RNA–Protein interactions for RNA: ENST00000468810.1

RPS27A-206, Transcript of ribosomal protein S27a, humanhuman

TSL 3

Gene RPS27A, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-206ENST00000468810 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
RPS27A-206ENST00000468810 GYS1P13807 737 aa12.63□□□□□ -0.39
RPS27A-206ENST00000468810 IL17REQ8NFR9 667 aa12.63□□□□□ -0.39
RPS27A-206ENST00000468810 RSPH6AQ9H0K4 717 aa12.63□□□□□ -0.39
RPS27A-206ENST00000468810 SRP68Q9UHB9 627 aaKnown RBP12.63□□□□□ -0.39
RPS27A-206ENST00000468810 DLG5Q8TDM6 1919 aa12.62□□□□□ -0.39
RPS27A-206ENST00000468810 BRCA1P38398 1863 aaKnown RBP12.61□□□□□ -0.39
RPS27A-206ENST00000468810 CYP19A1P11511 503 aaPredicted RBP12.61□□□□□ -0.39
RPS27A-206ENST00000468810 PRKAR2BP31323 418 aa12.61□□□□□ -0.39
RPS27A-206ENST00000468810 RFC4P35249 363 aa12.61□□□□□ -0.39
RPS27A-206ENST00000468810 AFDNP55196 1824 aaKnown RBP12.6□□□□□ -0.39
RPS27A-206ENST00000468810 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
RPS27A-206ENST00000468810 PDAP1Q13442 181 aaKnown RBP12.6□□□□□ -0.39
RPS27A-206ENST00000468810 PXDNLA1KZ92 1463 aa12.59□□□□□ -0.39
RPS27A-206ENST00000468810 GNAT3A8MTJ3 354 aa12.59□□□□□ -0.39
RPS27A-206ENST00000468810 U2AF1L5P0DN76 240 aaPredicted RBP12.59□□□□□ -0.39
RPS27A-206ENST00000468810 HOXB3P14651 431 aaPredicted RBP12.59□□□□□ -0.39
RPS27A-206ENST00000468810 U2AF1Q01081 240 aaKnown RBP eCLIP12.59□□□□□ -0.39
RPS27A-206ENST00000468810 NLGN1Q8N2Q7 840 aa12.59□□□□□ -0.39
RPS27A-206ENST00000468810 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
RPS27A-206ENST00000468810 CFAP53Q96M91 514 aa12.59□□□□□ -0.39
RPS27A-206ENST00000468810 CCDC87Q9NVE4 849 aa12.59□□□□□ -0.39
RPS27A-206ENST00000468810 SOS1Q07889 1333 aaPredicted RBP12.59□□□□□ -0.39
RPS27A-206ENST00000468810 USP42Q9H9J4 1324 aaKnown RBP12.59□□□□□ -0.39
RPS27A-206ENST00000468810 KCNQ3O43525 872 aa12.58□□□□□ -0.4
RPS27A-206ENST00000468810 DDR1Q08345 913 aa12.58□□□□□ -0.4
RPS27A-206ENST00000468810 C10orf71Q711Q0 1435 aa12.58□□□□□ -0.4
RPS27A-206ENST00000468810 ZBTB1Q9Y2K1 713 aa12.58□□□□□ -0.4
RPS27A-206ENST00000468810 CEMIPQ8WUJ3 1361 aa12.57□□□□□ -0.4
RPS27A-206ENST00000468810 A0A0G2JLW4 131 aa12.57□□□□□ -0.4
RPS27A-206ENST00000468810 GRIN3BO60391 1043 aa12.57□□□□□ -0.4
RPS27A-206ENST00000468810 USPL1Q5W0Q7 1092 aa12.57□□□□□ -0.4
RPS27A-206ENST00000468810 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
RPS27A-206ENST00000468810 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
RPS27A-206ENST00000468810 NUDCQ9Y266 331 aa12.56□□□□□ -0.4
RPS27A-206ENST00000468810 DPEP1P16444 411 aa12.55□□□□□ -0.4
RPS27A-206ENST00000468810 CANXP27824 592 aaKnown RBP12.55□□□□□ -0.4
RPS27A-206ENST00000468810 TM4SF1P30408 202 aa12.55□□□□□ -0.4
RPS27A-206ENST00000468810 TEFQ10587 303 aa12.55□□□□□ -0.4
RPS27A-206ENST00000468810 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
RPS27A-206ENST00000468810 ZNF790Q6PG37 636 aa12.55□□□□□ -0.4
RPS27A-206ENST00000468810 MCM10Q7L590 875 aa12.55□□□□□ -0.4
RPS27A-206ENST00000468810 VSIG10Q8N0Z9 540 aa12.55□□□□□ -0.4
RPS27A-206ENST00000468810 PARP3Q9Y6F1 533 aa12.55□□□□□ -0.4
RPS27A-206ENST00000468810 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
RPS27A-206ENST00000468810 COL15A1P39059 1388 aa12.55□□□□□ -0.4
RPS27A-206ENST00000468810 HEG1Q9ULI3 1381 aa12.55□□□□□ -0.4
RPS27A-206ENST00000468810 NRXN2Q9P2S2 1712 aa12.54□□□□□ -0.4
RPS27A-206ENST00000468810 POLRMTO00411 1230 aaKnown RBP12.54□□□□□ -0.4
RPS27A-206ENST00000468810 FCHSD2O94868 740 aa12.54□□□□□ -0.4
RPS27A-206ENST00000468810 KCNA3P22001 575 aa12.54□□□□□ -0.4
RPS27A-206ENST00000468810 TTC5Q8N0Z6 440 aa12.54□□□□□ -0.4
RPS27A-206ENST00000468810 PRAMEF22A3QJZ6 481 aa12.53□□□□□ -0.4
RPS27A-206ENST00000468810 EIF5P55010 431 aaKnown RBP12.53□□□□□ -0.4
RPS27A-206ENST00000468810 NARFQ9UHQ1 456 aa12.53□□□□□ -0.4
RPS27A-206ENST00000468810 BTBD11A6QL63 1104 aa12.52□□□□□ -0.41
RPS27A-206ENST00000468810 ZPR1O75312 459 aa12.52□□□□□ -0.41
RPS27A-206ENST00000468810 A1BGP04217 495 aa12.52□□□□□ -0.41
RPS27A-206ENST00000468810 TGFB2P61812 414 aa12.52□□□□□ -0.41
RPS27A-206ENST00000468810 NFIXQ14938 502 aa12.52□□□□□ -0.41
RPS27A-206ENST00000468810 BOLA1Q9Y3E2 137 aa12.52□□□□□ -0.41
RPS27A-206ENST00000468810 ANKRD31Q8N7Z5 1873 aa12.52□□□□□ -0.41
RPS27A-206ENST00000468810 ADCY9O60503 1353 aa12.52□□□□□ -0.41
RPS27A-206ENST00000468810 ATP10DQ9P241 1426 aa12.52□□□□□ -0.41
RPS27A-206ENST00000468810 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
RPS27A-206ENST00000468810 SBF1O95248 1867 aa12.51□□□□□ -0.41
RPS27A-206ENST00000468810 CHRNA5P30532 468 aa12.51□□□□□ -0.41
RPS27A-206ENST00000468810 PIP4K2AP48426 406 aaPredicted RBP12.51□□□□□ -0.41
RPS27A-206ENST00000468810 DDX10Q13206 875 aaKnown RBP12.51□□□□□ -0.41
RPS27A-206ENST00000468810 IFNLR1Q8IU57 520 aaPredicted RBP12.51□□□□□ -0.41
RPS27A-206ENST00000468810 FMNL2Q96PY5 1086 aa12.51□□□□□ -0.41
RPS27A-206ENST00000468810 PLEKHF1Q96S99 279 aa12.51□□□□□ -0.41
RPS27A-206ENST00000468810 BCS1LQ9Y276 419 aa12.51□□□□□ -0.41
RPS27A-206ENST00000468810 USP16Q9Y5T5 823 aa12.51□□□□□ -0.41
RPS27A-206ENST00000468810 KDM3BQ7LBC6 1761 aa12.51□□□□□ -0.41
RPS27A-206ENST00000468810 STARD3NLO95772 234 aa12.5□□□□□ -0.41
RPS27A-206ENST00000468810 MIS18AQ9NYP9 233 aa12.5□□□□□ -0.41
RPS27A-206ENST00000468810 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
RPS27A-206ENST00000468810 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
RPS27A-206ENST00000468810 DLEC1Q9Y238 1755 aa12.5□□□□□ -0.41
RPS27A-206ENST00000468810 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
RPS27A-206ENST00000468810 CARMIL3Q8ND23 1372 aa12.49□□□□□ -0.41
RPS27A-206ENST00000468810 RTF1Q92541 710 aaKnown RBP12.49□□□□□ -0.41
RPS27A-206ENST00000468810 THUMPD2Q9BTF0 503 aaKnown RBP12.49□□□□□ -0.41
RPS27A-206ENST00000468810 ZNF330Q9Y3S2 320 aaPredicted RBP12.49□□□□□ -0.41
RPS27A-206ENST00000468810 SERPINB2P05120 415 aa12.48□□□□□ -0.41
RPS27A-206ENST00000468810 TBC1D9BQ66K14 1250 aa12.48□□□□□ -0.41
RPS27A-206ENST00000468810 BICDL1Q6ZP65 573 aa12.48□□□□□ -0.41
RPS27A-206ENST00000468810 ZNF526Q8TF50 670 aaPredicted RBP12.48□□□□□ -0.41
RPS27A-206ENST00000468810 CACNA1SQ13698 1873 aa12.47□□□□□ -0.41
RPS27A-206ENST00000468810 HTATSF1O43719 755 aaKnown RBP12.47□□□□□ -0.41
RPS27A-206ENST00000468810 HOXB1P14653 301 aaPredicted RBP12.47□□□□□ -0.41
RPS27A-206ENST00000468810 IL6STP40189 918 aaPredicted RBP12.47□□□□□ -0.41
RPS27A-206ENST00000468810 C1QTNF8P60827 252 aa12.47□□□□□ -0.41
RPS27A-206ENST00000468810 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
RPS27A-206ENST00000468810 TEX13AQ9BXU3 409 aaPredicted RBP12.47□□□□□ -0.41
RPS27A-206ENST00000468810 LAMB4A4D0S4 1761 aa12.47□□□□□ -0.41
RPS27A-206ENST00000468810 COL11A2P13942 1736 aaPredicted RBP12.47□□□□□ -0.41
RPS27A-206ENST00000468810 NBPF26B4DH59 902 aa12.46□□□□□ -0.41
RPS27A-206ENST00000468810 GIGYF1O75420 1035 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms