RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 NUP188Q5SRE5 1749 aa26.25■■□□□ 1.79
PPP1R3F-203ENST00000466508 GRM8O00222 908 aa26.25■■□□□ 1.79
PPP1R3F-203ENST00000466508 BMP2KLQ5H9B9 411 aa26.25■■□□□ 1.79
PPP1R3F-203ENST00000466508 GJD4Q96KN9 370 aaPredicted RBP26.25■■□□□ 1.79
PPP1R3F-203ENST00000466508 TEX13AQ9BXU3 409 aaPredicted RBP26.24■■□□□ 1.79
PPP1R3F-203ENST00000466508 A1BGP04217 495 aa26.23■■□□□ 1.79
PPP1R3F-203ENST00000466508 PPP1R42Q7Z4L9 355 aa26.23■■□□□ 1.79
PPP1R3F-203ENST00000466508 PLBD2Q8NHP8 589 aa26.23■■□□□ 1.79
PPP1R3F-203ENST00000466508 EXOC6BQ9Y2D4 811 aa26.23■■□□□ 1.79
PPP1R3F-203ENST00000466508 NEURL1BA8MQ27 555 aa26.23■■□□□ 1.79
PPP1R3F-203ENST00000466508 POLA2Q14181 598 aa26.23■■□□□ 1.79
PPP1R3F-203ENST00000466508 VPS72Q15906 364 aa26.23■■□□□ 1.79
PPP1R3F-203ENST00000466508 APBB1O00213 710 aa26.22■■□□□ 1.79
PPP1R3F-203ENST00000466508 PLEKHM2Q8IWE5 1019 aa26.22■■□□□ 1.79
PPP1R3F-203ENST00000466508 MYD88Q99836 296 aa26.22■■□□□ 1.79
PPP1R3F-203ENST00000466508 MTX1Q13505 466 aa26.21■■□□□ 1.79
PPP1R3F-203ENST00000466508 SYTL4Q96C24 671 aaPredicted RBP26.21■■□□□ 1.79
PPP1R3F-203ENST00000466508 SRGAP3O43295 1099 aa26.21■■□□□ 1.79
PPP1R3F-203ENST00000466508 SMARCA5O60264 1052 aaPredicted RBP26.21■■□□□ 1.79
PPP1R3F-203ENST00000466508 PRIM1P49642 420 aaKnown RBP26.21■■□□□ 1.79
PPP1R3F-203ENST00000466508 MARCH10Q8NA82 808 aaPredicted RBP26.21■■□□□ 1.79
PPP1R3F-203ENST00000466508 SEC24BO95487 1268 aa26.19■■□□□ 1.78
PPP1R3F-203ENST00000466508 GCKRQ14397 625 aa26.19■■□□□ 1.78
PPP1R3F-203ENST00000466508 LRRCC1Q9C099 1032 aa26.19■■□□□ 1.78
PPP1R3F-203ENST00000466508 DNAJC10Q8IXB1 793 aa26.19■■□□□ 1.78
PPP1R3F-203ENST00000466508 C16orf71Q8IYS4 520 aaPredicted RBP26.19■■□□□ 1.78
PPP1R3F-203ENST00000466508 RBM42Q9BTD8 480 aaKnown RBP26.19■■□□□ 1.78
PPP1R3F-203ENST00000466508 STARD3NLO95772 234 aa26.17■■□□□ 1.78
PPP1R3F-203ENST00000466508 IPO9Q96P70 1041 aaKnown RBP26.17■■□□□ 1.78
PPP1R3F-203ENST00000466508 TJP1Q07157 1748 aa26.17■■□□□ 1.78
PPP1R3F-203ENST00000466508 TTLL7Q6ZT98 887 aa26.17■■□□□ 1.78
PPP1R3F-203ENST00000466508 FAM98CQ17RN3 349 aaKnown RBP26.16■■□□□ 1.78
PPP1R3F-203ENST00000466508 OTUD7AQ8TE49 926 aaPredicted RBP26.16■■□□□ 1.78
PPP1R3F-203ENST00000466508 SUCLG2Q96I99 432 aa26.15■■□□□ 1.78
PPP1R3F-203ENST00000466508 RAB11FIP3O75154 756 aa26.15■■□□□ 1.78
PPP1R3F-203ENST00000466508 KAZALD1Q96I82 304 aa26.15■■□□□ 1.78
PPP1R3F-203ENST00000466508 SLC4A9Q96Q91 983 aa26.15■■□□□ 1.78
PPP1R3F-203ENST00000466508 BCL11AQ9H165 835 aa26.15■■□□□ 1.78
PPP1R3F-203ENST00000466508 SURF6O75683 361 aaKnown RBP26.14■■□□□ 1.78
PPP1R3F-203ENST00000466508 TTC22Q5TAA0 569 aa26.14■■□□□ 1.78
PPP1R3F-203ENST00000466508 MSH5O43196 834 aa26.13■■□□□ 1.77
PPP1R3F-203ENST00000466508 UPF2Q9HAU5 1272 aaKnown RBP26.13■■□□□ 1.77
PPP1R3F-203ENST00000466508 GSPT1P15170 499 aaKnown RBP26.13■■□□□ 1.77
PPP1R3F-203ENST00000466508 BICC1Q9H694 974 aaKnown RBP26.13■■□□□ 1.77
PPP1R3F-203ENST00000466508 HSP90AB4PQ58FF6 505 aa26.12■■□□□ 1.77
PPP1R3F-203ENST00000466508 OSBPL3Q9H4L5 887 aa26.12■■□□□ 1.77
PPP1R3F-203ENST00000466508 COL15A1P39059 1388 aa26.12■■□□□ 1.77
PPP1R3F-203ENST00000466508 ATP5J2-PTCD1G3V325 749 aa26.11■■□□□ 1.77
PPP1R3F-203ENST00000466508 NOP58Q9Y2X3 529 aaKnown RBP26.11■■□□□ 1.77
PPP1R3F-203ENST00000466508 THSD7AQ9UPZ6 1657 aa26.11■■□□□ 1.77
PPP1R3F-203ENST00000466508 SALL3Q9BXA9 1300 aa26.11■■□□□ 1.77
PPP1R3F-203ENST00000466508 CICQ96RK0 1608 aaPredicted RBP26.11■■□□□ 1.77
PPP1R3F-203ENST00000466508 CYP19A1P11511 503 aaPredicted RBP26.11■■□□□ 1.77
PPP1R3F-203ENST00000466508 ACSBG1Q96GR2 724 aa26.11■■□□□ 1.77
PPP1R3F-203ENST00000466508 ZBTB3Q9H5J0 574 aa26.1■■□□□ 1.77
PPP1R3F-203ENST00000466508 TUBGCP6Q96RT7 1819 aa26.09■■□□□ 1.77
PPP1R3F-203ENST00000466508 PDE1AP54750 535 aa26.08■■□□□ 1.77
PPP1R3F-203ENST00000466508 KIF1BPQ96EK5 621 aa26.08■■□□□ 1.77
PPP1R3F-203ENST00000466508 A0A087WZG4 1122 aa26.08■■□□□ 1.77
PPP1R3F-203ENST00000466508 UBE3BQ7Z3V4 1068 aa26.08■■□□□ 1.77
PPP1R3F-203ENST00000466508 RHPN1Q8TCX5 695 aa26.08■■□□□ 1.77
PPP1R3F-203ENST00000466508 A0A0G2JS52 829 aa26.07■■□□□ 1.76
PPP1R3F-203ENST00000466508 DDRGK1Q96HY6 314 aa26.07■■□□□ 1.76
PPP1R3F-203ENST00000466508 ONECUT3O60422 494 aaPredicted RBP26.06■■□□□ 1.76
PPP1R3F-203ENST00000466508 CWC25Q9NXE8 425 aaPredicted RBP26.06■■□□□ 1.76
PPP1R3F-203ENST00000466508 ZNF330Q9Y3S2 320 aaPredicted RBP26.06■■□□□ 1.76
PPP1R3F-203ENST00000466508 CASP7P55210 303 aa26.06■■□□□ 1.76
PPP1R3F-203ENST00000466508 KIF6Q6ZMV9 814 aa26.06■■□□□ 1.76
PPP1R3F-203ENST00000466508 SEPT12Q8IYM1 358 aa26.06■■□□□ 1.76
PPP1R3F-203ENST00000466508 CCDC191Q8NCU4 936 aa26.06■■□□□ 1.76
PPP1R3F-203ENST00000466508 TBC1D32Q96NH3 1257 aa26.06■■□□□ 1.76
PPP1R3F-203ENST00000466508 MX1P20591 662 aa26.05■■□□□ 1.76
PPP1R3F-203ENST00000466508 CDC45O75419 566 aa26.04■■□□□ 1.76
PPP1R3F-203ENST00000466508 MYT1Q01538 1121 aa26.04■■□□□ 1.76
PPP1R3F-203ENST00000466508 EPHA10Q5JZY3 1008 aa26.04■■□□□ 1.76
PPP1R3F-203ENST00000466508 TBC1D9Q6ZT07 1266 aa26.04■■□□□ 1.76
PPP1R3F-203ENST00000466508 IL1RAPL2Q9NP60 686 aa26.04■■□□□ 1.76
PPP1R3F-203ENST00000466508 MFAP1P55081 439 aaKnown RBP26.04■■□□□ 1.76
PPP1R3F-203ENST00000466508 UPF1Q92900 1129 aaKnown RBP eCLIP26.04■■□□□ 1.76
PPP1R3F-203ENST00000466508 ZBTB1Q9Y2K1 713 aa26.04■■□□□ 1.76
PPP1R3F-203ENST00000466508 RREB1Q92766 1687 aa26.03■■□□□ 1.76
PPP1R3F-203ENST00000466508 H7C1W4 665 aa26.03■■□□□ 1.76
PPP1R3F-203ENST00000466508 OS9Q13438 667 aaPredicted RBP26.03■■□□□ 1.76
PPP1R3F-203ENST00000466508 RABL6Q3YEC7 729 aaPredicted RBP26.03■■□□□ 1.76
PPP1R3F-203ENST00000466508 STAP2Q9UGK3 403 aa26.03■■□□□ 1.76
PPP1R3F-203ENST00000466508 ANKRD36CQ5JPF3 1778 aa26.03■■□□□ 1.76
PPP1R3F-203ENST00000466508 PALLDQ8WX93 1383 aa26.03■■□□□ 1.76
PPP1R3F-203ENST00000466508 ERC1Q8IUD2 1116 aa26.02■■□□□ 1.76
PPP1R3F-203ENST00000466508 ISCA1Q9BUE6 129 aa26.02■■□□□ 1.76
PPP1R3F-203ENST00000466508 PA2G4Q9UQ80 394 aaKnown RBP26.02■■□□□ 1.76
PPP1R3F-203ENST00000466508 ZNF831Q5JPB2 1677 aa26.02■■□□□ 1.76
PPP1R3F-203ENST00000466508 LOC102724428A0A0B4J2F2 783 aa26.02■■□□□ 1.76
PPP1R3F-203ENST00000466508 SDSP20132 328 aa26.02■■□□□ 1.76
PPP1R3F-203ENST00000466508 SIK1P57059 783 aa26.02■■□□□ 1.76
PPP1R3F-203ENST00000466508 TCIRG1Q13488 830 aa26.02■■□□□ 1.76
PPP1R3F-203ENST00000466508 JARID2Q92833 1246 aaPredicted RBP26.02■■□□□ 1.76
PPP1R3F-203ENST00000466508 AOX1Q06278 1338 aa26.02■■□□□ 1.76
PPP1R3F-203ENST00000466508 MAP3K15Q6ZN16 1313 aa26.02■■□□□ 1.76
PPP1R3F-203ENST00000466508 KCNQ2O43526 872 aa26.01■■□□□ 1.75
PPP1R3F-203ENST00000466508 IL6STP40189 918 aaPredicted RBP26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms