RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 AFDNP55196 1824 aaKnown RBP27.8■■■□□ 2.04
RTN4R-205ENST00000469601 BCORQ6W2J9 1755 aa27.79■■■□□ 2.04
RTN4R-205ENST00000469601 NGEFQ8N5V2 710 aa27.79■■■□□ 2.04
RTN4R-205ENST00000469601 NIP7Q9Y221 180 aaKnown RBP eCLIP27.79■■■□□ 2.04
RTN4R-205ENST00000469601 LAS1LQ9Y4W2 734 aaKnown RBP27.79■■■□□ 2.04
RTN4R-205ENST00000469601 ANP32CO43423 234 aa27.78■■■□□ 2.04
RTN4R-205ENST00000469601 MYL6BP14649 208 aa27.78■■■□□ 2.04
RTN4R-205ENST00000469601 TPTE2Q6XPS3 522 aa27.78■■■□□ 2.04
RTN4R-205ENST00000469601 BRCA1P38398 1863 aaKnown RBP27.78■■■□□ 2.04
RTN4R-205ENST00000469601 MAP3K15Q6ZN16 1313 aa27.77■■■□□ 2.04
RTN4R-205ENST00000469601 CALD1Q05682 793 aaKnown RBP27.77■■■□□ 2.04
RTN4R-205ENST00000469601 GPBP1L1Q9HC44 474 aaPredicted RBP27.77■■■□□ 2.04
RTN4R-205ENST00000469601 APAF1O14727 1248 aa27.76■■■□□ 2.03
RTN4R-205ENST00000469601 EIF2S2P20042 333 aaKnown RBP27.76■■■□□ 2.03
RTN4R-205ENST00000469601 CFAP44Q96MT7 982 aa27.75■■■□□ 2.03
RTN4R-205ENST00000469601 HLFQ16534 295 aa27.74■■■□□ 2.03
RTN4R-205ENST00000469601 CCDC24Q8N4L8 307 aa27.74■■■□□ 2.03
RTN4R-205ENST00000469601 ZNF622Q969S3 477 aaKnown RBP eCLIP27.74■■■□□ 2.03
RTN4R-205ENST00000469601 ARFGEF1Q9Y6D6 1849 aa27.73■■■□□ 2.03
RTN4R-205ENST00000469601 HOXB7P09629 217 aa27.72■■■□□ 2.03
RTN4R-205ENST00000469601 GTF2E1P29083 439 aaPredicted RBP27.72■■■□□ 2.03
RTN4R-205ENST00000469601 TTLL7Q6ZT98 887 aa27.72■■■□□ 2.03
RTN4R-205ENST00000469601 CNKSR1Q969H4 720 aa27.72■■■□□ 2.03
RTN4R-205ENST00000469601 NYXQ9GZU5 481 aa27.72■■■□□ 2.03
RTN4R-205ENST00000469601 C9orf131Q5VYM1 1079 aa27.71■■■□□ 2.03
RTN4R-205ENST00000469601 STYK1Q6J9G0 422 aa27.71■■■□□ 2.03
RTN4R-205ENST00000469601 C1QTNF8P60827 252 aa27.7■■■□□ 2.02
RTN4R-205ENST00000469601 PDIA6Q15084 440 aa27.7■■■□□ 2.02
RTN4R-205ENST00000469601 ZNF526Q8TF50 670 aaPredicted RBP27.7■■■□□ 2.02
RTN4R-205ENST00000469601 MASTLQ96GX5 879 aa27.7■■■□□ 2.02
RTN4R-205ENST00000469601 ZBTB3Q9H5J0 574 aa27.7■■■□□ 2.02
RTN4R-205ENST00000469601 SRGNP10124 158 aa27.69■■■□□ 2.02
RTN4R-205ENST00000469601 IFT57Q9NWB7 429 aa27.69■■■□□ 2.02
RTN4R-205ENST00000469601 FAM177BA6PVY3 158 aa27.68■■■□□ 2.02
RTN4R-205ENST00000469601 GNAI1P63096 354 aa27.68■■■□□ 2.02
RTN4R-205ENST00000469601 CCDC184Q52MB2 194 aa27.68■■■□□ 2.02
RTN4R-205ENST00000469601 GIGYF2Q6Y7W6 1299 aaKnown RBP27.68■■■□□ 2.02
RTN4R-205ENST00000469601 MRS2Q9HD23 443 aa27.68■■■□□ 2.02
RTN4R-205ENST00000469601 DLEC1Q9Y238 1755 aa27.68■■■□□ 2.02
RTN4R-205ENST00000469601 LRP10Q7Z4F1 713 aa27.67■■■□□ 2.02
RTN4R-205ENST00000469601 DDX21Q9NR30 783 aaKnown RBP eCLIP27.67■■■□□ 2.02
RTN4R-205ENST00000469601 RNF181Q9P0P0 153 aa27.67■■■□□ 2.02
RTN4R-205ENST00000469601 KLRG2A4D1S0 409 aaPredicted RBP27.66■■■□□ 2.02
RTN4R-205ENST00000469601 ZNF853P0CG23 659 aa27.66■■■□□ 2.02
RTN4R-205ENST00000469601 NECTIN2Q92692 538 aa27.66■■■□□ 2.02
RTN4R-205ENST00000469601 IBTKQ9P2D0 1353 aaPredicted RBP27.65■■■□□ 2.02
RTN4R-205ENST00000469601 NPR1P16066 1061 aa27.65■■■□□ 2.02
RTN4R-205ENST00000469601 KRT24Q2M2I5 525 aa27.65■■■□□ 2.02
RTN4R-205ENST00000469601 SOGA3Q5TF21 947 aa27.65■■■□□ 2.02
RTN4R-205ENST00000469601 HDGFL1Q5TGJ6 251 aa27.65■■■□□ 2.02
RTN4R-205ENST00000469601 MBIPQ9NS73 344 aa27.65■■■□□ 2.02
RTN4R-205ENST00000469601 ANKRD31Q8N7Z5 1873 aa27.64■■■□□ 2.02
RTN4R-205ENST00000469601 LMNB1P20700 586 aa27.64■■■□□ 2.02
RTN4R-205ENST00000469601 PROSER3Q2NL68 480 aa27.64■■■□□ 2.02
RTN4R-205ENST00000469601 ZNF34Q8IZ26 560 aa27.64■■■□□ 2.02
RTN4R-205ENST00000469601 C21orf2O43822 256 aa27.63■■■□□ 2.01
RTN4R-205ENST00000469601 GPTP24298 496 aa27.63■■■□□ 2.01
RTN4R-205ENST00000469601 PARP10Q53GL7 1025 aa27.63■■■□□ 2.01
RTN4R-205ENST00000469601 PRPF40BQ6NWY9 871 aaKnown RBP27.63■■■□□ 2.01
RTN4R-205ENST00000469601 COPS6Q7L5N1 327 aa27.63■■■□□ 2.01
RTN4R-205ENST00000469601 DBF4Q9UBU7 674 aaPredicted RBP27.63■■■□□ 2.01
RTN4R-205ENST00000469601 ZC3H4Q9UPT8 1303 aaKnown RBP27.63■■■□□ 2.01
RTN4R-205ENST00000469601 ANXA1P04083 346 aa27.62■■■□□ 2.01
RTN4R-205ENST00000469601 HSP90AB3PQ58FF7 597 aa27.62■■■□□ 2.01
RTN4R-205ENST00000469601 DUSP27Q5VZP5 1158 aa27.62■■■□□ 2.01
RTN4R-205ENST00000469601 PPP1R42Q7Z4L9 355 aa27.62■■■□□ 2.01
RTN4R-205ENST00000469601 CHMP4AQ9BY43 222 aa27.62■■■□□ 2.01
RTN4R-205ENST00000469601 RASSF7Q02833 373 aa27.61■■■□□ 2.01
RTN4R-205ENST00000469601 XAGE3Q8WTP9 111 aa27.61■■■□□ 2.01
RTN4R-205ENST00000469601 CHPF2Q9P2E5 772 aa27.61■■■□□ 2.01
RTN4R-205ENST00000469601 AIMP1Q12904 312 aaKnown RBP27.6■■■□□ 2.01
RTN4R-205ENST00000469601 CCDC27Q2M243 656 aa27.6■■■□□ 2.01
RTN4R-205ENST00000469601 UBN2Q6ZU65 1347 aa27.6■■■□□ 2.01
RTN4R-205ENST00000469601 ALDH1B1P30837 517 aa27.59■■■□□ 2.01
RTN4R-205ENST00000469601 NCBP3Q53F19 620 aaKnown RBP27.59■■■□□ 2.01
RTN4R-205ENST00000469601 SUSD4Q5VX71 490 aa27.59■■■□□ 2.01
RTN4R-205ENST00000469601 ZNF219Q9P2Y4 722 aaPredicted RBP27.59■■■□□ 2.01
RTN4R-205ENST00000469601 KDM2BQ8NHM5 1336 aa27.59■■■□□ 2.01
RTN4R-205ENST00000469601 NFKBIEO00221 500 aa27.58■■■□□ 2.01
RTN4R-205ENST00000469601 ERFEQ4G0M1 354 aa27.58■■■□□ 2.01
RTN4R-205ENST00000469601 NUTM1Q86Y26 1132 aa27.58■■■□□ 2.01
RTN4R-205ENST00000469601 HYPKQ9NX55 129 aa27.58■■■□□ 2.01
RTN4R-205ENST00000469601 COL11A2P13942 1736 aaPredicted RBP27.58■■■□□ 2.01
RTN4R-205ENST00000469601 RIC1Q4ADV7 1423 aa27.57■■■□□ 2
RTN4R-205ENST00000469601 NTSR2O95665 410 aa27.56■■■□□ 2
RTN4R-205ENST00000469601 CRY2Q49AN0 593 aa27.56■■■□□ 2
RTN4R-205ENST00000469601 UTP14AQ9BVJ6 771 aaKnown RBP27.56■■■□□ 2
RTN4R-205ENST00000469601 RNF123Q5XPI4 1314 aa27.56■■■□□ 2
RTN4R-205ENST00000469601 LTBP3Q9NS15 1303 aa27.56■■■□□ 2
RTN4R-205ENST00000469601 TAOK3Q9H2K8 898 aa27.55■■■□□ 2
RTN4R-205ENST00000469601 ABCC12Q96J65 1359 aa27.55■■■□□ 2
RTN4R-205ENST00000469601 KIF3CO14782 793 aa27.54■■■□□ 2
RTN4R-205ENST00000469601 NUP98P52948 1817 aa27.54■■■□□ 2
RTN4R-205ENST00000469601 TCIRG1Q13488 830 aa27.54■■■□□ 2
RTN4R-205ENST00000469601 CCDC93Q567U6 631 aa27.54■■■□□ 2
RTN4R-205ENST00000469601 PLBD2Q8NHP8 589 aa27.54■■■□□ 2
RTN4R-205ENST00000469601 RPGRQ92834 1020 aaKnown RBP27.54■■■□□ 2
RTN4R-205ENST00000469601 ANKRD13DQ6ZTN6 518 aa27.53■■■□□ 2
RTN4R-205ENST00000469601 WWC1Q8IX03 1113 aa27.53■■■□□ 2
RTN4R-205ENST00000469601 C7orf43Q8WVR3 580 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms