RNA–Protein interactions for RNA: ENST00000469976.2

LDHA-208, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-208	ENST00000469976	TRIM6-TRIM34	B2RNG4	842 aa		13.7	□□□□□ -0.22
LDHA-208	ENST00000469976	SLC39A6	Q13433	755 aa		13.7	□□□□□ -0.22
LDHA-208	ENST00000469976	TTC5	Q8N0Z6	440 aa		13.7	□□□□□ -0.22
LDHA-208	ENST00000469976	NFATC2IP	Q8NCF5	419 aa		13.7	□□□□□ -0.22
LDHA-208	ENST00000469976	PI4K2B	Q8TCG2	481 aa		13.7	□□□□□ -0.22
LDHA-208	ENST00000469976	RILPL2	Q969X0	211 aa		13.7	□□□□□ -0.22
LDHA-208	ENST00000469976	FMNL2	Q96PY5	1086 aa		13.7	□□□□□ -0.22
LDHA-208	ENST00000469976	IL1RAPL2	Q9NP60	686 aa		13.7	□□□□□ -0.22
LDHA-208	ENST00000469976	PCDH11X	Q9BZA7	1347 aa		13.69	□□□□□ -0.22
LDHA-208	ENST00000469976	PCDH11Y	Q9BZA8	1340 aa		13.69	□□□□□ -0.22
LDHA-208	ENST00000469976	NEXN	Q0ZGT2	675 aa		13.69	□□□□□ -0.22
LDHA-208	ENST00000469976	TSHZ3	Q63HK5	1081 aa		13.69	□□□□□ -0.22
LDHA-208	ENST00000469976	RIC3	Q7Z5B4	369 aa		13.69	□□□□□ -0.22
LDHA-208	ENST00000469976	NUTM1	Q86Y26	1132 aa		13.69	□□□□□ -0.22
LDHA-208	ENST00000469976	ZNF496	Q96IT1	587 aa	Predicted RBP	13.69	□□□□□ -0.22
LDHA-208	ENST00000469976	GBP4	Q96PP9	640 aa		13.69	□□□□□ -0.22
LDHA-208	ENST00000469976	METTL22	Q9BUU2	404 aa	Predicted RBP	13.69	□□□□□ -0.22
LDHA-208	ENST00000469976	KCP	Q6ZWJ8	1503 aa		13.69	□□□□□ -0.22
LDHA-208	ENST00000469976	PLCH1	Q4KWH8	1693 aa		13.69	□□□□□ -0.22
LDHA-208	ENST00000469976	ITGB4	P16144	1822 aa		13.69	□□□□□ -0.22
LDHA-208	ENST00000469976	GLRX3	O76003	335 aa	Known RBP	13.68	□□□□□ -0.22
LDHA-208	ENST00000469976	MCM2	P49736	904 aa		13.68	□□□□□ -0.22
LDHA-208	ENST00000469976	CABP4	P57796	275 aa		13.68	□□□□□ -0.22
LDHA-208	ENST00000469976	OS9	Q13438	667 aa	Predicted RBP	13.68	□□□□□ -0.22
LDHA-208	ENST00000469976	CWF19L2	Q2TBE0	894 aa	Known RBP	13.68	□□□□□ -0.22
LDHA-208	ENST00000469976	CLEC17A	Q6ZS10	378 aa		13.68	□□□□□ -0.22
LDHA-208	ENST00000469976	LRP10	Q7Z4F1	713 aa		13.68	□□□□□ -0.22
LDHA-208	ENST00000469976	CNTROB	Q8N137	903 aa		13.68	□□□□□ -0.22
LDHA-208	ENST00000469976	SUCLG2	Q96I99	432 aa		13.68	□□□□□ -0.22
LDHA-208	ENST00000469976	PRDM11	Q9NQV5	511 aa		13.68	□□□□□ -0.22
LDHA-208	ENST00000469976	COL14A1	Q05707	1796 aa	Known RBP	13.68	□□□□□ -0.22
LDHA-208	ENST00000469976	NEURL1B	A8MQ27	555 aa		13.67	□□□□□ -0.22
LDHA-208	ENST00000469976	ERVV-2	B6SEH9	535 aa		13.67	□□□□□ -0.22
LDHA-208	ENST00000469976	IGKV5-2	P06315	115 aa		13.67	□□□□□ -0.22
LDHA-208	ENST00000469976	UNC5CL	Q8IV45	518 aa		13.67	□□□□□ -0.22
LDHA-208	ENST00000469976	CLASRP	Q8N2M8	674 aa	Known RBP	13.67	□□□□□ -0.22
LDHA-208	ENST00000469976	XAGE3	Q8WTP9	111 aa		13.67	□□□□□ -0.22
LDHA-208	ENST00000469976	TNPO1	Q92973	898 aa	Known RBP	13.67	□□□□□ -0.22
LDHA-208	ENST00000469976	GPATCH3	Q96I76	525 aa		13.67	□□□□□ -0.22
LDHA-208	ENST00000469976	CWC22	Q9HCG8	908 aa	Known RBP	13.67	□□□□□ -0.22
LDHA-208	ENST00000469976	SLAIN2	Q9P270	581 aa		13.67	□□□□□ -0.22
LDHA-208	ENST00000469976	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.66	□□□□□ -0.22
LDHA-208	ENST00000469976	NUCB2	P80303	420 aa		13.66	□□□□□ -0.22
LDHA-208	ENST00000469976	AIMP1	Q12904	312 aa	Known RBP	13.66	□□□□□ -0.22
LDHA-208	ENST00000469976	NKX1-1	Q15270	411 aa	Predicted RBP	13.66	□□□□□ -0.22
LDHA-208	ENST00000469976	ZCRB1	Q8TBF4	217 aa	Known RBP	13.66	□□□□□ -0.22
LDHA-208	ENST00000469976	CARD10	Q9BWT7	1032 aa		13.66	□□□□□ -0.22
LDHA-208	ENST00000469976	TNS2	Q63HR2	1409 aa		13.65	□□□□□ -0.22
LDHA-208	ENST00000469976	GCKR	Q14397	625 aa		13.65	□□□□□ -0.22
LDHA-208	ENST00000469976	TOM1L2	Q6ZVM7	507 aa		13.65	□□□□□ -0.22
LDHA-208	ENST00000469976	COPS6	Q7L5N1	327 aa		13.65	□□□□□ -0.22
LDHA-208	ENST00000469976	KAZALD1	Q96I82	304 aa		13.65	□□□□□ -0.22
LDHA-208	ENST00000469976	BICC1	Q9H694	974 aa	Known RBP	13.65	□□□□□ -0.22
LDHA-208	ENST00000469976	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	KDM4F	A0A1W2PPD8	638 aa		13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	SGSM2	O43147	1006 aa		13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	TRAK2	O60296	914 aa		13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	MYL6B	P14649	208 aa		13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.64	□□□□□ -0.23	6e-39	■■■■□ 24.4
LDHA-208	ENST00000469976	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	L1TD1	Q5T7N2	865 aa	Known RBP	13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	ANKRD13D	Q6ZTN6	518 aa		13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	MYD88	Q99836	296 aa		13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	ANO2	Q9NQ90	1003 aa		13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	ECHDC1	Q9NTX5	307 aa		13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	USP16	Q9Y5T5	823 aa		13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	LRP6	O75581	1613 aa		13.64	□□□□□ -0.23
LDHA-208	ENST00000469976	IFIT2	P09913	472 aa	Known RBP	13.63	□□□□□ -0.23
LDHA-208	ENST00000469976	IL2RB	P14784	551 aa		13.63	□□□□□ -0.23
LDHA-208	ENST00000469976	PLBD2	Q8NHP8	589 aa		13.63	□□□□□ -0.23
LDHA-208	ENST00000469976	ANKRD36C	Q5JPF3	1778 aa		13.63	□□□□□ -0.23
LDHA-208	ENST00000469976	RAD50	Q92878	1312 aa		13.63	□□□□□ -0.23
LDHA-208	ENST00000469976	CYP2E1	P05181	493 aa	Predicted RBP	13.62	□□□□□ -0.23
LDHA-208	ENST00000469976	HSPA4	P34932	840 aa		13.62	□□□□□ -0.23
LDHA-208	ENST00000469976	RUFY2	Q8WXA3	655 aa		13.62	□□□□□ -0.23
LDHA-208	ENST00000469976	FOXD4L1	Q9NU39	408 aa		13.62	□□□□□ -0.23
LDHA-208	ENST00000469976	PA2G4	Q9UQ80	394 aa	Known RBP	13.62	□□□□□ -0.23
LDHA-208	ENST00000469976	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.61	□□□□□ -0.23
LDHA-208	ENST00000469976	GOLGA6L22	H0YM25	854 aa		13.61	□□□□□ -0.23
LDHA-208	ENST00000469976	HIP1	O00291	1037 aa		13.61	□□□□□ -0.23
LDHA-208	ENST00000469976	SASH1	O94885	1247 aa		13.61	□□□□□ -0.23
LDHA-208	ENST00000469976	SSFA2	P28290	1259 aa		13.61	□□□□□ -0.23
LDHA-208	ENST00000469976	NEK4	P51957	841 aa		13.61	□□□□□ -0.23
LDHA-208	ENST00000469976	CUL4A	Q13619	759 aa		13.61	□□□□□ -0.23
LDHA-208	ENST00000469976	RABL6	Q3YEC7	729 aa	Predicted RBP	13.61	□□□□□ -0.23
LDHA-208	ENST00000469976	EVI5L	Q96CN4	794 aa		13.61	□□□□□ -0.23
LDHA-208	ENST00000469976	LSG1	Q9H089	658 aa	Known RBP	13.61	□□□□□ -0.23
LDHA-208	ENST00000469976	COPRS	Q9NQ92	184 aa		13.61	□□□□□ -0.23
LDHA-208	ENST00000469976	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.61	□□□□□ -0.23
LDHA-208	ENST00000469976	AACS	Q86V21	672 aa		13.6	□□□□□ -0.23
LDHA-208	ENST00000469976	PALD1	Q9ULE6	856 aa		13.6	□□□□□ -0.23
LDHA-208	ENST00000469976	ISY1	Q9ULR0	285 aa	Known RBP	13.6	□□□□□ -0.23
LDHA-208	ENST00000469976	MAP4K4	O95819	1239 aa	Predicted RBP	13.59	□□□□□ -0.23
LDHA-208	ENST00000469976	RFX5	P48382	616 aa	Predicted RBP	13.59	□□□□□ -0.23
LDHA-208	ENST00000469976	KIAA1211	Q6ZU35	1233 aa		13.59	□□□□□ -0.23
LDHA-208	ENST00000469976	INTS4	Q96HW7	963 aa	Known RBP	13.59	□□□□□ -0.23
LDHA-208	ENST00000469976	DIAPH3	Q9NSV4	1193 aa		13.59	□□□□□ -0.23
LDHA-208	ENST00000469976	COL16A1	Q07092	1604 aa	Predicted RBP	13.59	□□□□□ -0.23
LDHA-208	ENST00000469976	SPEF2	Q9C093	1822 aa		13.59	□□□□□ -0.23
LDHA-208	ENST00000469976	ROBO1	Q9Y6N7	1651 aa		13.59	□□□□□ -0.23

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