RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CACNA1FO60840 1977 aa19.26■□□□□ 0.67
CDC42SE1-203ENST00000470278 ELL2O00472 640 aaPredicted RBP19.26■□□□□ 0.67
CDC42SE1-203ENST00000470278 DDX21Q9NR30 783 aaKnown RBP eCLIP19.26■□□□□ 0.67
CDC42SE1-203ENST00000470278 DBF4Q9UBU7 674 aaPredicted RBP19.26■□□□□ 0.67
CDC42SE1-203ENST00000470278 RGL2O15211 777 aa19.25■□□□□ 0.67
CDC42SE1-203ENST00000470278 MMP10P09238 476 aa19.25■□□□□ 0.67
CDC42SE1-203ENST00000470278 RFC4P35249 363 aa19.25■□□□□ 0.67
CDC42SE1-203ENST00000470278 PIP4K2AP48426 406 aaPredicted RBP19.25■□□□□ 0.67
CDC42SE1-203ENST00000470278 CCDC30Q5VVM6 783 aa19.25■□□□□ 0.67
CDC42SE1-203ENST00000470278 CHPF2Q9P2E5 772 aa19.25■□□□□ 0.67
CDC42SE1-203ENST00000470278 VAMP4O75379 141 aa19.24■□□□□ 0.67
CDC42SE1-203ENST00000470278 NPM2Q86SE8 214 aaKnown RBP19.24■□□□□ 0.67
CDC42SE1-203ENST00000470278 NARFQ9UHQ1 456 aa19.24■□□□□ 0.67
CDC42SE1-203ENST00000470278 CT47B1P0C2W7 299 aaPredicted RBP19.23■□□□□ 0.67
CDC42SE1-203ENST00000470278 PROSER3Q2NL68 480 aa19.23■□□□□ 0.67
CDC42SE1-203ENST00000470278 AFDNP55196 1824 aaKnown RBP19.23■□□□□ 0.67
CDC42SE1-203ENST00000470278 GYS1P13807 737 aa19.22■□□□□ 0.67
CDC42SE1-203ENST00000470278 MYL6BP14649 208 aa19.22■□□□□ 0.67
CDC42SE1-203ENST00000470278 DZIP3Q86Y13 1208 aaKnown RBP19.22■□□□□ 0.67
CDC42SE1-203ENST00000470278 NECTIN2Q92692 538 aa19.22■□□□□ 0.67
CDC42SE1-203ENST00000470278 ZNF428Q96B54 188 aa19.22■□□□□ 0.67
CDC42SE1-203ENST00000470278 HYPKQ9NX55 129 aa19.22■□□□□ 0.67
CDC42SE1-203ENST00000470278 ZNF330Q9Y3S2 320 aaPredicted RBP19.22■□□□□ 0.67
CDC42SE1-203ENST00000470278 ZPR1O75312 459 aa19.21■□□□□ 0.67
CDC42SE1-203ENST00000470278 SBF1O95248 1867 aa19.21■□□□□ 0.67
CDC42SE1-203ENST00000470278 NRXN2Q9P2S2 1712 aa19.2■□□□□ 0.66
CDC42SE1-203ENST00000470278 CAMTA2O94983 1202 aa19.2■□□□□ 0.66
CDC42SE1-203ENST00000470278 STK31Q9BXU1 1019 aa19.2■□□□□ 0.66
CDC42SE1-203ENST00000470278 SRP68Q9UHB9 627 aaKnown RBP19.2■□□□□ 0.66
CDC42SE1-203ENST00000470278 DLEC1Q9Y238 1755 aa19.19■□□□□ 0.66
CDC42SE1-203ENST00000470278 ANXA1P04083 346 aa19.19■□□□□ 0.66
CDC42SE1-203ENST00000470278 USPL1Q5W0Q7 1092 aa19.19■□□□□ 0.66
CDC42SE1-203ENST00000470278 NLGN1Q8N2Q7 840 aa19.19■□□□□ 0.66
CDC42SE1-203ENST00000470278 MAP3K15Q6ZN16 1313 aa19.19■□□□□ 0.66
CDC42SE1-203ENST00000470278 ANKRD36CQ5JPF3 1778 aa19.19■□□□□ 0.66
CDC42SE1-203ENST00000470278 ARFGEF2Q9Y6D5 1785 aa19.19■□□□□ 0.66
CDC42SE1-203ENST00000470278 ERVV-1B6SEH8 477 aa19.18■□□□□ 0.66
CDC42SE1-203ENST00000470278 KIF3CO14782 793 aa19.18■□□□□ 0.66
CDC42SE1-203ENST00000470278 CLEC4GQ6UXB4 293 aa19.18■□□□□ 0.66
CDC42SE1-203ENST00000470278 KIF6Q6ZMV9 814 aa19.18■□□□□ 0.66
CDC42SE1-203ENST00000470278 ZNF526Q8TF50 670 aaPredicted RBP19.18■□□□□ 0.66
CDC42SE1-203ENST00000470278 BCL2L12Q9HB09 334 aa19.18■□□□□ 0.66
CDC42SE1-203ENST00000470278 TBC1D2BQ9UPU7 963 aa19.18■□□□□ 0.66
CDC42SE1-203ENST00000470278 NUP98P52948 1817 aa19.18■□□□□ 0.66
CDC42SE1-203ENST00000470278 KCNA3P22001 575 aa19.17■□□□□ 0.66
CDC42SE1-203ENST00000470278 TTLL7Q6ZT98 887 aa19.17■□□□□ 0.66
CDC42SE1-203ENST00000470278 ZNF652Q9Y2D9 606 aa19.17■□□□□ 0.66
CDC42SE1-203ENST00000470278 A0A0G2JLW4 131 aa19.16■□□□□ 0.66
CDC42SE1-203ENST00000470278 DDR1Q08345 913 aa19.16■□□□□ 0.66
CDC42SE1-203ENST00000470278 FKBP8Q14318 412 aa19.16■□□□□ 0.66
CDC42SE1-203ENST00000470278 COPS6Q7L5N1 327 aa19.16■□□□□ 0.66
CDC42SE1-203ENST00000470278 XAGE3Q8WTP9 111 aa19.16■□□□□ 0.66
CDC42SE1-203ENST00000470278 GPBP1L1Q9HC44 474 aaPredicted RBP19.16■□□□□ 0.66
CDC42SE1-203ENST00000470278 ALDH1L2Q3SY69 923 aa19.15■□□□□ 0.66
CDC42SE1-203ENST00000470278 SLC4A2P04920 1241 aa19.14■□□□□ 0.65
CDC42SE1-203ENST00000470278 DPEP1P16444 411 aa19.14■□□□□ 0.65
CDC42SE1-203ENST00000470278 GIGYF2Q6Y7W6 1299 aaKnown RBP19.13■□□□□ 0.65
CDC42SE1-203ENST00000470278 PLBD2Q8NHP8 589 aa19.13■□□□□ 0.65
CDC42SE1-203ENST00000470278 PHAXQ9H814 394 aaKnown RBP19.13■□□□□ 0.65
CDC42SE1-203ENST00000470278 ANKRD31Q8N7Z5 1873 aa19.13■□□□□ 0.65
CDC42SE1-203ENST00000470278 CARMIL3Q8ND23 1372 aa19.12■□□□□ 0.65
CDC42SE1-203ENST00000470278 TM4SF1P30408 202 aa19.12■□□□□ 0.65
CDC42SE1-203ENST00000470278 TGFB2P61812 414 aa19.12■□□□□ 0.65
CDC42SE1-203ENST00000470278 AIMP1Q12904 312 aaKnown RBP19.12■□□□□ 0.65
CDC42SE1-203ENST00000470278 FLIIQ13045 1269 aa19.12■□□□□ 0.65
CDC42SE1-203ENST00000470278 ZBTB3Q9H5J0 574 aa19.12■□□□□ 0.65
CDC42SE1-203ENST00000470278 TCERG1O14776 1098 aaKnown RBP19.11■□□□□ 0.65
CDC42SE1-203ENST00000470278 DDX58O95786 925 aaKnown RBP19.11■□□□□ 0.65
CDC42SE1-203ENST00000470278 BRPF1P55201 1214 aaPredicted RBP19.11■□□□□ 0.65
CDC42SE1-203ENST00000470278 NFIXQ14938 502 aa19.11■□□□□ 0.65
CDC42SE1-203ENST00000470278 HLFQ16534 295 aa19.11■□□□□ 0.65
CDC42SE1-203ENST00000470278 ANKRD13DQ6ZTN6 518 aa19.11■□□□□ 0.65
CDC42SE1-203ENST00000470278 SSH1Q8WYL5 1049 aa19.11■□□□□ 0.65
CDC42SE1-203ENST00000470278 YTHDC1Q96MU7 727 aaKnown RBP19.11■□□□□ 0.65
CDC42SE1-203ENST00000470278 IBTKQ9P2D0 1353 aaPredicted RBP19.1■□□□□ 0.65
CDC42SE1-203ENST00000470278 HSPA6P17066 643 aa19.1■□□□□ 0.65
CDC42SE1-203ENST00000470278 HSP90AB3PQ58FF7 597 aa19.1■□□□□ 0.65
CDC42SE1-203ENST00000470278 TBC1D9BQ66K14 1250 aa19.1■□□□□ 0.65
CDC42SE1-203ENST00000470278 CCDC88AQ3V6T2 1871 aa19.09■□□□□ 0.65
CDC42SE1-203ENST00000470278 POLRMTO00411 1230 aaKnown RBP19.09■□□□□ 0.65
CDC42SE1-203ENST00000470278 RARSP54136 660 aaKnown RBP19.09■□□□□ 0.65
CDC42SE1-203ENST00000470278 G2E3Q7L622 706 aa19.09■□□□□ 0.65
CDC42SE1-203ENST00000470278 MRPL50Q8N5N7 158 aaKnown RBP19.09■□□□□ 0.65
CDC42SE1-203ENST00000470278 BCS1LQ9Y276 419 aa19.09■□□□□ 0.65
CDC42SE1-203ENST00000470278 COL11A2P13942 1736 aaPredicted RBP19.08■□□□□ 0.65
CDC42SE1-203ENST00000470278 WDR90Q96KV7 1748 aa19.08■□□□□ 0.65
CDC42SE1-203ENST00000470278 KSR2Q6VAB6 950 aa19.08■□□□□ 0.64
CDC42SE1-203ENST00000470278 SETDB2Q96T68 719 aa19.08■□□□□ 0.64
CDC42SE1-203ENST00000470278 SMC4Q9NTJ3 1288 aa19.08■□□□□ 0.64
CDC42SE1-203ENST00000470278 PTPRCP08575 1304 aa19.07■□□□□ 0.64
CDC42SE1-203ENST00000470278 ZNF34Q8IZ26 560 aa19.07■□□□□ 0.64
CDC42SE1-203ENST00000470278 NIP7Q9Y221 180 aaKnown RBP eCLIP19.07■□□□□ 0.64
CDC42SE1-203ENST00000470278 PARP3Q9Y6F1 533 aa19.07■□□□□ 0.64
CDC42SE1-203ENST00000470278 TNRC6CQ9HCJ0 1690 aaKnown RBP19.07■□□□□ 0.64
CDC42SE1-203ENST00000470278 UBN2Q6ZU65 1347 aa19.06■□□□□ 0.64
CDC42SE1-203ENST00000470278 TIAM2Q8IVF5 1701 aa19.06■□□□□ 0.64
CDC42SE1-203ENST00000470278 FKBP5Q13451 457 aaPredicted RBP19.06■□□□□ 0.64
CDC42SE1-203ENST00000470278 TCIRG1Q13488 830 aa19.06■□□□□ 0.64
CDC42SE1-203ENST00000470278 PARP10Q53GL7 1025 aa19.06■□□□□ 0.64
CDC42SE1-203ENST00000470278 RIC3Q7Z5B4 369 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms