RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 N4BP2Q86UW6 1770 aaPredicted RBP24.51■■□□□ 1.51
COL9A3-203ENST00000462700 TTLL7Q6ZT98 887 aa24.5■■□□□ 1.51
COL9A3-203ENST00000462700 NECTIN2Q92692 538 aa24.5■■□□□ 1.51
COL9A3-203ENST00000462700 KCNA3P22001 575 aa24.49■■□□□ 1.51
COL9A3-203ENST00000462700 HLFQ16534 295 aa24.49■■□□□ 1.51
COL9A3-203ENST00000462700 PROSER3Q2NL68 480 aa24.49■■□□□ 1.51
COL9A3-203ENST00000462700 KIF6Q6ZMV9 814 aa24.49■■□□□ 1.51
COL9A3-203ENST00000462700 MAP3K15Q6ZN16 1313 aa24.49■■□□□ 1.51
COL9A3-203ENST00000462700 ERVV-1B6SEH8 477 aa24.48■■□□□ 1.51
COL9A3-203ENST00000462700 YY1P25490 414 aa24.48■■□□□ 1.51
COL9A3-203ENST00000462700 DUSP27Q5VZP5 1158 aa24.48■■□□□ 1.51
COL9A3-203ENST00000462700 ANXA1P04083 346 aa24.47■■□□□ 1.51
COL9A3-203ENST00000462700 HDGFL1Q5TGJ6 251 aa24.47■■□□□ 1.51
COL9A3-203ENST00000462700 PRR5LQ6MZQ0 368 aa24.47■■□□□ 1.51
COL9A3-203ENST00000462700 CHRNA5P30532 468 aa24.46■■□□□ 1.51
COL9A3-203ENST00000462700 CNBD1Q8NA66 436 aa24.46■■□□□ 1.51
COL9A3-203ENST00000462700 DDX21Q9NR30 783 aaKnown RBP eCLIP24.46■■□□□ 1.51
COL9A3-203ENST00000462700 NIP7Q9Y221 180 aaKnown RBP eCLIP24.46■■□□□ 1.51
COL9A3-203ENST00000462700 IL16Q14005 1332 aa24.45■■□□□ 1.5
COL9A3-203ENST00000462700 ZBTB3Q9H5J0 574 aa24.45■■□□□ 1.5
COL9A3-203ENST00000462700 SALL2Q9Y467 1007 aaPredicted RBP24.45■■□□□ 1.5
COL9A3-203ENST00000462700 PIM2Q9P1W9 311 aa24.44■■□□□ 1.5
COL9A3-203ENST00000462700 CHPF2Q9P2E5 772 aa24.44■■□□□ 1.5
COL9A3-203ENST00000462700 BCS1LQ9Y276 419 aa24.44■■□□□ 1.5
COL9A3-203ENST00000462700 ATP10DQ9P241 1426 aa24.44■■□□□ 1.5
COL9A3-203ENST00000462700 NPHP1O15259 732 aa24.43■■□□□ 1.5
COL9A3-203ENST00000462700 NBPF5PQ86XG9 351 aaPredicted RBP24.43■■□□□ 1.5
COL9A3-203ENST00000462700 CCDC24Q8N4L8 307 aa24.43■■□□□ 1.5
COL9A3-203ENST00000462700 TSR2Q969E8 191 aaKnown RBP24.43■■□□□ 1.5
COL9A3-203ENST00000462700 BRIP1Q9BX63 1249 aa24.43■■□□□ 1.5
COL9A3-203ENST00000462700 BRCA1P38398 1863 aaKnown RBP24.43■■□□□ 1.5
COL9A3-203ENST00000462700 ST5P78524 1137 aa24.42■■□□□ 1.5
COL9A3-203ENST00000462700 C8orf58Q8NAV2 365 aa24.42■■□□□ 1.5
COL9A3-203ENST00000462700 DBF4Q9UBU7 674 aaPredicted RBP24.42■■□□□ 1.5
COL9A3-203ENST00000462700 ELL2O00472 640 aaPredicted RBP24.41■■□□□ 1.5
COL9A3-203ENST00000462700 GIGYF2Q6Y7W6 1299 aaKnown RBP24.41■■□□□ 1.5
COL9A3-203ENST00000462700 COPS6Q7L5N1 327 aa24.41■■□□□ 1.5
COL9A3-203ENST00000462700 XAGE3Q8WTP9 111 aa24.41■■□□□ 1.5
COL9A3-203ENST00000462700 CCER2I3L3R5 266 aa24.4■■□□□ 1.5
COL9A3-203ENST00000462700 AIMP1Q12904 312 aaKnown RBP24.4■■□□□ 1.5
COL9A3-203ENST00000462700 C2CD5Q86YS7 1000 aa24.4■■□□□ 1.5
COL9A3-203ENST00000462700 WDR63Q8IWG1 891 aa24.4■■□□□ 1.5
COL9A3-203ENST00000462700 ANKRD31Q8N7Z5 1873 aa24.39■■□□□ 1.5
COL9A3-203ENST00000462700 PDE6BP35913 854 aa24.39■■□□□ 1.49
COL9A3-203ENST00000462700 DALRD3Q5D0E6 543 aaKnown RBP24.39■■□□□ 1.49
COL9A3-203ENST00000462700 TPTE2Q6XPS3 522 aa24.39■■□□□ 1.49
COL9A3-203ENST00000462700 FAM177BA6PVY3 158 aa24.38■■□□□ 1.49
COL9A3-203ENST00000462700 H0YIN7 160 aa24.38■■□□□ 1.49
COL9A3-203ENST00000462700 PDZRN3Q9UPQ7 1066 aa24.38■■□□□ 1.49
COL9A3-203ENST00000462700 NUP98P52948 1817 aa24.38■■□□□ 1.49
COL9A3-203ENST00000462700 UBN2Q6ZU65 1347 aa24.37■■□□□ 1.49
COL9A3-203ENST00000462700 CHD4Q14839 1912 aa24.37■■□□□ 1.49
COL9A3-203ENST00000462700 DLEC1Q9Y238 1755 aa24.37■■□□□ 1.49
COL9A3-203ENST00000462700 GPTP24298 496 aa24.37■■□□□ 1.49
COL9A3-203ENST00000462700 ZNF34Q8IZ26 560 aa24.37■■□□□ 1.49
COL9A3-203ENST00000462700 TSPYL6Q8N831 410 aa24.37■■□□□ 1.49
COL9A3-203ENST00000462700 HYPKQ9NX55 129 aa24.37■■□□□ 1.49
COL9A3-203ENST00000462700 FANCIQ9NVI1 1328 aa24.35■■□□□ 1.49
COL9A3-203ENST00000462700 IBTKQ9P2D0 1353 aaPredicted RBP24.35■■□□□ 1.49
COL9A3-203ENST00000462700 NYXQ9GZU5 481 aa24.35■■□□□ 1.49
COL9A3-203ENST00000462700 DIEXFQ68CQ4 756 aaKnown RBP24.34■■□□□ 1.49
COL9A3-203ENST00000462700 CHMP4AQ9BY43 222 aa24.34■■□□□ 1.49
COL9A3-203ENST00000462700 COL11A2P13942 1736 aaPredicted RBP24.34■■□□□ 1.49
COL9A3-203ENST00000462700 GTF2E1P29083 439 aaPredicted RBP24.33■■□□□ 1.49
COL9A3-203ENST00000462700 HSP90AB3PQ58FF7 597 aa24.33■■□□□ 1.49
COL9A3-203ENST00000462700 CCDC30Q5VVM6 783 aa24.33■■□□□ 1.49
COL9A3-203ENST00000462700 SUSD4Q5VX71 490 aa24.33■■□□□ 1.49
COL9A3-203ENST00000462700 TTLL6Q8N841 843 aa24.33■■□□□ 1.49
COL9A3-203ENST00000462700 ARFGEF1Q9Y6D6 1849 aa24.33■■□□□ 1.48
COL9A3-203ENST00000462700 TWISTNBQ3B726 338 aaPredicted RBP24.32■■□□□ 1.48
COL9A3-203ENST00000462700 PARP10Q53GL7 1025 aa24.32■■□□□ 1.48
COL9A3-203ENST00000462700 PLBD2Q8NHP8 589 aa24.32■■□□□ 1.48
COL9A3-203ENST00000462700 ZNF622Q969S3 477 aaKnown RBP eCLIP24.32■■□□□ 1.48
COL9A3-203ENST00000462700 SPINK5Q9NQ38 1064 aaPredicted RBP24.32■■□□□ 1.48
COL9A3-203ENST00000462700 ABCC12Q96J65 1359 aa24.31■■□□□ 1.48
COL9A3-203ENST00000462700 KLRG2A4D1S0 409 aaPredicted RBP24.31■■□□□ 1.48
COL9A3-203ENST00000462700 NTSR2O95665 410 aa24.31■■□□□ 1.48
COL9A3-203ENST00000462700 SRGNP10124 158 aa24.31■■□□□ 1.48
COL9A3-203ENST00000462700 ANKRD13DQ6ZTN6 518 aa24.31■■□□□ 1.48
COL9A3-203ENST00000462700 ARHGAP27Q6ZUM4 889 aa24.31■■□□□ 1.48
COL9A3-203ENST00000462700 NUTM1Q86Y26 1132 aa24.31■■□□□ 1.48
COL9A3-203ENST00000462700 ZNF521Q96K83 1311 aa24.31■■□□□ 1.48
COL9A3-203ENST00000462700 TCIRG1Q13488 830 aa24.3■■□□□ 1.48
COL9A3-203ENST00000462700 ERFEQ4G0M1 354 aa24.3■■□□□ 1.48
COL9A3-203ENST00000462700 PPP1R42Q7Z4L9 355 aa24.3■■□□□ 1.48
COL9A3-203ENST00000462700 PHAXQ9H814 394 aaKnown RBP24.3■■□□□ 1.48
COL9A3-203ENST00000462700 RIC1Q4ADV7 1423 aa24.29■■□□□ 1.48
COL9A3-203ENST00000462700 STYK1Q6J9G0 422 aa24.29■■□□□ 1.48
COL9A3-203ENST00000462700 MASTLQ96GX5 879 aa24.29■■□□□ 1.48
COL9A3-203ENST00000462700 ANKRD36CQ5JPF3 1778 aa24.29■■□□□ 1.48
COL9A3-203ENST00000462700 GOLGA2Q08379 1002 aa24.28■■□□□ 1.48
COL9A3-203ENST00000462700 ZNF784Q8NCA9 323 aaPredicted RBP24.28■■□□□ 1.48
COL9A3-203ENST00000462700 MYH16Q9H6N6 1097 aa24.28■■□□□ 1.48
COL9A3-203ENST00000462700 TNRC6CQ9HCJ0 1690 aaKnown RBP24.27■■□□□ 1.48
COL9A3-203ENST00000462700 NLRP10Q86W26 655 aa24.27■■□□□ 1.48
COL9A3-203ENST00000462700 CNKSR1Q969H4 720 aa24.27■■□□□ 1.48
COL9A3-203ENST00000462700 UTP14AQ9BVJ6 771 aaKnown RBP24.27■■□□□ 1.48
COL9A3-203ENST00000462700 NPR1P16066 1061 aa24.26■■□□□ 1.47
COL9A3-203ENST00000462700 EXOSC9Q06265 439 aaKnown RBP24.26■■□□□ 1.47
COL9A3-203ENST00000462700 STK31Q9BXU1 1019 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms