RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 MBIPQ9NS73 344 aa13.12□□□□□ -0.31
RFX3-210ENST00000457373 IFT57Q9NWB7 429 aa13.12□□□□□ -0.31
RFX3-210ENST00000457373 TBC1D2BQ9UPU7 963 aa13.12□□□□□ -0.31
RFX3-210ENST00000457373 USP42Q9H9J4 1324 aaKnown RBP13.12□□□□□ -0.31
RFX3-210ENST00000457373 ZNF853P0CG23 659 aa13.11□□□□□ -0.31
RFX3-210ENST00000457373 NGEFQ8N5V2 710 aa13.11□□□□□ -0.31
RFX3-210ENST00000457373 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
RFX3-210ENST00000457373 NARFQ9UHQ1 456 aa13.11□□□□□ -0.31
RFX3-210ENST00000457373 NBPF26B4DH59 902 aa13.1□□□□□ -0.31
RFX3-210ENST00000457373 MYL6BP14649 208 aa13.1□□□□□ -0.31
RFX3-210ENST00000457373 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
RFX3-210ENST00000457373 NBPF15Q8N660 670 aa13.1□□□□□ -0.31
RFX3-210ENST00000457373 FHDC1Q9C0D6 1143 aaPredicted RBP13.1□□□□□ -0.31
RFX3-210ENST00000457373 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
RFX3-210ENST00000457373 MMP10P09238 476 aa13.09□□□□□ -0.31
RFX3-210ENST00000457373 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
RFX3-210ENST00000457373 SYT17Q9BSW7 474 aa13.09□□□□□ -0.31
RFX3-210ENST00000457373 BICDL1Q6ZP65 573 aa13.08□□□□□ -0.32
RFX3-210ENST00000457373 TSR2Q969E8 191 aaKnown RBP13.08□□□□□ -0.32
RFX3-210ENST00000457373 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
RFX3-210ENST00000457373 PARP3Q9Y6F1 533 aa13.08□□□□□ -0.32
RFX3-210ENST00000457373 ANXA1P04083 346 aa13.07□□□□□ -0.32
RFX3-210ENST00000457373 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
RFX3-210ENST00000457373 WDR63Q8IWG1 891 aa13.07□□□□□ -0.32
RFX3-210ENST00000457373 RNF25Q96BH1 459 aaPredicted RBP13.07□□□□□ -0.32
RFX3-210ENST00000457373 CAMTA2O94983 1202 aa13.06□□□□□ -0.32
RFX3-210ENST00000457373 TM4SF1P30408 202 aa13.06□□□□□ -0.32
RFX3-210ENST00000457373 IL16Q14005 1332 aa13.06□□□□□ -0.32
RFX3-210ENST00000457373 DDR1Q08345 913 aa13.05□□□□□ -0.32
RFX3-210ENST00000457373 NFIXQ14938 502 aa13.05□□□□□ -0.32
RFX3-210ENST00000457373 PDIA6Q15084 440 aa13.05□□□□□ -0.32
RFX3-210ENST00000457373 HDGFL1Q5TGJ6 251 aa13.05□□□□□ -0.32
RFX3-210ENST00000457373 TBC1D9BQ66K14 1250 aa13.05□□□□□ -0.32
RFX3-210ENST00000457373 TTLL7Q6ZT98 887 aa13.05□□□□□ -0.32
RFX3-210ENST00000457373 C8orf58Q8NAV2 365 aa13.05□□□□□ -0.32
RFX3-210ENST00000457373 ERBB4Q15303 1308 aa13.05□□□□□ -0.32
RFX3-210ENST00000457373 BCORQ6W2J9 1755 aa13.04□□□□□ -0.32
RFX3-210ENST00000457373 POLRMTO00411 1230 aaKnown RBP13.04□□□□□ -0.32
RFX3-210ENST00000457373 HOXB7P09629 217 aa13.04□□□□□ -0.32
RFX3-210ENST00000457373 AIMP1Q12904 312 aaKnown RBP13.04□□□□□ -0.32
RFX3-210ENST00000457373 PROSER3Q2NL68 480 aa13.04□□□□□ -0.32
RFX3-210ENST00000457373 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
RFX3-210ENST00000457373 NLGN2Q8NFZ4 835 aa13.04□□□□□ -0.32
RFX3-210ENST00000457373 SCN7AQ01118 1682 aa13.04□□□□□ -0.32
RFX3-210ENST00000457373 AFDNP55196 1824 aaKnown RBP13.04□□□□□ -0.32
RFX3-210ENST00000457373 SERPINB2P05120 415 aa13.03□□□□□ -0.32
RFX3-210ENST00000457373 HLFQ16534 295 aa13.03□□□□□ -0.32
RFX3-210ENST00000457373 KIF6Q6ZMV9 814 aa13.03□□□□□ -0.32
RFX3-210ENST00000457373 ZBTB3Q9H5J0 574 aa13.03□□□□□ -0.32
RFX3-210ENST00000457373 DDX21Q9NR30 783 aaKnown RBP eCLIP13.03□□□□□ -0.32
RFX3-210ENST00000457373 CHPF2Q9P2E5 772 aa13.03□□□□□ -0.32
RFX3-210ENST00000457373 CD2APQ9Y5K6 639 aa13.03□□□□□ -0.32
RFX3-210ENST00000457373 NUP98P52948 1817 aa13.02□□□□□ -0.32
RFX3-210ENST00000457373 GOLGA2Q08379 1002 aa13.02□□□□□ -0.33
RFX3-210ENST00000457373 TWISTNBQ3B726 338 aaPredicted RBP13.02□□□□□ -0.33
RFX3-210ENST00000457373 COPS6Q7L5N1 327 aa13.02□□□□□ -0.33
RFX3-210ENST00000457373 DBF4Q9UBU7 674 aaPredicted RBP13.02□□□□□ -0.33
RFX3-210ENST00000457373 ZNF652Q9Y2D9 606 aa13.02□□□□□ -0.33
RFX3-210ENST00000457373 FANCIQ9NVI1 1328 aa13.02□□□□□ -0.33
RFX3-210ENST00000457373 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
RFX3-210ENST00000457373 EXOSC9Q06265 439 aaKnown RBP13.01□□□□□ -0.33
RFX3-210ENST00000457373 CLEC4GQ6UXB4 293 aa13.01□□□□□ -0.33
RFX3-210ENST00000457373 LRP10Q7Z4F1 713 aa13.01□□□□□ -0.33
RFX3-210ENST00000457373 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
RFX3-210ENST00000457373 XAGE3Q8WTP9 111 aa13.01□□□□□ -0.33
RFX3-210ENST00000457373 SETDB2Q96T68 719 aa13.01□□□□□ -0.33
RFX3-210ENST00000457373 MYH16Q9H6N6 1097 aa13.01□□□□□ -0.33
RFX3-210ENST00000457373 MAP3K15Q6ZN16 1313 aa13.01□□□□□ -0.33
RFX3-210ENST00000457373 N4BP2Q86UW6 1770 aaPredicted RBP13□□□□□ -0.33
RFX3-210ENST00000457373 ZNF521Q96K83 1311 aa13□□□□□ -0.33
RFX3-210ENST00000457373 FAM177BA6PVY3 158 aa13□□□□□ -0.33
RFX3-210ENST00000457373 ERVV-1B6SEH8 477 aa13□□□□□ -0.33
RFX3-210ENST00000457373 NPHP1O15259 732 aa13□□□□□ -0.33
RFX3-210ENST00000457373 CCDC30Q5VVM6 783 aa13□□□□□ -0.33
RFX3-210ENST00000457373 CCDC24Q8N4L8 307 aa13□□□□□ -0.33
RFX3-210ENST00000457373 WWC3Q9ULE0 1092 aa13□□□□□ -0.33
RFX3-210ENST00000457373 NIP7Q9Y221 180 aaKnown RBP eCLIP13□□□□□ -0.33
RFX3-210ENST00000457373 KIF13BQ9NQT8 1826 aa12.99□□□□□ -0.33
RFX3-210ENST00000457373 NBR1Q14596 966 aa12.99□□□□□ -0.33
RFX3-210ENST00000457373 PHAXQ9H814 394 aaKnown RBP12.99□□□□□ -0.33
RFX3-210ENST00000457373 HYPKQ9NX55 129 aa12.99□□□□□ -0.33
RFX3-210ENST00000457373 C10orf71Q711Q0 1435 aa12.98□□□□□ -0.33
RFX3-210ENST00000457373 CARMIL3Q8ND23 1372 aa12.98□□□□□ -0.33
RFX3-210ENST00000457373 A0A0G2JLW4 131 aa12.98□□□□□ -0.33
RFX3-210ENST00000457373 GPTP24298 496 aa12.98□□□□□ -0.33
RFX3-210ENST00000457373 TGFB2P61812 414 aa12.98□□□□□ -0.33
RFX3-210ENST00000457373 GSE1Q14687 1217 aa12.98□□□□□ -0.33
RFX3-210ENST00000457373 GPR162Q16538 588 aa12.98□□□□□ -0.33
RFX3-210ENST00000457373 GIGYF2Q6Y7W6 1299 aaKnown RBP12.98□□□□□ -0.33
RFX3-210ENST00000457373 CHMP4AQ9BY43 222 aa12.98□□□□□ -0.33
RFX3-210ENST00000457373 NRXN2Q9P2S2 1712 aa12.98□□□□□ -0.33
RFX3-210ENST00000457373 VAMP4O75379 141 aa12.97□□□□□ -0.33
RFX3-210ENST00000457373 DPEP1P16444 411 aa12.97□□□□□ -0.33
RFX3-210ENST00000457373 NUBP1P53384 320 aa12.97□□□□□ -0.33
RFX3-210ENST00000457373 PRR5LQ6MZQ0 368 aa12.97□□□□□ -0.33
RFX3-210ENST00000457373 NBPF5PQ86XG9 351 aaPredicted RBP12.97□□□□□ -0.33
RFX3-210ENST00000457373 CDCA7LQ96GN5 454 aa12.97□□□□□ -0.33
RFX3-210ENST00000457373 STK31Q9BXU1 1019 aa12.97□□□□□ -0.33
RFX3-210ENST00000457373 E9PSI1 815 aa12.96□□□□□ -0.33
RFX3-210ENST00000457373 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms