RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 CCDC83Q8IWF9 413 aa20.43■□□□□ 0.86
SCUBE2-202ENST00000450649 CHMP3Q9Y3E7 222 aa20.43■□□□□ 0.86
SCUBE2-202ENST00000450649 TMEM2Q9UHN6 1383 aa20.43■□□□□ 0.86
SCUBE2-202ENST00000450649 SGSM2O43147 1006 aa20.43■□□□□ 0.86
SCUBE2-202ENST00000450649 CPA1P15085 419 aa20.43■□□□□ 0.86
SCUBE2-202ENST00000450649 CAMK4Q16566 473 aa20.43■□□□□ 0.86
SCUBE2-202ENST00000450649 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.43■□□□□ 0.86
SCUBE2-202ENST00000450649 ZSCAN25Q6NSZ9 544 aa20.43■□□□□ 0.86
SCUBE2-202ENST00000450649 KIF18AQ8NI77 898 aa20.43■□□□□ 0.86
SCUBE2-202ENST00000450649 IL1RAPL2Q9NP60 686 aa20.43■□□□□ 0.86
SCUBE2-202ENST00000450649 AOX1Q06278 1338 aa20.42■□□□□ 0.86
SCUBE2-202ENST00000450649 FLIIQ13045 1269 aa20.42■□□□□ 0.86
SCUBE2-202ENST00000450649 NUP62CLQ9H1M0 184 aa20.42■□□□□ 0.86
SCUBE2-202ENST00000450649 ADAMTS13Q76LX8 1427 aa20.42■□□□□ 0.86
SCUBE2-202ENST00000450649 FLT4P35916 1363 aa20.42■□□□□ 0.86
SCUBE2-202ENST00000450649 HTATSF1O43719 755 aaKnown RBP20.42■□□□□ 0.86
SCUBE2-202ENST00000450649 SBNO1A3KN83 1393 aa20.42■□□□□ 0.86
SCUBE2-202ENST00000450649 TTC21AQ8NDW8 1320 aa20.41■□□□□ 0.86
SCUBE2-202ENST00000450649 VPS37CA5D8V6 355 aaPredicted RBP20.41■□□□□ 0.86
SCUBE2-202ENST00000450649 CCDC30Q5VVM6 783 aa20.41■□□□□ 0.86
SCUBE2-202ENST00000450649 NUTM1Q86Y26 1132 aa20.41■□□□□ 0.86
SCUBE2-202ENST00000450649 LSG1Q9H089 658 aaKnown RBP20.41■□□□□ 0.86
SCUBE2-202ENST00000450649 ESF1Q9H501 851 aaKnown RBP20.41■□□□□ 0.86
SCUBE2-202ENST00000450649 CYB5RLQ6IPT4 315 aa20.41■□□□□ 0.86
SCUBE2-202ENST00000450649 TRIM5Q9C035 493 aa20.41■□□□□ 0.86
SCUBE2-202ENST00000450649 CBX8Q9HC52 389 aa20.41■□□□□ 0.86
SCUBE2-202ENST00000450649 LIG1P18858 919 aa20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 IGSF1Q8N6C5 1336 aa20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 ZBTB22O15209 634 aa20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 SOX12O15370 315 aa20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 CASTP20810 708 aaKnown RBP20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 TPD52L1Q16890 204 aaPredicted RBP20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 TTC6Q86TZ1 520 aa20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 HYPKQ9NX55 129 aa20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 TNRQ92752 1358 aa20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 NUTM2FA1L443 756 aa20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 ZNF75DP51815 510 aa20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 TERF2Q15554 542 aa20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 ANO6Q4KMQ2 910 aa20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 CKAP2LQ8IYA6 745 aa20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 BCL11BQ9C0K0 894 aaPredicted RBP20.4■□□□□ 0.86
SCUBE2-202ENST00000450649 PLA2G4DQ86XP0 818 aa20.39■□□□□ 0.85
SCUBE2-202ENST00000450649 SOS1Q07889 1333 aaPredicted RBP20.39■□□□□ 0.85
SCUBE2-202ENST00000450649 EYA1Q99502 592 aa20.38■□□□□ 0.85
SCUBE2-202ENST00000450649 LRRFIP2Q9Y608 721 aaKnown RBP20.38■□□□□ 0.85
SCUBE2-202ENST00000450649 KRT222Q8N1A0 295 aa20.38■□□□□ 0.85
SCUBE2-202ENST00000450649 ZNF592Q92610 1267 aa20.38■□□□□ 0.85
SCUBE2-202ENST00000450649 TSPOAP1O95153 1857 aa20.38■□□□□ 0.85
SCUBE2-202ENST00000450649 FMN2Q9NZ56 1722 aa20.38■□□□□ 0.85
SCUBE2-202ENST00000450649 CACTINQ8WUQ7 758 aaKnown RBP20.37■□□□□ 0.85
SCUBE2-202ENST00000450649 CEP135Q66GS9 1140 aa20.37■□□□□ 0.85
SCUBE2-202ENST00000450649 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.37■□□□□ 0.85
SCUBE2-202ENST00000450649 TNMDQ9H2S6 317 aa20.37■□□□□ 0.85
SCUBE2-202ENST00000450649 SPG7Q9UQ90 795 aa20.37■□□□□ 0.85
SCUBE2-202ENST00000450649 RIMS1Q86UR5 1692 aaKnown RBP20.37■□□□□ 0.85
SCUBE2-202ENST00000450649 XRN1Q8IZH2 1706 aaKnown RBP20.37■□□□□ 0.85
SCUBE2-202ENST00000450649 KRT85P78386 507 aa20.37■□□□□ 0.85
SCUBE2-202ENST00000450649 PI4K2BQ8TCG2 481 aa20.36■□□□□ 0.85
SCUBE2-202ENST00000450649 CEP170BQ9Y4F5 1589 aaPredicted RBP20.36■□□□□ 0.85
SCUBE2-202ENST00000450649 KMT5BQ4FZB7 885 aa20.36■□□□□ 0.85
SCUBE2-202ENST00000450649 DACT1Q9NYF0 836 aa20.36■□□□□ 0.85
SCUBE2-202ENST00000450649 LRRC37A3O60309 1634 aa20.35■□□□□ 0.85
SCUBE2-202ENST00000450649 CWC27Q6UX04 472 aaKnown RBP20.35■□□□□ 0.85
SCUBE2-202ENST00000450649 ZNF397Q8NF99 534 aaPredicted RBP20.35■□□□□ 0.85
SCUBE2-202ENST00000450649 PDRG1Q9NUG6 133 aa20.35■□□□□ 0.85
SCUBE2-202ENST00000450649 CLIP2Q9UDT6 1046 aa20.35■□□□□ 0.85
SCUBE2-202ENST00000450649 FAM208AQ9UK61 1670 aaKnown RBP20.35■□□□□ 0.85
SCUBE2-202ENST00000450649 ST3GAL1Q11201 340 aa20.35■□□□□ 0.85
SCUBE2-202ENST00000450649 FAM173BQ6P4H8 233 aa20.35■□□□□ 0.85
SCUBE2-202ENST00000450649 PXDNLA1KZ92 1463 aa20.35■□□□□ 0.85
SCUBE2-202ENST00000450649 UBR1Q8IWV7 1749 aa20.35■□□□□ 0.85
SCUBE2-202ENST00000450649 CCDC66A2RUB6 948 aa20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 AMPHP49418 695 aa20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 CCDC144BQ3MJ40 725 aa20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 FERMT3Q86UX7 667 aa20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 CCDC144CPQ8IYA2 1237 aa20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 TDRD7Q8NHU6 1098 aaKnown RBP20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 ZSCAN31Q96LW9 406 aaPredicted RBP20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 PLEKHG1Q9ULL1 1385 aa20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 GNAT3A8MTJ3 354 aa20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 KCNJ4P48050 445 aa20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 USP44Q9H0E7 712 aa20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 SH2B1Q9NRF2 756 aaPredicted RBP20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 PTPRUQ92729 1446 aa20.34■□□□□ 0.85
SCUBE2-202ENST00000450649 ELP1O95163 1332 aa20.33■□□□□ 0.85
SCUBE2-202ENST00000450649 ADCK5Q3MIX3 580 aa20.33■□□□□ 0.85
SCUBE2-202ENST00000450649 VPS53Q5VIR6 699 aa20.33■□□□□ 0.85
SCUBE2-202ENST00000450649 JAKMIP1Q96N16 626 aaKnown RBP20.33■□□□□ 0.85
SCUBE2-202ENST00000450649 BABAM1Q9NWV8 329 aa20.33■□□□□ 0.85
SCUBE2-202ENST00000450649 LARP1BQ659C4 914 aaKnown RBP20.33■□□□□ 0.85
SCUBE2-202ENST00000450649 CNTROBQ8N137 903 aa20.33■□□□□ 0.85
SCUBE2-202ENST00000450649 NECAB1Q8N987 351 aa20.33■□□□□ 0.85
SCUBE2-202ENST00000450649 SSH3Q8TE77 659 aa20.33■□□□□ 0.85
SCUBE2-202ENST00000450649 ZNF215Q9UL58 517 aaPredicted RBP20.33■□□□□ 0.85
SCUBE2-202ENST00000450649 ME3Q16798 604 aa20.33■□□□□ 0.84
SCUBE2-202ENST00000450649 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.33■□□□□ 0.84
SCUBE2-202ENST00000450649 V9GYY5 206 aaPredicted RBP20.33■□□□□ 0.84
SCUBE2-202ENST00000450649 CDC37L1Q7L3B6 337 aa20.32■□□□□ 0.84
SCUBE2-202ENST00000450649 UBTFL1P0CB47 393 aaPredicted RBP20.32■□□□□ 0.84
SCUBE2-202ENST00000450649 ZNF165P49910 485 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms