RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ERVV-2B6SEH9 535 aa16.68■□□□□ 0.26
CLK3-203ENST00000454830 GPATCH3Q96I76 525 aa16.68■□□□□ 0.26
CLK3-203ENST00000454830 CCDC8Q9H0W5 538 aaPredicted RBP16.68■□□□□ 0.26
CLK3-203ENST00000454830 TTLL7Q6ZT98 887 aa16.68■□□□□ 0.26
CLK3-203ENST00000454830 OSBPL3Q9H4L5 887 aa16.68■□□□□ 0.26
CLK3-203ENST00000454830 XIRP1Q702N8 1843 aaKnown RBP16.67■□□□□ 0.26
CLK3-203ENST00000454830 MCCP23508 829 aa16.67■□□□□ 0.26
CLK3-203ENST00000454830 CD2BP2O95400 341 aaKnown RBP16.66■□□□□ 0.26
CLK3-203ENST00000454830 ERC1Q8IUD2 1116 aa16.66■□□□□ 0.26
CLK3-203ENST00000454830 CHMP5Q9NZZ3 219 aa16.66■□□□□ 0.26
CLK3-203ENST00000454830 CNTROBQ8N137 903 aa16.66■□□□□ 0.26
CLK3-203ENST00000454830 ASAP1Q9ULH1 1129 aa16.66■□□□□ 0.26
CLK3-203ENST00000454830 EXOC5O00471 708 aa16.65■□□□□ 0.26
CLK3-203ENST00000454830 RABEP1Q15276 862 aa16.65■□□□□ 0.26
CLK3-203ENST00000454830 COL18A1P39060 1754 aa16.65■□□□□ 0.26
CLK3-203ENST00000454830 K7ELQ4 463 aaPredicted RBP16.65■□□□□ 0.26
CLK3-203ENST00000454830 ESYT1Q9BSJ8 1104 aa16.65■□□□□ 0.26
CLK3-203ENST00000454830 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
CLK3-203ENST00000454830 CHMLP26374 656 aa16.65■□□□□ 0.26
CLK3-203ENST00000454830 NBPF14Q5TI25 921 aa16.65■□□□□ 0.26
CLK3-203ENST00000454830 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
CLK3-203ENST00000454830 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
CLK3-203ENST00000454830 KIF2CQ99661 725 aa16.65■□□□□ 0.26
CLK3-203ENST00000454830 EPHA10Q5JZY3 1008 aa16.64■□□□□ 0.26
CLK3-203ENST00000454830 CWC27Q6UX04 472 aaKnown RBP16.64■□□□□ 0.26
CLK3-203ENST00000454830 KIAA1211Q6ZU35 1233 aa16.64■□□□□ 0.26
CLK3-203ENST00000454830 DIAPH3Q9NSV4 1193 aa16.64■□□□□ 0.26
CLK3-203ENST00000454830 ST18O60284 1047 aa16.64■□□□□ 0.25
CLK3-203ENST00000454830 PLBD2Q8NHP8 589 aa16.64■□□□□ 0.25
CLK3-203ENST00000454830 DNAJC10Q8IXB1 793 aa16.63■□□□□ 0.25
CLK3-203ENST00000454830 CCDC85AQ96PX6 553 aaPredicted RBP16.63■□□□□ 0.25
CLK3-203ENST00000454830 STAP2Q9UGK3 403 aa16.63■□□□□ 0.25
CLK3-203ENST00000454830 GLRX3O76003 335 aaKnown RBP16.63■□□□□ 0.25
CLK3-203ENST00000454830 NEK4P51957 841 aa16.63■□□□□ 0.25
CLK3-203ENST00000454830 KAZALD1Q96I82 304 aa16.63■□□□□ 0.25
CLK3-203ENST00000454830 SNX21Q969T3 373 aa16.62■□□□□ 0.25
CLK3-203ENST00000454830 ECHDC1Q9NTX5 307 aa16.62■□□□□ 0.25
CLK3-203ENST00000454830 LMBR1LQ6UX01 489 aa16.62■□□□□ 0.25
CLK3-203ENST00000454830 PIGBQ92521 554 aa16.62■□□□□ 0.25
CLK3-203ENST00000454830 BOLA2Q9H3K6 86 aa16.62■□□□□ 0.25
CLK3-203ENST00000454830 SALL3Q9BXA9 1300 aa16.61■□□□□ 0.25
CLK3-203ENST00000454830 MTX1Q13505 466 aa16.61■□□□□ 0.25
CLK3-203ENST00000454830 ANTXR1Q9H6X2 564 aa16.61■□□□□ 0.25
CLK3-203ENST00000454830 KCNJ4P48050 445 aa16.61■□□□□ 0.25
CLK3-203ENST00000454830 CWC25Q9NXE8 425 aaPredicted RBP16.61■□□□□ 0.25
CLK3-203ENST00000454830 SCN11AQ9UI33 1791 aa16.61■□□□□ 0.25
CLK3-203ENST00000454830 ACSBG1Q96GR2 724 aa16.6■□□□□ 0.25
CLK3-203ENST00000454830 STARD3NLO95772 234 aa16.6■□□□□ 0.25
CLK3-203ENST00000454830 KIF6Q6ZMV9 814 aa16.6■□□□□ 0.25
CLK3-203ENST00000454830 PI4K2BQ8TCG2 481 aa16.6■□□□□ 0.25
CLK3-203ENST00000454830 EAF2Q96CJ1 260 aaPredicted RBP16.6■□□□□ 0.25
CLK3-203ENST00000454830 NEUROD6Q96NK8 337 aa16.6■□□□□ 0.25
CLK3-203ENST00000454830 UPF3BQ9BZI7 483 aaKnown RBP16.59■□□□□ 0.25
CLK3-203ENST00000454830 SASH1O94885 1247 aa16.59■□□□□ 0.25
CLK3-203ENST00000454830 GPTP24298 496 aa16.59■□□□□ 0.25
CLK3-203ENST00000454830 PRIM1P49642 420 aaKnown RBP16.58■□□□□ 0.25
CLK3-203ENST00000454830 NKX1-1Q15270 411 aaPredicted RBP16.58■□□□□ 0.25
CLK3-203ENST00000454830 GZF1Q9H116 711 aaPredicted RBP16.58■□□□□ 0.25
CLK3-203ENST00000454830 TLR7Q9NYK1 1049 aaKnown RBP16.58■□□□□ 0.25
CLK3-203ENST00000454830 TAF7LQ5H9L4 462 aa16.58■□□□□ 0.24
CLK3-203ENST00000454830 FSD1Q9BTV5 496 aa16.58■□□□□ 0.24
CLK3-203ENST00000454830 AOX1Q06278 1338 aa16.57■□□□□ 0.24
CLK3-203ENST00000454830 LRP10Q7Z4F1 713 aa16.57■□□□□ 0.24
CLK3-203ENST00000454830 TFCP2Q12800 502 aa16.57■□□□□ 0.24
CLK3-203ENST00000454830 DDB1Q16531 1140 aa16.57■□□□□ 0.24
CLK3-203ENST00000454830 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
CLK3-203ENST00000454830 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.57■□□□□ 0.24
CLK3-203ENST00000454830 TTC41PQ6P2S7 1318 aa16.57■□□□□ 0.24
CLK3-203ENST00000454830 FAM177BA6PVY3 158 aa16.56■□□□□ 0.24
CLK3-203ENST00000454830 GSE1Q14687 1217 aa16.56■□□□□ 0.24
CLK3-203ENST00000454830 PALD1Q9ULE6 856 aa16.56■□□□□ 0.24
CLK3-203ENST00000454830 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
CLK3-203ENST00000454830 ATG3Q9NT62 314 aa16.56■□□□□ 0.24
CLK3-203ENST00000454830 FOXD4L5Q5VV16 416 aaPredicted RBP16.56■□□□□ 0.24
CLK3-203ENST00000454830 FOXD4L4Q8WXT5 416 aaPredicted RBP16.56■□□□□ 0.24
CLK3-203ENST00000454830 ABCC6O95255 1503 aa16.56■□□□□ 0.24
CLK3-203ENST00000454830 IL25Q9H293 177 aa16.55■□□□□ 0.24
CLK3-203ENST00000454830 UTYO14607 1347 aa16.55■□□□□ 0.24
CLK3-203ENST00000454830 ERBB4Q15303 1308 aa16.55■□□□□ 0.24
CLK3-203ENST00000454830 C5P01031 1676 aa16.55■□□□□ 0.24
CLK3-203ENST00000454830 NDUFB9Q9Y6M9 179 aa16.55■□□□□ 0.24
CLK3-203ENST00000454830 ZNF594Q96JF6 807 aaPredicted RBP16.55■□□□□ 0.24
CLK3-203ENST00000454830 TEX13AQ9BXU3 409 aaPredicted RBP16.55■□□□□ 0.24
CLK3-203ENST00000454830 UBAP1LF5GYI3 381 aa16.54■□□□□ 0.24
CLK3-203ENST00000454830 TOM1O60784 492 aa16.54■□□□□ 0.24
CLK3-203ENST00000454830 SIPA1L3O60292 1781 aaPredicted RBP16.54■□□□□ 0.24
CLK3-203ENST00000454830 FAM89AQ96GI7 184 aa16.54■□□□□ 0.24
CLK3-203ENST00000454830 EDC3Q96F86 508 aaKnown RBP16.54■□□□□ 0.24
CLK3-203ENST00000454830 TBC1D2BQ9UPU7 963 aa16.54■□□□□ 0.24
CLK3-203ENST00000454830 MCM4P33991 863 aa16.53■□□□□ 0.24
CLK3-203ENST00000454830 PTPN12Q05209 780 aaKnown RBP16.53■□□□□ 0.24
CLK3-203ENST00000454830 EVI5LQ96CN4 794 aa16.53■□□□□ 0.24
CLK3-203ENST00000454830 CRYBG1Q9Y4K1 1723 aa16.52■□□□□ 0.24
CLK3-203ENST00000454830 GORABQ5T7V8 394 aa16.52■□□□□ 0.24
CLK3-203ENST00000454830 CCDC191Q8NCU4 936 aa16.52■□□□□ 0.24
CLK3-203ENST00000454830 SGSM2O43147 1006 aa16.52■□□□□ 0.24
CLK3-203ENST00000454830 CCDC57Q2TAC2 916 aa16.52■□□□□ 0.24
CLK3-203ENST00000454830 GBP4Q96PP9 640 aa16.52■□□□□ 0.24
CLK3-203ENST00000454830 PARP4Q9UKK3 1724 aaKnown RBP16.52■□□□□ 0.23
CLK3-203ENST00000454830 TNPO1Q92973 898 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms