RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 CCDC96Q2M329 555 aa8.28□□□□□ -1.08
CUBNP3-201ENST00000457461 ANKRD23Q86SG2 305 aa8.28□□□□□ -1.08
CUBNP3-201ENST00000457461 USHBP1Q8N6Y0 703 aa8.28□□□□□ -1.08
CUBNP3-201ENST00000457461 ZNF428Q96B54 188 aa8.28□□□□□ -1.08
CUBNP3-201ENST00000457461 THUMPD2Q9BTF0 503 aaKnown RBP8.28□□□□□ -1.08
CUBNP3-201ENST00000457461 FEZ2Q9UHY8 353 aaPredicted RBP8.28□□□□□ -1.08
CUBNP3-201ENST00000457461 WNK3Q9BYP7 1800 aa8.28□□□□□ -1.08
CUBNP3-201ENST00000457461 NRAPQ86VF7 1730 aa8.28□□□□□ -1.08
CUBNP3-201ENST00000457461 MEGF6O75095 1541 aa8.28□□□□□ -1.08
CUBNP3-201ENST00000457461 LOC102724159A0A0B4J2E5 919 aa8.27□□□□□ -1.08
CUBNP3-201ENST00000457461 CHL1O00533 1208 aa8.27□□□□□ -1.08
CUBNP3-201ENST00000457461 GUCY2CP25092 1073 aa8.27□□□□□ -1.08
CUBNP3-201ENST00000457461 EXOSC9Q06265 439 aaKnown RBP8.27□□□□□ -1.08
CUBNP3-201ENST00000457461 PWP2Q15269 919 aaKnown RBP8.27□□□□□ -1.08
CUBNP3-201ENST00000457461 MYRIPQ8NFW9 859 aa8.27□□□□□ -1.08
CUBNP3-201ENST00000457461 MBIPQ9NS73 344 aa8.27□□□□□ -1.08
CUBNP3-201ENST00000457461 NOL7Q9UMY1 257 aaKnown RBP8.27□□□□□ -1.08
CUBNP3-201ENST00000457461 GNAT3A8MTJ3 354 aa8.27□□□□□ -1.09
CUBNP3-201ENST00000457461 BCAR3O75815 825 aa8.27□□□□□ -1.09
CUBNP3-201ENST00000457461 NOP2P46087 812 aaKnown RBP8.27□□□□□ -1.09
CUBNP3-201ENST00000457461 HDAC1Q13547 482 aaPredicted RBP8.27□□□□□ -1.09
CUBNP3-201ENST00000457461 DCTN1Q14203 1278 aa8.27□□□□□ -1.09
CUBNP3-201ENST00000457461 AMOTQ4VCS5 1084 aa8.27□□□□□ -1.09
CUBNP3-201ENST00000457461 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.27□□□□□ -1.09
CUBNP3-201ENST00000457461 CWC22Q9HCG8 908 aaKnown RBP8.27□□□□□ -1.09
CUBNP3-201ENST00000457461 BABAM1Q9NWV8 329 aa8.27□□□□□ -1.09
CUBNP3-201ENST00000457461 OGFRQ9NZT2 677 aa8.27□□□□□ -1.09
CUBNP3-201ENST00000457461 WDR17Q8IZU2 1322 aa8.27□□□□□ -1.09
CUBNP3-201ENST00000457461 NWD2Q9ULI1 1742 aa8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 ZBTB7CA1YPR0 619 aa8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 TRIM6-TRIM34B2RNG4 842 aa8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 ARID4AP29374 1257 aaPredicted RBP8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 CHRNA2Q15822 529 aa8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 ALDH1L2Q3SY69 923 aa8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 ICE2Q659A1 982 aa8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 MCM10Q7L590 875 aa8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 RNF217Q8TC41 542 aa8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 PAIP2Q9BPZ3 127 aaKnown RBP8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 TRIM34Q9BYJ4 488 aa8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 MRC1P22897 1456 aa8.26□□□□□ -1.09
CUBNP3-201ENST00000457461 KLHL33A6NCF5 533 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 PPP1R12AO14974 1030 aaPredicted RBP8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 PLIN1O60240 522 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 TOM1O60784 492 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 CAPN2P17655 700 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 GTF2A1P52655 376 aaPredicted RBP8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 PDE3AQ14432 1141 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 PLEKHO1Q53GL0 409 aaPredicted RBP8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 CT47A1Q5JQC4 288 aaPredicted RBP8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 AKAP4Q5JQC9 854 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 TMTC2Q8N394 836 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 IL17REQ8NFR9 667 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 TSPAN18Q96SJ8 248 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 PRDM11Q9NQV5 511 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 MRVI1Q9Y6F6 885 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 VAMP4O75379 141 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 C11orf91Q3C1V1 193 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 C20orf194Q5TEA3 1177 aa8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 ZNF771Q7L3S4 317 aaPredicted RBP8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 RTF1Q92541 710 aaKnown RBP8.25□□□□□ -1.09
CUBNP3-201ENST00000457461 N4BP2Q86UW6 1770 aaPredicted RBP8.24□□□□□ -1.09
CUBNP3-201ENST00000457461 LIG1P18858 919 aa8.24□□□□□ -1.09
CUBNP3-201ENST00000457461 EXOC6Q8TAG9 804 aa8.24□□□□□ -1.09
CUBNP3-201ENST00000457461 SSH1Q8WYL5 1049 aa8.24□□□□□ -1.09
CUBNP3-201ENST00000457461 PANK2Q9BZ23 570 aa8.24□□□□□ -1.09
CUBNP3-201ENST00000457461 R3HCC1Q9Y3T6 440 aaKnown RBP8.24□□□□□ -1.09
CUBNP3-201ENST00000457461 SOS1Q07889 1333 aaPredicted RBP8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 HSP90AB1P08238 724 aaKnown RBP8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 SYCP1Q15431 976 aa8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 SKOR2Q2VWA4 1001 aaPredicted RBP8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 ZNF530Q6P9A1 599 aaPredicted RBP8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 RINLQ6ZS11 566 aa8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 EXOC8Q8IYI6 725 aa8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 TSPYL6Q8N831 410 aa8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 SPOCK2Q92563 424 aa8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 CRBNQ96SW2 442 aa8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 NLRP2Q9NX02 1062 aa8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 DISP2A7MBM2 1401 aa8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 KDM6AO15550 1401 aaPredicted RBP8.23□□□□□ -1.09
CUBNP3-201ENST00000457461 CTAGE5O15320 804 aa8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 PRR29P0C7W0 189 aa8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 GSCP56915 257 aaPredicted RBP8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 JMYQ8N9B5 988 aa8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 C8orf58Q8NAV2 365 aa8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 TACO1Q9BSH4 297 aaKnown RBP8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 NUB1Q9Y5A7 615 aa8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 DDX11L8A8MPP1 907 aa8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 SLFN14P0C7P3 912 aa8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 TATP17735 454 aaPredicted RBP8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 TNNT3P45378 269 aaPredicted RBP8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 TAF7Q15545 349 aaPredicted RBP8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 TWISTNBQ3B726 338 aaPredicted RBP8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 RAPGEF4Q8WZA2 1011 aa8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 SGSM3Q96HU1 749 aa8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 ANTXR1Q9H6X2 564 aa8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 PAXBP1Q9Y5B6 917 aa8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 PAPPAQ13219 1627 aa8.22□□□□□ -1.09
CUBNP3-201ENST00000457461 GLI3P10071 1580 aa8.21□□□□□ -1.1
CUBNP3-201ENST00000457461 CCDC196A0A1B0GTZ2 297 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms