78
CD46-213ENST00000471987 HINFPQ9BQA5 517 aa10.2□□□□□ -0.78
CD46-213ENST00000471987 USP17L15C9J2P7 530 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 USP17L10C9JJH3 530 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 USP17L13C9JLJ4 530 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 USP17L12C9JPN9 530 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 USP17L11C9JVI0 530 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 USP17L21D6R901 530 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 USP17L18D6R9N7 530 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 USP17L22D6RA61 530 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 USP17L17D6RBQ6 530 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 USP17L19D6RCP7 530 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 USP17L20D6RJB6 530 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 HOXB4P17483 251 aaPredicted RBP10.19□□□□□ -0.78
CD46-213ENST00000471987 USP17L24Q0WX57 530 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 ALYREFQ86V81 257 aaKnown RBP10.19□□□□□ -0.78
CD46-213ENST00000471987 ANKMY2Q8IV38 441 aa10.19□□□□□ -0.78
CD46-213ENST00000471987 C2orf49Q9BVC5 232 aaPredicted RBP10.19□□□□□ -0.78
CD46-213ENST00000471987 ZNF777Q9ULD5 760 aaPredicted RBP10.19□□□□□ -0.78
CD46-213ENST00000471987 HIF1AQ16665 826 aa10.18□□□□□ -0.78
CD46-213ENST00000471987 LINC00114Q6XXX2 140 aa10.18□□□□□ -0.78
CD46-213ENST00000471987 CHSY3Q70JA7 882 aa10.18□□□□□ -0.78
CD46-213ENST00000471987 ALDH16A1Q8IZ83 802 aa10.18□□□□□ -0.78
CD46-213ENST00000471987 CHMP7Q8WUX9 453 aaPredicted RBP10.18□□□□□ -0.78
CD46-213ENST00000471987 HSH2DQ96JZ2 352 aa10.18□□□□□ -0.78
CD46-213ENST00000471987 GNB5O14775 395 aa10.17□□□□□ -0.78
CD46-213ENST00000471987 DGKGP49619 791 aa10.17□□□□□ -0.78
CD46-213ENST00000471987 SFSWAPQ12872 951 aaKnown RBP10.17□□□□□ -0.78
CD46-213ENST00000471987 PLA2G4EQ3MJ16 856 aa10.17□□□□□ -0.78
CD46-213ENST00000471987 SUSD3Q96L08 255 aa10.17□□□□□ -0.78
CD46-213ENST00000471987 CEP63Q96MT8 703 aa10.17□□□□□ -0.78
CD46-213ENST00000471987 SYT9Q86SS6 491 aa10.16□□□□□ -0.78
CD46-213ENST00000471987 BRD7Q9NPI1 651 aa10.16□□□□□ -0.78
CD46-213ENST00000471987 SIN3BO75182 1162 aa10.15□□□□□ -0.78
CD46-213ENST00000471987 IGFBP4P22692 258 aa10.15□□□□□ -0.78
CD46-213ENST00000471987 NEUROD1Q13562 356 aa10.15□□□□□ -0.78
CD46-213ENST00000471987 CFAP70Q5T0N1 1121 aa10.15□□□□□ -0.78
CD46-213ENST00000471987 ZNF280CQ8ND82 737 aa10.15□□□□□ -0.78
CD46-213ENST00000471987 ELOA3CA0A087WX78 387 aaPredicted RBP10.14□□□□□ -0.79
CD46-213ENST00000471987 ELOA3DA6NLF2 546 aaPredicted RBP10.14□□□□□ -0.79
CD46-213ENST00000471987 ALAS2P22557 587 aa10.14□□□□□ -0.79
CD46-213ENST00000471987 KCNQ4P56696 695 aa10.14□□□□□ -0.79
CD46-213ENST00000471987 TYRO3Q06418 890 aa10.14□□□□□ -0.79
CD46-213ENST00000471987 SPEM2Q0P670 501 aa10.14□□□□□ -0.79
CD46-213ENST00000471987 ELOA3BQ3SY89 546 aa10.14□□□□□ -0.79
CD46-213ENST00000471987 ELOA3Q8NG57 546 aa10.14□□□□□ -0.79
CD46-213ENST00000471987 NGLY1Q96IV0 654 aa10.14□□□□□ -0.79
CD46-213ENST00000471987 NOP53Q9NZM5 478 aaKnown RBP10.14□□□□□ -0.79
CD46-213ENST00000471987 MSTNO14793 375 aa10.13□□□□□ -0.79
CD46-213ENST00000471987 COL8A1P27658 744 aa10.13□□□□□ -0.79
CD46-213ENST00000471987 GRIN2CQ14957 1233 aa10.13□□□□□ -0.79
CD46-213ENST00000471987 SLC30A3Q99726 388 aa10.13□□□□□ -0.79
CD46-213ENST00000471987 KCNH4Q9UQ05 1017 aa10.13□□□□□ -0.79
CD46-213ENST00000471987 RTN1Q16799 776 aa10.12□□□□□ -0.79
CD46-213ENST00000471987 ARXQ96QS3 562 aa10.12□□□□□ -0.79
CD46-213ENST00000471987 SUV39H2Q9H5I1 410 aa10.12□□□□□ -0.79
CD46-213ENST00000471987 ADARB2-AS1A8MUL3 147 aa10.11□□□□□ -0.79
CD46-213ENST00000471987 LGR5O75473 907 aa10.11□□□□□ -0.79
CD46-213ENST00000471987 BTLAQ7Z6A9 289 aa10.11□□□□□ -0.79
CD46-213ENST00000471987 KRBA1A5PL33 1030 aa10.1□□□□□ -0.79
CD46-213ENST00000471987 ITGB2P05107 769 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms