RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
NUP188-204ENST00000467044 MAP3K2Q9Y2U5 619 aa13.65□□□□□ -0.22
NUP188-204ENST00000467044 RREB1Q92766 1687 aa13.65□□□□□ -0.22
NUP188-204ENST00000467044 COL15A1P39059 1388 aa13.64□□□□□ -0.23
NUP188-204ENST00000467044 NEFLP07196 543 aa13.64□□□□□ -0.23
NUP188-204ENST00000467044 TRAPPC3LQ5T215 181 aa13.64□□□□□ -0.23
NUP188-204ENST00000467044 C20orf194Q5TEA3 1177 aa13.64□□□□□ -0.23
NUP188-204ENST00000467044 PANK1Q8TE04 598 aa13.64□□□□□ -0.23
NUP188-204ENST00000467044 TFCP2L1Q9NZI6 479 aa13.64□□□□□ -0.23
NUP188-204ENST00000467044 PDE3AQ14432 1141 aa13.63□□□□□ -0.23
NUP188-204ENST00000467044 ZNF827Q17R98 1081 aa13.63□□□□□ -0.23
NUP188-204ENST00000467044 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
NUP188-204ENST00000467044 DNAAF4Q8WXU2 420 aa13.63□□□□□ -0.23
NUP188-204ENST00000467044 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
NUP188-204ENST00000467044 STK32BQ9NY57 414 aa13.63□□□□□ -0.23
NUP188-204ENST00000467044 MAP3K15Q6ZN16 1313 aa13.63□□□□□ -0.23
NUP188-204ENST00000467044 ADCY9O60503 1353 aa13.62□□□□□ -0.23
NUP188-204ENST00000467044 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.62□□□□□ -0.23
NUP188-204ENST00000467044 RLBP1P12271 317 aa13.62□□□□□ -0.23
NUP188-204ENST00000467044 RFC4P35249 363 aa13.62□□□□□ -0.23
NUP188-204ENST00000467044 AMIGO3Q86WK7 504 aa13.62□□□□□ -0.23
NUP188-204ENST00000467044 TMEM57Q8N5G2 664 aa13.62□□□□□ -0.23
NUP188-204ENST00000467044 ARHGEF1Q92888 912 aaKnown RBP13.62□□□□□ -0.23
NUP188-204ENST00000467044 MYD88Q99836 296 aa13.62□□□□□ -0.23
NUP188-204ENST00000467044 UBR3Q6ZT12 1888 aa13.61□□□□□ -0.23
NUP188-204ENST00000467044 MSH5O43196 834 aa13.61□□□□□ -0.23
NUP188-204ENST00000467044 ZPR1O75312 459 aa13.61□□□□□ -0.23
NUP188-204ENST00000467044 SSFA2P28290 1259 aa13.61□□□□□ -0.23
NUP188-204ENST00000467044 NEXNQ0ZGT2 675 aa13.61□□□□□ -0.23
NUP188-204ENST00000467044 SLC15A2Q16348 729 aa13.61□□□□□ -0.23
NUP188-204ENST00000467044 COG6Q9Y2V7 657 aa13.61□□□□□ -0.23
NUP188-204ENST00000467044 ABCC4O15439 1325 aa13.61□□□□□ -0.23
NUP188-204ENST00000467044 ERVV-1B6SEH8 477 aa13.6□□□□□ -0.23
NUP188-204ENST00000467044 ADRA2BP18089 450 aa13.6□□□□□ -0.23
NUP188-204ENST00000467044 CCT4P50991 539 aaKnown RBP13.6□□□□□ -0.23
NUP188-204ENST00000467044 HLFQ16534 295 aa13.6□□□□□ -0.23
NUP188-204ENST00000467044 NUP188Q5SRE5 1749 aa13.6□□□□□ -0.23
NUP188-204ENST00000467044 ITPRIPQ8IWB1 547 aa13.6□□□□□ -0.23
NUP188-204ENST00000467044 CRBNQ96SW2 442 aa13.6□□□□□ -0.23
NUP188-204ENST00000467044 METTL22Q9BUU2 404 aaPredicted RBP13.6□□□□□ -0.23
NUP188-204ENST00000467044 ANO8Q9HCE9 1232 aaPredicted RBP13.6□□□□□ -0.23
NUP188-204ENST00000467044 SRP68Q9UHB9 627 aaKnown RBP13.6□□□□□ -0.23
NUP188-204ENST00000467044 NARFQ9UHQ1 456 aa13.6□□□□□ -0.23
NUP188-204ENST00000467044 ARFGEF2Q9Y6D5 1785 aa13.6□□□□□ -0.23
NUP188-204ENST00000467044 ATP5J2-PTCD1G3V325 749 aa13.59□□□□□ -0.23
NUP188-204ENST00000467044 CAMTA2O94983 1202 aa13.59□□□□□ -0.23
NUP188-204ENST00000467044 USPL1Q5W0Q7 1092 aa13.59□□□□□ -0.23
NUP188-204ENST00000467044 GIGYF2Q6Y7W6 1299 aaKnown RBP13.59□□□□□ -0.23
NUP188-204ENST00000467044 FLAD1Q8NFF5 587 aa13.59□□□□□ -0.23
NUP188-204ENST00000467044 SRCIN1Q9C0H9 1055 aa13.59□□□□□ -0.23
NUP188-204ENST00000467044 ZNF652Q9Y2D9 606 aa13.59□□□□□ -0.23
NUP188-204ENST00000467044 NUP98P52948 1817 aa13.58□□□□□ -0.24
NUP188-204ENST00000467044 TCIRG1Q13488 830 aa13.58□□□□□ -0.24
NUP188-204ENST00000467044 FKBP8Q14318 412 aa13.58□□□□□ -0.24
NUP188-204ENST00000467044 MVPQ14764 893 aaKnown RBP13.58□□□□□ -0.24
NUP188-204ENST00000467044 HSP90AB3PQ58FF7 597 aa13.58□□□□□ -0.24
NUP188-204ENST00000467044 BEND3Q5T5X7 828 aa13.58□□□□□ -0.24
NUP188-204ENST00000467044 INTS3Q68E01 1043 aaKnown RBP13.58□□□□□ -0.24
NUP188-204ENST00000467044 TUBGCP6Q96RT7 1819 aa13.57□□□□□ -0.24
NUP188-204ENST00000467044 GPTP24298 496 aa13.57□□□□□ -0.24
NUP188-204ENST00000467044 CWF19L2Q2TBE0 894 aaKnown RBP13.57□□□□□ -0.24
NUP188-204ENST00000467044 COL23A1Q86Y22 540 aaPredicted RBP13.57□□□□□ -0.24
NUP188-204ENST00000467044 LINS1Q8NG48 757 aa13.57□□□□□ -0.24
NUP188-204ENST00000467044 PNPLA7Q6ZV29 1317 aa13.57□□□□□ -0.24
NUP188-204ENST00000467044 USP42Q9H9J4 1324 aaKnown RBP13.57□□□□□ -0.24
NUP188-204ENST00000467044 C4AP0C0L4 1744 aa13.56□□□□□ -0.24
NUP188-204ENST00000467044 PXDNLA1KZ92 1463 aa13.56□□□□□ -0.24
NUP188-204ENST00000467044 AFDNP55196 1824 aaKnown RBP13.56□□□□□ -0.24
NUP188-204ENST00000467044 NEURL1BA8MQ27 555 aa13.56□□□□□ -0.24
NUP188-204ENST00000467044 ALDH1L1O75891 902 aa13.56□□□□□ -0.24
NUP188-204ENST00000467044 IGKV5-2P06315 115 aa13.56□□□□□ -0.24
NUP188-204ENST00000467044 CLEC4GQ6UXB4 293 aa13.56□□□□□ -0.24
NUP188-204ENST00000467044 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
NUP188-204ENST00000467044 EXOC6Q8TAG9 804 aa13.56□□□□□ -0.24
NUP188-204ENST00000467044 DDX19BQ9UMR2 479 aa13.56□□□□□ -0.24
NUP188-204ENST00000467044 ISCA1Q9BUE6 129 aa13.55□□□□□ -0.24
NUP188-204ENST00000467044 BCL2L12Q9HB09 334 aa13.55□□□□□ -0.24
NUP188-204ENST00000467044 C9orf78Q9NZ63 289 aaPredicted RBP13.55□□□□□ -0.24
NUP188-204ENST00000467044 NIP7Q9Y221 180 aaKnown RBP eCLIP13.55□□□□□ -0.24
NUP188-204ENST00000467044 BCORQ6W2J9 1755 aa13.55□□□□□ -0.24
NUP188-204ENST00000467044 ATP10DQ9P241 1426 aa13.55□□□□□ -0.24
NUP188-204ENST00000467044 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
NUP188-204ENST00000467044 GYS1P13807 737 aa13.54□□□□□ -0.24
NUP188-204ENST00000467044 TBC1D9BQ66K14 1250 aa13.54□□□□□ -0.24
NUP188-204ENST00000467044 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
NUP188-204ENST00000467044 CCDC191Q8NCU4 936 aa13.54□□□□□ -0.24
NUP188-204ENST00000467044 CHMP4BQ9H444 224 aaKnown RBP13.54□□□□□ -0.24
NUP188-204ENST00000467044 CWC25Q9NXE8 425 aaPredicted RBP13.54□□□□□ -0.24
NUP188-204ENST00000467044 SCN7AQ01118 1682 aa13.53□□□□□ -0.24
NUP188-204ENST00000467044 ANKRD36CQ5JPF3 1778 aa13.53□□□□□ -0.24
NUP188-204ENST00000467044 ZBTB7BO15156 539 aaPredicted RBP13.53□□□□□ -0.24
NUP188-204ENST00000467044 RGL2O15211 777 aa13.53□□□□□ -0.24
NUP188-204ENST00000467044 GCKRQ14397 625 aa13.53□□□□□ -0.24
NUP188-204ENST00000467044 RTL5Q5HYW3 569 aaPredicted RBP13.53□□□□□ -0.24
NUP188-204ENST00000467044 NLRP10Q86W26 655 aa13.53□□□□□ -0.24
NUP188-204ENST00000467044 JARID2Q92833 1246 aaPredicted RBP13.53□□□□□ -0.24
NUP188-204ENST00000467044 SETDB2Q96T68 719 aa13.53□□□□□ -0.24
NUP188-204ENST00000467044 N4BP2Q86UW6 1770 aaPredicted RBP13.53□□□□□ -0.24
NUP188-204ENST00000467044 TRIM28Q13263 835 aaKnown RBP13.52□□□□□ -0.25
NUP188-204ENST00000467044 PARP10Q53GL7 1025 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms