RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 ADARB2-AS1A8MUL3 147 aa5.74□□□□□ -1.49
LINC02540-201ENST00000455554 M0R082 166 aa5.74□□□□□ -1.49
LINC02540-201ENST00000455554 PIK3CDO00329 1044 aa5.74□□□□□ -1.49
LINC02540-201ENST00000455554 SFSWAPQ12872 951 aaKnown RBP5.74□□□□□ -1.49
LINC02540-201ENST00000455554 ARTNQ5T4W7 220 aa5.74□□□□□ -1.49
LINC02540-201ENST00000455554 ZNF417Q8TAU3 575 aa5.74□□□□□ -1.49
LINC02540-201ENST00000455554 C7orf43Q8WVR3 580 aa5.74□□□□□ -1.49
LINC02540-201ENST00000455554 NACC1Q96RE7 527 aa5.74□□□□□ -1.49
LINC02540-201ENST00000455554 ZNF587Q96SQ5 575 aaPredicted RBP5.74□□□□□ -1.49
LINC02540-201ENST00000455554 ZFP64Q9NPA5 681 aa5.74□□□□□ -1.49
LINC02540-201ENST00000455554 BACH1O14867 736 aa5.73□□□□□ -1.49
LINC02540-201ENST00000455554 NID1P14543 1247 aa5.73□□□□□ -1.49
LINC02540-201ENST00000455554 TRIM28Q13263 835 aaKnown RBP5.73□□□□□ -1.49
LINC02540-201ENST00000455554 TBCELQ5QJ74 424 aa5.73□□□□□ -1.49
LINC02540-201ENST00000455554 PRDM6Q9NQX0 595 aa5.73□□□□□ -1.49
LINC02540-201ENST00000455554 PCDHGA11Q9Y5H2 935 aa5.73□□□□□ -1.49
LINC02540-201ENST00000455554 BRPF1P55201 1214 aaPredicted RBP5.72□□□□□ -1.49
LINC02540-201ENST00000455554 LRRC69Q6ZNQ3 347 aa5.72□□□□□ -1.49
LINC02540-201ENST00000455554 MICALL1Q8N3F8 863 aa5.72□□□□□ -1.49
LINC02540-201ENST00000455554 TNFRSF25Q93038 417 aa5.72□□□□□ -1.49
LINC02540-201ENST00000455554 SOX11P35716 441 aa5.71□□□□□ -1.5
LINC02540-201ENST00000455554 SEMA3FQ13275 785 aa5.71□□□□□ -1.5
LINC02540-201ENST00000455554 TEAD4Q15561 434 aa5.71□□□□□ -1.5
LINC02540-201ENST00000455554 WASHC4Q2M389 1173 aa5.71□□□□□ -1.5
LINC02540-201ENST00000455554 L3MBTL2Q969R5 705 aa5.71□□□□□ -1.5
LINC02540-201ENST00000455554 NEUROD4Q9HD90 331 aa5.71□□□□□ -1.5
LINC02540-201ENST00000455554 SCHIP1Q9P0W5 487 aaPredicted RBP5.71□□□□□ -1.5
LINC02540-201ENST00000455554 GPC6Q9Y625 555 aaPredicted RBP5.71□□□□□ -1.5
LINC02540-201ENST00000455554 EML1O00423 815 aa5.7□□□□□ -1.5
LINC02540-201ENST00000455554 SELPP16109 830 aa5.7□□□□□ -1.5
LINC02540-201ENST00000455554 ADH7P40394 386 aa5.7□□□□□ -1.5
LINC02540-201ENST00000455554 ABL2P42684 1182 aa5.7□□□□□ -1.5
LINC02540-201ENST00000455554 NEUROD1Q13562 356 aa5.7□□□□□ -1.5
LINC02540-201ENST00000455554 SHISA2Q6UWI4 295 aa5.7□□□□□ -1.5
LINC02540-201ENST00000455554 C20orf204Q6ZNR8 217 aa5.7□□□□□ -1.5
LINC02540-201ENST00000455554 NBPF11Q86T75 865 aa5.7□□□□□ -1.5
LINC02540-201ENST00000455554 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.7□□□□□ -1.5
LINC02540-201ENST00000455554 GDPD2Q9HCC8 539 aa5.7□□□□□ -1.5
LINC02540-201ENST00000455554 NOS2P35228 1153 aa5.69□□□□□ -1.5
LINC02540-201ENST00000455554 SPEM2Q0P670 501 aa5.69□□□□□ -1.5
LINC02540-201ENST00000455554 EML3Q32P44 896 aa5.69□□□□□ -1.5
LINC02540-201ENST00000455554 ZNF358Q9NW07 568 aa5.69□□□□□ -1.5
LINC02540-201ENST00000455554 ZNF232Q9UNY5 417 aa5.69□□□□□ -1.5
LINC02540-201ENST00000455554 C9orf172C9J069 976 aa5.68□□□□□ -1.5
LINC02540-201ENST00000455554 H2AFB1P0C5Y9 115 aa5.68□□□□□ -1.5
LINC02540-201ENST00000455554 H2AFB2P0C5Z0 115 aa5.68□□□□□ -1.5
LINC02540-201ENST00000455554 EPHA4P54764 986 aa5.68□□□□□ -1.5
LINC02540-201ENST00000455554 GTF2IP78347 998 aa5.68□□□□□ -1.5
LINC02540-201ENST00000455554 PSME1Q06323 249 aa5.68□□□□□ -1.5
LINC02540-201ENST00000455554 MBTPS1Q14703 1052 aa5.68□□□□□ -1.5
LINC02540-201ENST00000455554 SLC9A9Q8IVB4 645 aa5.68□□□□□ -1.5
LINC02540-201ENST00000455554 NOD1Q9Y239 953 aa5.68□□□□□ -1.5
LINC02540-201ENST00000455554 HYAL3O43820 417 aaPredicted RBP5.67□□□□□ -1.5
LINC02540-201ENST00000455554 ADGRE1Q14246 886 aa5.67□□□□□ -1.5
LINC02540-201ENST00000455554 TRAPPC3LQ5T215 181 aa5.67□□□□□ -1.5
LINC02540-201ENST00000455554 TNS4Q8IZW8 715 aa5.67□□□□□ -1.5
LINC02540-201ENST00000455554 RHPN1Q8TCX5 695 aa5.67□□□□□ -1.5
LINC02540-201ENST00000455554 HSH2DQ96JZ2 352 aa5.67□□□□□ -1.5
LINC02540-201ENST00000455554 SERTM1A2A2V5 107 aa5.66□□□□□ -1.5
LINC02540-201ENST00000455554 LZTS3O60299 673 aaPredicted RBP5.66□□□□□ -1.5
LINC02540-201ENST00000455554 LILRB5O75023 590 aa5.66□□□□□ -1.5
LINC02540-201ENST00000455554 ELNP15502 786 aa5.66□□□□□ -1.5
LINC02540-201ENST00000455554 LRP8Q14114 963 aa5.66□□□□□ -1.5
LINC02540-201ENST00000455554 ZNF280CQ8ND82 737 aa5.66□□□□□ -1.5
LINC02540-201ENST00000455554 A0A0A0MRY4 1105 aa5.65□□□□□ -1.5
LINC02540-201ENST00000455554 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
LINC02540-201ENST00000455554 SKIP12755 728 aa5.65□□□□□ -1.5
LINC02540-201ENST00000455554 NRG1Q02297 640 aaPredicted RBP5.65□□□□□ -1.5
LINC02540-201ENST00000455554 TXNRD3Q86VQ6 643 aa5.65□□□□□ -1.5
LINC02540-201ENST00000455554 CEP63Q96MT8 703 aa5.65□□□□□ -1.5
LINC02540-201ENST00000455554 BRD7Q9NPI1 651 aa5.65□□□□□ -1.5
LINC02540-201ENST00000455554 KCNQ4P56696 695 aa5.64□□□□□ -1.51
LINC02540-201ENST00000455554 RAC1P63000 192 aa5.64□□□□□ -1.51
LINC02540-201ENST00000455554 C1orf53Q5VUE5 145 aa5.64□□□□□ -1.51
LINC02540-201ENST00000455554 NFATC2IPQ8NCF5 419 aa5.64□□□□□ -1.51
LINC02540-201ENST00000455554 LENG1Q96BZ8 264 aaPredicted RBP5.64□□□□□ -1.51
LINC02540-201ENST00000455554 SSBP4Q9BWG4 385 aaPredicted RBP5.64□□□□□ -1.51
LINC02540-201ENST00000455554 ANKIB1Q9P2G1 1089 aa5.64□□□□□ -1.51
LINC02540-201ENST00000455554 KIAA1024Q9UPX6 916 aa5.64□□□□□ -1.51
LINC02540-201ENST00000455554 KCNH4Q9UQ05 1017 aa5.64□□□□□ -1.51
LINC02540-201ENST00000455554 SFI1A8K8P3 1242 aa5.63□□□□□ -1.51
LINC02540-201ENST00000455554 PSMA6P60900 246 aaKnown RBP5.63□□□□□ -1.51
LINC02540-201ENST00000455554 TYRO3Q06418 890 aa5.63□□□□□ -1.51
LINC02540-201ENST00000455554 NCOA4Q13772 614 aa5.63□□□□□ -1.51
LINC02540-201ENST00000455554 ILDR2Q71H61 639 aa5.63□□□□□ -1.51
LINC02540-201ENST00000455554 NAGPAQ9UK23 515 aa5.63□□□□□ -1.51
LINC02540-201ENST00000455554 CHMP3Q9Y3E7 222 aa5.63□□□□□ -1.51
LINC02540-201ENST00000455554 HIRAP54198 1017 aaPredicted RBP5.62□□□□□ -1.51
LINC02540-201ENST00000455554 TBC1D8BQ0IIM8 1120 aa5.62□□□□□ -1.51
LINC02540-201ENST00000455554 DEPDC4Q8N2C3 294 aa5.62□□□□□ -1.51
LINC02540-201ENST00000455554 NUDT8Q8WV74 236 aa5.62□□□□□ -1.51
LINC02540-201ENST00000455554 BHMTQ93088 406 aa5.62□□□□□ -1.51
LINC02540-201ENST00000455554 TP53INP1Q96A56 240 aa5.62□□□□□ -1.51
LINC02540-201ENST00000455554 UBE2OQ9C0C9 1292 aaKnown RBP5.62□□□□□ -1.51
LINC02540-201ENST00000455554 JPH1Q9HDC5 661 aaPredicted RBP5.62□□□□□ -1.51
LINC02540-201ENST00000455554 SLC6A14Q9UN76 642 aa5.62□□□□□ -1.51
LINC02540-201ENST00000455554 HCN4Q9Y3Q4 1203 aa5.62□□□□□ -1.51
LINC02540-201ENST00000455554 USP17L5A8MUK1 530 aa5.61□□□□□ -1.51
LINC02540-201ENST00000455554 PLAURQ03405 335 aa5.61□□□□□ -1.51
LINC02540-201ENST00000455554 POTEAQ6S8J7 498 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms