RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 HMG20BQ9P0W2 317 aa13.96□□□□□ -0.17
SEC16A-207ENST00000453963 AKAP2Q9Y2D5 859 aa13.96□□□□□ -0.17
SEC16A-207ENST00000453963 MPRIPQ6WCQ1 1025 aa13.96□□□□□ -0.18
SEC16A-207ENST00000453963 PAF1Q8N7H5 531 aa13.96□□□□□ -0.18
SEC16A-207ENST00000453963 PHAXQ9H814 394 aaKnown RBP13.96□□□□□ -0.18
SEC16A-207ENST00000453963 AIDAQ96BJ3 306 aa13.96□□□□□ -0.18
SEC16A-207ENST00000453963 MBIPQ9NS73 344 aa13.95□□□□□ -0.18
SEC16A-207ENST00000453963 ZNF652Q9Y2D9 606 aa13.95□□□□□ -0.18
SEC16A-207ENST00000453963 ADAMTS2O95450 1211 aa13.95□□□□□ -0.18
SEC16A-207ENST00000453963 NEFHP12036 1026 aa13.95□□□□□ -0.18
SEC16A-207ENST00000453963 PRIM1P49642 420 aaKnown RBP13.95□□□□□ -0.18
SEC16A-207ENST00000453963 CNNM3Q8NE01 707 aa13.95□□□□□ -0.18
SEC16A-207ENST00000453963 LRP2BPQ9P2M1 347 aa13.95□□□□□ -0.18
SEC16A-207ENST00000453963 TTC21BQ7Z4L5 1316 aa13.95□□□□□ -0.18
SEC16A-207ENST00000453963 TUBB4AP04350 444 aa13.95□□□□□ -0.18
SEC16A-207ENST00000453963 KRT28Q7Z3Y7 464 aa13.95□□□□□ -0.18
SEC16A-207ENST00000453963 ANKRD44Q8N8A2 993 aa13.94□□□□□ -0.18
SEC16A-207ENST00000453963 TIGD1Q96MW7 591 aa13.94□□□□□ -0.18
SEC16A-207ENST00000453963 RAI14Q9P0K7 980 aa13.94□□□□□ -0.18
SEC16A-207ENST00000453963 ANKRD36BQ8N2N9 1353 aa13.94□□□□□ -0.18
SEC16A-207ENST00000453963 IDH1O75874 414 aaKnown RBP13.94□□□□□ -0.18
SEC16A-207ENST00000453963 GUCY1B3Q02153 619 aa13.94□□□□□ -0.18
SEC16A-207ENST00000453963 USP48Q86UV5 1035 aa13.94□□□□□ -0.18
SEC16A-207ENST00000453963 CADPS2Q86UW7 1296 aa13.94□□□□□ -0.18
SEC16A-207ENST00000453963 CCDC8Q9H0W5 538 aaPredicted RBP13.94□□□□□ -0.18
SEC16A-207ENST00000453963 ASXL1Q8IXJ9 1541 aa13.94□□□□□ -0.18
SEC16A-207ENST00000453963 METTL24Q5JXM2 366 aa13.94□□□□□ -0.18
SEC16A-207ENST00000453963 KLHL10Q6JEL2 608 aa13.94□□□□□ -0.18
SEC16A-207ENST00000453963 DBF4Q9UBU7 674 aaPredicted RBP13.94□□□□□ -0.18
SEC16A-207ENST00000453963 IFIT1P09914 478 aaKnown RBP13.94□□□□□ -0.18
SEC16A-207ENST00000453963 TAX1BP1Q86VP1 789 aa13.94□□□□□ -0.18
SEC16A-207ENST00000453963 DCAF8L1A6NGE4 600 aa13.93□□□□□ -0.18
SEC16A-207ENST00000453963 LARP6Q9BRS8 491 aaKnown RBP13.93□□□□□ -0.18
SEC16A-207ENST00000453963 SSBP05455 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
SEC16A-207ENST00000453963 FKBP15Q5T1M5 1219 aa13.93□□□□□ -0.18
SEC16A-207ENST00000453963 CCDC186Q7Z3E2 898 aa13.93□□□□□ -0.18
SEC16A-207ENST00000453963 SMARCC1Q92922 1105 aaPredicted RBP13.93□□□□□ -0.18
SEC16A-207ENST00000453963 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
SEC16A-207ENST00000453963 YEATS4O95619 227 aa13.93□□□□□ -0.18
SEC16A-207ENST00000453963 RBM25P49756 843 aaKnown RBP13.93□□□□□ -0.18
SEC16A-207ENST00000453963 PDE1AP54750 535 aa13.93□□□□□ -0.18
SEC16A-207ENST00000453963 SEPT7Q16181 437 aaKnown RBP13.93□□□□□ -0.18
SEC16A-207ENST00000453963 ZNF830Q96NB3 372 aaPredicted RBP13.93□□□□□ -0.18
SEC16A-207ENST00000453963 ESYT1Q9BSJ8 1104 aa13.93□□□□□ -0.18
SEC16A-207ENST00000453963 GTPBP4Q9BZE4 634 aaKnown RBP13.93□□□□□ -0.18
SEC16A-207ENST00000453963 TNRQ92752 1358 aa13.93□□□□□ -0.18
SEC16A-207ENST00000453963 PAFAH1B1P43034 410 aa13.93□□□□□ -0.18
SEC16A-207ENST00000453963 GIMAP7Q8NHV1 300 aa13.93□□□□□ -0.18
SEC16A-207ENST00000453963 ACEP12821 1306 aa13.92□□□□□ -0.18
SEC16A-207ENST00000453963 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
SEC16A-207ENST00000453963 PLCD4Q9BRC7 762 aa13.92□□□□□ -0.18
SEC16A-207ENST00000453963 ABCF2Q9UG63 623 aa13.92□□□□□ -0.18
SEC16A-207ENST00000453963 USO1O60763 962 aaKnown RBP13.92□□□□□ -0.18
SEC16A-207ENST00000453963 MICALCLQ6ZW33 695 aa13.92□□□□□ -0.18
SEC16A-207ENST00000453963 MYD88Q99836 296 aa13.92□□□□□ -0.18
SEC16A-207ENST00000453963 POLR3AO14802 1390 aaPredicted RBP13.92□□□□□ -0.18
SEC16A-207ENST00000453963 SKILP12757 684 aa13.92□□□□□ -0.18
SEC16A-207ENST00000453963 ENOX2Q16206 610 aaKnown RBP13.92□□□□□ -0.18
SEC16A-207ENST00000453963 NEK1Q96PY6 1258 aa13.92□□□□□ -0.18
SEC16A-207ENST00000453963 CCDC94Q9BW85 323 aaPredicted RBP13.92□□□□□ -0.18
SEC16A-207ENST00000453963 ATP10BO94823 1461 aa13.92□□□□□ -0.18
SEC16A-207ENST00000453963 PLCH2O75038 1416 aa13.92□□□□□ -0.18
SEC16A-207ENST00000453963 RBM5P52756 815 aaKnown RBP eCLIP13.92□□□□□ -0.18
SEC16A-207ENST00000453963 CNPY2Q9Y2B0 182 aa13.92□□□□□ -0.18
SEC16A-207ENST00000453963 NUP160Q12769 1436 aa13.91□□□□□ -0.18
SEC16A-207ENST00000453963 ANKRD18AQ8IVF6 992 aa13.91□□□□□ -0.18
SEC16A-207ENST00000453963 PTPRKQ15262 1439 aa13.91□□□□□ -0.18
SEC16A-207ENST00000453963 NGLY1Q96IV0 654 aa13.91□□□□□ -0.18
SEC16A-207ENST00000453963 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
SEC16A-207ENST00000453963 EXOC5O00471 708 aa13.91□□□□□ -0.18
SEC16A-207ENST00000453963 ZNF213O14771 459 aa13.91□□□□□ -0.18
SEC16A-207ENST00000453963 GNG11P61952 73 aa13.91□□□□□ -0.18
SEC16A-207ENST00000453963 MAPK8IP2Q13387 824 aaPredicted RBP13.91□□□□□ -0.18
SEC16A-207ENST00000453963 PPP1R42Q7Z4L9 355 aa13.91□□□□□ -0.18
SEC16A-207ENST00000453963 TTC12Q9H892 705 aaPredicted RBP13.91□□□□□ -0.18
SEC16A-207ENST00000453963 INCENPQ9NQS7 918 aa13.91□□□□□ -0.18
SEC16A-207ENST00000453963 HYPKQ9NX55 129 aa13.91□□□□□ -0.18
SEC16A-207ENST00000453963 GOLGA8BA8MQT2 603 aa13.9□□□□□ -0.18
SEC16A-207ENST00000453963 BIN1O00499 593 aa13.9□□□□□ -0.18
SEC16A-207ENST00000453963 F13A1P00488 732 aa13.9□□□□□ -0.18
SEC16A-207ENST00000453963 ANO6Q4KMQ2 910 aa13.9□□□□□ -0.18
SEC16A-207ENST00000453963 INTS4Q96HW7 963 aaKnown RBP13.9□□□□□ -0.18
SEC16A-207ENST00000453963 NUP88Q99567 741 aaPredicted RBP13.9□□□□□ -0.18
SEC16A-207ENST00000453963 ZPR1O75312 459 aa13.9□□□□□ -0.18
SEC16A-207ENST00000453963 CCT2P78371 535 aaKnown RBP13.9□□□□□ -0.18
SEC16A-207ENST00000453963 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.18
SEC16A-207ENST00000453963 ZSCAN29Q8IWY8 852 aaPredicted RBP13.9□□□□□ -0.18
SEC16A-207ENST00000453963 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
SEC16A-207ENST00000453963 SRRTQ9BXP5 876 aaKnown RBP13.9□□□□□ -0.18
SEC16A-207ENST00000453963 LMAN1P49257 510 aa13.9□□□□□ -0.18
SEC16A-207ENST00000453963 CCDC102BQ68D86 513 aa13.9□□□□□ -0.18
SEC16A-207ENST00000453963 KANK3Q6NY19 840 aa13.9□□□□□ -0.18
SEC16A-207ENST00000453963 RHPN1Q8TCX5 695 aa13.9□□□□□ -0.18
SEC16A-207ENST00000453963 SEC24BO95487 1268 aa13.89□□□□□ -0.19
SEC16A-207ENST00000453963 IFNL2Q8IZJ0 200 aa13.89□□□□□ -0.19
SEC16A-207ENST00000453963 NAPBQ9H115 298 aa13.89□□□□□ -0.19
SEC16A-207ENST00000453963 ZNF287Q9HBT7 754 aa13.89□□□□□ -0.19
SEC16A-207ENST00000453963 PIK3R4Q99570 1358 aa13.89□□□□□ -0.19
SEC16A-207ENST00000453963 CPLX3Q8WVH0 158 aa13.89□□□□□ -0.19
SEC16A-207ENST00000453963 SLU7O95391 586 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms