RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 EPXP11678 715 aa10.22□□□□□ -0.77
ATG3-204ENST00000467275 ADH6P28332 368 aa10.22□□□□□ -0.77
ATG3-204ENST00000467275 HCN2Q9UL51 889 aa10.22□□□□□ -0.77
ATG3-204ENST00000467275 HCN4Q9Y3Q4 1203 aa10.22□□□□□ -0.77
ATG3-204ENST00000467275 PPP1R12BO60237 982 aaPredicted RBP10.21□□□□□ -0.77
ATG3-204ENST00000467275 SEC13P55735 322 aa10.21□□□□□ -0.77
ATG3-204ENST00000467275 LAMC2Q13753 1193 aa10.21□□□□□ -0.77
ATG3-204ENST00000467275 DCAF5Q96JK2 942 aa10.21□□□□□ -0.77
ATG3-204ENST00000467275 AVENQ9NQS1 362 aaPredicted RBP10.21□□□□□ -0.77
ATG3-204ENST00000467275 EFSO43281 561 aa10.2□□□□□ -0.78
ATG3-204ENST00000467275 DKK1O94907 266 aa10.2□□□□□ -0.78
ATG3-204ENST00000467275 C1orf53Q5VUE5 145 aa10.2□□□□□ -0.78
ATG3-204ENST00000467275 BTBD6Q96KE9 485 aa10.2□□□□□ -0.78
ATG3-204ENST00000467275 PHACTR1Q9C0D0 580 aa10.2□□□□□ -0.78
ATG3-204ENST00000467275 STRN4Q9NRL3 753 aa10.2□□□□□ -0.78
ATG3-204ENST00000467275 PCBP4P57723 403 aaKnown RBP10.19□□□□□ -0.78
ATG3-204ENST00000467275 C7orf43Q8WVR3 580 aa10.19□□□□□ -0.78
ATG3-204ENST00000467275 ATAD2Q6PL18 1390 aa10.18□□□□□ -0.78
ATG3-204ENST00000467275 IGHA1P01876 353 aa10.18□□□□□ -0.78
ATG3-204ENST00000467275 LMOD1P29536 600 aaPredicted RBP10.18□□□□□ -0.78
ATG3-204ENST00000467275 HIRAP54198 1017 aaPredicted RBP10.18□□□□□ -0.78
ATG3-204ENST00000467275 ZNF468Q5VIY5 522 aaPredicted RBP10.18□□□□□ -0.78
ATG3-204ENST00000467275 CHMP7Q8WUX9 453 aaPredicted RBP10.18□□□□□ -0.78
ATG3-204ENST00000467275 HINFPQ9BQA5 517 aa10.18□□□□□ -0.78
ATG3-204ENST00000467275 VRTNQ9H8Y1 702 aa10.18□□□□□ -0.78
ATG3-204ENST00000467275 ANKIB1Q9P2G1 1089 aa10.18□□□□□ -0.78
ATG3-204ENST00000467275 KLF15Q9UIH9 416 aa10.18□□□□□ -0.78
ATG3-204ENST00000467275 SCG3Q8WXD2 468 aaKnown RBP10.17□□□□□ -0.78
ATG3-204ENST00000467275 PIK3R2O00459 728 aa10.16□□□□□ -0.78
ATG3-204ENST00000467275 C21orf2O43822 256 aa10.16□□□□□ -0.78
ATG3-204ENST00000467275 DPYDQ12882 1025 aa10.16□□□□□ -0.78
ATG3-204ENST00000467275 CRTC2Q53ET0 693 aaPredicted RBP10.16□□□□□ -0.78
ATG3-204ENST00000467275 KANK4Q5T7N3 995 aaPredicted RBP10.16□□□□□ -0.78
ATG3-204ENST00000467275 POTEAQ6S8J7 498 aa10.16□□□□□ -0.78
ATG3-204ENST00000467275 FCHSD1Q86WN1 690 aa10.16□□□□□ -0.78
ATG3-204ENST00000467275 GAS2L2Q8NHY3 880 aa10.16□□□□□ -0.78
ATG3-204ENST00000467275 HSH2DQ96JZ2 352 aa10.16□□□□□ -0.78
ATG3-204ENST00000467275 ZNF777Q9ULD5 760 aaPredicted RBP10.16□□□□□ -0.78
ATG3-204ENST00000467275 PTK7Q13308 1070 aa10.15□□□□□ -0.78
ATG3-204ENST00000467275 PLA2G4EQ3MJ16 856 aa10.15□□□□□ -0.78
ATG3-204ENST00000467275 CHSY3Q70JA7 882 aa10.15□□□□□ -0.78
ATG3-204ENST00000467275 ALDH16A1Q8IZ83 802 aa10.15□□□□□ -0.78
ATG3-204ENST00000467275 CEP63Q96MT8 703 aa10.15□□□□□ -0.78
ATG3-204ENST00000467275 USP17L15C9J2P7 530 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 USP17L10C9JJH3 530 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 USP17L13C9JLJ4 530 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 USP17L12C9JPN9 530 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 USP17L11C9JVI0 530 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 USP17L21D6R901 530 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 USP17L18D6R9N7 530 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 USP17L22D6RA61 530 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 USP17L17D6RBQ6 530 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 USP17L19D6RCP7 530 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 USP17L20D6RJB6 530 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 HOXB4P17483 251 aaPredicted RBP10.14□□□□□ -0.79
ATG3-204ENST00000467275 USP17L24Q0WX57 530 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 SFSWAPQ12872 951 aaKnown RBP10.14□□□□□ -0.79
ATG3-204ENST00000467275 LINC00114Q6XXX2 140 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 SYT9Q86SS6 491 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 STAG2Q8N3U4 1231 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 NGLY1Q96IV0 654 aa10.14□□□□□ -0.79
ATG3-204ENST00000467275 C2orf49Q9BVC5 232 aaPredicted RBP10.14□□□□□ -0.79
ATG3-204ENST00000467275 FAM196BA6NMK8 535 aa10.13□□□□□ -0.79
ATG3-204ENST00000467275 GNB5O14775 395 aa10.13□□□□□ -0.79
ATG3-204ENST00000467275 GRIN2CQ14957 1233 aa10.13□□□□□ -0.79
ATG3-204ENST00000467275 ANKMY2Q8IV38 441 aa10.13□□□□□ -0.79
ATG3-204ENST00000467275 SUSD3Q96L08 255 aa10.13□□□□□ -0.79
ATG3-204ENST00000467275 BRD7Q9NPI1 651 aa10.13□□□□□ -0.79
ATG3-204ENST00000467275 LGR5O75473 907 aa10.12□□□□□ -0.79
ATG3-204ENST00000467275 DGKGP49619 791 aa10.12□□□□□ -0.79
ATG3-204ENST00000467275 ALYREFQ86V81 257 aaKnown RBP10.12□□□□□ -0.79
ATG3-204ENST00000467275 ZNF280CQ8ND82 737 aa10.12□□□□□ -0.79
ATG3-204ENST00000467275 MSTNO14793 375 aa10.11□□□□□ -0.79
ATG3-204ENST00000467275 ALAS2P22557 587 aa10.11□□□□□ -0.79
ATG3-204ENST00000467275 NEUROD1Q13562 356 aa10.11□□□□□ -0.79
ATG3-204ENST00000467275 HIF1AQ16665 826 aa10.11□□□□□ -0.79
ATG3-204ENST00000467275 SUV39H2Q9H5I1 410 aa10.11□□□□□ -0.79
ATG3-204ENST00000467275 ELOA3CA0A087WX78 387 aaPredicted RBP10.1□□□□□ -0.79
ATG3-204ENST00000467275 ELOA3DA6NLF2 546 aaPredicted RBP10.1□□□□□ -0.79
ATG3-204ENST00000467275 COL8A1P27658 744 aa10.1□□□□□ -0.79
ATG3-204ENST00000467275 SPEM2Q0P670 501 aa10.1□□□□□ -0.79
ATG3-204ENST00000467275 ELOA3BQ3SY89 546 aa10.1□□□□□ -0.79
ATG3-204ENST00000467275 ELOA3Q8NG57 546 aa10.1□□□□□ -0.79
ATG3-204ENST00000467275 SLC30A3Q99726 388 aa10.1□□□□□ -0.79
ATG3-204ENST00000467275 KCNH4Q9UQ05 1017 aa10.1□□□□□ -0.79
ATG3-204ENST00000467275 SIN3BO75182 1162 aa10.09□□□□□ -0.79
ATG3-204ENST00000467275 TYRO3Q06418 890 aa10.09□□□□□ -0.79
ATG3-204ENST00000467275 NOP53Q9NZM5 478 aaKnown RBP10.09□□□□□ -0.79
ATG3-204ENST00000467275 KRBA1A5PL33 1030 aa10.08□□□□□ -0.8
ATG3-204ENST00000467275 IGFBP4P22692 258 aa10.08□□□□□ -0.8
ATG3-204ENST00000467275 CFAP70Q5T0N1 1121 aa10.08□□□□□ -0.8
ATG3-204ENST00000467275 SPOCK3Q9BQ16 436 aa10.08□□□□□ -0.8
ATG3-204ENST00000467275 ITGB2P05107 769 aa10.07□□□□□ -0.8
ATG3-204ENST00000467275 RFX1P22670 979 aa10.07□□□□□ -0.8
ATG3-204ENST00000467275 KCNQ4P56696 695 aa10.07□□□□□ -0.8
ATG3-204ENST00000467275 SUZ12Q15022 739 aaKnown RBP10.07□□□□□ -0.8
ATG3-204ENST00000467275 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
ATG3-204ENST00000467275 BTLAQ7Z6A9 289 aa10.07□□□□□ -0.8
ATG3-204ENST00000467275 RAB44Q7Z6P3 723 aaPredicted RBP10.07□□□□□ -0.8
ATG3-204ENST00000467275 RTN1Q16799 776 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms