RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 PARD3Q8TEW0 1356 aa5.99□□□□□ -1.45
LRCH3-213ENST00000471667 ZBTB33Q86T24 672 aa5.99□□□□□ -1.45
LRCH3-213ENST00000471667 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.99□□□□□ -1.45
LRCH3-213ENST00000471667 KDM4CQ9H3R0 1056 aa5.99□□□□□ -1.45
LRCH3-213ENST00000471667 GPBP1L1Q9HC44 474 aaPredicted RBP5.99□□□□□ -1.45
LRCH3-213ENST00000471667 CDV3Q9UKY7 258 aaKnown RBP5.99□□□□□ -1.45
LRCH3-213ENST00000471667 CDC42BPBQ9Y5S2 1711 aa5.99□□□□□ -1.45
LRCH3-213ENST00000471667 ZC3H4Q9UPT8 1303 aaKnown RBP5.99□□□□□ -1.45
LRCH3-213ENST00000471667 CAMSAP2Q08AD1 1489 aa5.98□□□□□ -1.45
LRCH3-213ENST00000471667 RPRD2Q5VT52 1461 aaKnown RBP5.98□□□□□ -1.45
LRCH3-213ENST00000471667 FIGNL2A6NMB9 653 aa5.98□□□□□ -1.45
LRCH3-213ENST00000471667 SPINT1O43278 529 aa5.98□□□□□ -1.45
LRCH3-213ENST00000471667 PTSQ03393 145 aa5.98□□□□□ -1.45
LRCH3-213ENST00000471667 PPP2R2DQ66LE6 453 aa5.98□□□□□ -1.45
LRCH3-213ENST00000471667 Q6ZVU0 165 aa5.98□□□□□ -1.45
LRCH3-213ENST00000471667 UNC5CLQ8IV45 518 aa5.98□□□□□ -1.45
LRCH3-213ENST00000471667 OCSTAMPQ9BR26 566 aa5.98□□□□□ -1.45
LRCH3-213ENST00000471667 FAM117AQ9C073 453 aa5.98□□□□□ -1.45
LRCH3-213ENST00000471667 CFDP1Q9UEE9 299 aaPredicted RBP5.98□□□□□ -1.45
LRCH3-213ENST00000471667 UBR1Q8IWV7 1749 aa5.98□□□□□ -1.45
LRCH3-213ENST00000471667 DCCP43146 1447 aa5.98□□□□□ -1.45
LRCH3-213ENST00000471667 AP1G2O75843 785 aa5.97□□□□□ -1.45
LRCH3-213ENST00000471667 PTK2Q05397 1052 aa5.97□□□□□ -1.45
LRCH3-213ENST00000471667 DHX9Q08211 1270 aaKnown RBP5.97□□□□□ -1.45
LRCH3-213ENST00000471667 INTS6LQ5JSJ4 861 aaKnown RBP5.97□□□□□ -1.45
LRCH3-213ENST00000471667 COL13A1Q5TAT6 717 aaPredicted RBP5.97□□□□□ -1.45
LRCH3-213ENST00000471667 DDRGK1Q96HY6 314 aa5.97□□□□□ -1.45
LRCH3-213ENST00000471667 GPATCH8Q9UKJ3 1502 aaKnown RBP5.97□□□□□ -1.45
LRCH3-213ENST00000471667 EZH2Q15910 746 aaKnown RBP5.96□□□□□ -1.46
LRCH3-213ENST00000471667 GPR162Q16538 588 aa5.96□□□□□ -1.46
LRCH3-213ENST00000471667 GPR161Q8N6U8 529 aaKnown RBP5.96□□□□□ -1.46
LRCH3-213ENST00000471667 ADAM32Q8TC27 787 aa5.96□□□□□ -1.46
LRCH3-213ENST00000471667 AGBL1Q96MI9 1066 aa5.96□□□□□ -1.46
LRCH3-213ENST00000471667 WWC3Q9ULE0 1092 aa5.96□□□□□ -1.46
LRCH3-213ENST00000471667 GPSM3Q9Y4H4 160 aa5.96□□□□□ -1.46
LRCH3-213ENST00000471667 DISP2A7MBM2 1401 aa5.96□□□□□ -1.46
LRCH3-213ENST00000471667 ADGRB2O60241 1585 aa5.96□□□□□ -1.46
LRCH3-213ENST00000471667 KRT76Q01546 638 aa5.95□□□□□ -1.46
LRCH3-213ENST00000471667 EPS8L1Q8TE68 723 aa5.95□□□□□ -1.46
LRCH3-213ENST00000471667 MAST1Q9Y2H9 1570 aa5.95□□□□□ -1.46
LRCH3-213ENST00000471667 CEP350Q5VT06 3117 aa5.94□□□□□ -1.46
LRCH3-213ENST00000471667 EFCAB6Q5THR3 1501 aa5.94□□□□□ -1.46
LRCH3-213ENST00000471667 RELBQ01201 579 aa5.94□□□□□ -1.46
LRCH3-213ENST00000471667 NBPF20Q3BBV1 942 aa5.94□□□□□ -1.46
LRCH3-213ENST00000471667 CCDC155Q8N6L0 562 aa5.94□□□□□ -1.46
LRCH3-213ENST00000471667 PNMA1Q8ND90 353 aa5.94□□□□□ -1.46
LRCH3-213ENST00000471667 CNTNAP3BQ96NU0 1288 aa5.94□□□□□ -1.46
LRCH3-213ENST00000471667 INSM2Q96T92 566 aaPredicted RBP5.94□□□□□ -1.46
LRCH3-213ENST00000471667 CNTNAP3Q9BZ76 1288 aa5.94□□□□□ -1.46
LRCH3-213ENST00000471667 HMX1Q9NP08 348 aaPredicted RBP5.94□□□□□ -1.46
LRCH3-213ENST00000471667 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.94□□□□□ -1.46
LRCH3-213ENST00000471667 SLC35F4A4IF30 521 aa5.93□□□□□ -1.46
LRCH3-213ENST00000471667 USP17L8P0C7I0 530 aa5.93□□□□□ -1.46
LRCH3-213ENST00000471667 CTSOP43234 321 aaPredicted RBP5.93□□□□□ -1.46
LRCH3-213ENST00000471667 RAB15P59190 212 aa5.93□□□□□ -1.46
LRCH3-213ENST00000471667 NANOS1Q8WY41 292 aaKnown RBP5.93□□□□□ -1.46
LRCH3-213ENST00000471667 CAMTA1Q9Y6Y1 1673 aa5.93□□□□□ -1.46
LRCH3-213ENST00000471667 RGPD1P0DJD0 1748 aa5.93□□□□□ -1.46
LRCH3-213ENST00000471667 TET3O43151 1660 aa5.92□□□□□ -1.46
LRCH3-213ENST00000471667 CHD4Q14839 1912 aa5.92□□□□□ -1.46
LRCH3-213ENST00000471667 CCDC18Q5T9S5 1454 aa5.92□□□□□ -1.46
LRCH3-213ENST00000471667 FYCO1Q9BQS8 1478 aa5.92□□□□□ -1.46
LRCH3-213ENST00000471667 APBA3O96018 575 aa5.92□□□□□ -1.46
LRCH3-213ENST00000471667 VPS72Q15906 364 aa5.92□□□□□ -1.46
LRCH3-213ENST00000471667 SYT17Q9BSW7 474 aa5.92□□□□□ -1.46
LRCH3-213ENST00000471667 COL25A1Q9BXS0 654 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-213ENST00000471667 ZNF395Q9H8N7 513 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-213ENST00000471667 POLMQ9NP87 494 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-213ENST00000471667 TMPRSS4Q9NRS4 437 aa5.92□□□□□ -1.46
LRCH3-213ENST00000471667 TBX22Q9Y458 520 aa5.92□□□□□ -1.46
LRCH3-213ENST00000471667 CCNB3Q8WWL7 1395 aa5.92□□□□□ -1.46
LRCH3-213ENST00000471667 PIK3R4Q99570 1358 aa5.92□□□□□ -1.46
LRCH3-213ENST00000471667 MST1RQ04912 1400 aa5.91□□□□□ -1.46
LRCH3-213ENST00000471667 ADH1AP07327 375 aa5.91□□□□□ -1.46
LRCH3-213ENST00000471667 ITGA6P23229 1130 aa5.91□□□□□ -1.46
LRCH3-213ENST00000471667 DZIP3Q86Y13 1208 aaKnown RBP5.91□□□□□ -1.46
LRCH3-213ENST00000471667 DDX17Q92841 729 aaKnown RBP5.91□□□□□ -1.46
LRCH3-213ENST00000471667 CAMKK2Q96RR4 588 aa5.91□□□□□ -1.46
LRCH3-213ENST00000471667 FHDC1Q9C0D6 1143 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-213ENST00000471667 PLEKHG1Q9ULL1 1385 aa5.91□□□□□ -1.46
LRCH3-213ENST00000471667 DLC1Q96QB1 1528 aa5.9□□□□□ -1.46
LRCH3-213ENST00000471667 ERVH48-1M5A8F1 160 aa5.9□□□□□ -1.46
LRCH3-213ENST00000471667 LILRA1O75019 489 aa5.9□□□□□ -1.46
LRCH3-213ENST00000471667 TSPY4P0CV99 314 aa5.9□□□□□ -1.46
LRCH3-213ENST00000471667 TSPY10P0CW01 314 aa5.9□□□□□ -1.46
LRCH3-213ENST00000471667 RFC5P40937 340 aa5.9□□□□□ -1.46
LRCH3-213ENST00000471667 KCNMA1Q12791 1236 aa5.9□□□□□ -1.46
LRCH3-213ENST00000471667 RNFT1Q5M7Z0 435 aa5.9□□□□□ -1.46
LRCH3-213ENST00000471667 FAM196AQ6ZSG2 479 aa5.9□□□□□ -1.46
LRCH3-213ENST00000471667 VWA5B2Q8N398 1253 aa5.9□□□□□ -1.46
LRCH3-213ENST00000471667 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.9□□□□□ -1.46
LRCH3-213ENST00000471667 RNF217Q8TC41 542 aa5.9□□□□□ -1.46
LRCH3-213ENST00000471667 GLI3P10071 1580 aa5.89□□□□□ -1.47
LRCH3-213ENST00000471667 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.89□□□□□ -1.47
LRCH3-213ENST00000471667 CDC14CA4D256 554 aa5.89□□□□□ -1.47
LRCH3-213ENST00000471667 ESPNB1AK53 854 aa5.89□□□□□ -1.47
LRCH3-213ENST00000471667 GRIN3BO60391 1043 aa5.89□□□□□ -1.47
LRCH3-213ENST00000471667 ADD1P35611 737 aaKnown RBP5.89□□□□□ -1.47
LRCH3-213ENST00000471667 GSK3AP49840 483 aa5.89□□□□□ -1.47
LRCH3-213ENST00000471667 AMOTL2Q9Y2J4 779 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms