RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 RPAP1Q9BWH6 1393 aaPredicted RBP16.66■□□□□ 0.26
CHFR-205ENST00000450056 POLR3GO15318 223 aaPredicted RBP16.65■□□□□ 0.26
CHFR-205ENST00000450056 HSPA4P34932 840 aa16.65■□□□□ 0.26
CHFR-205ENST00000450056 TMEM51Q9NW97 253 aa16.65■□□□□ 0.26
CHFR-205ENST00000450056 RGS12O14924 1447 aa16.65■□□□□ 0.26
CHFR-205ENST00000450056 FMNL2Q96PY5 1086 aa16.65■□□□□ 0.26
CHFR-205ENST00000450056 MTMR6Q9Y217 621 aa16.65■□□□□ 0.26
CHFR-205ENST00000450056 ALKQ9UM73 1620 aa16.65■□□□□ 0.26
CHFR-205ENST00000450056 GNAI3P08754 354 aa16.65■□□□□ 0.26
CHFR-205ENST00000450056 ADCK5Q3MIX3 580 aa16.65■□□□□ 0.26
CHFR-205ENST00000450056 DDX11Q96FC9 970 aa16.65■□□□□ 0.26
CHFR-205ENST00000450056 CYP46A1Q9Y6A2 500 aa16.65■□□□□ 0.26
CHFR-205ENST00000450056 MRVI1Q9Y6F6 885 aa16.65■□□□□ 0.26
CHFR-205ENST00000450056 FAM135BQ49AJ0 1406 aa16.65■□□□□ 0.26
CHFR-205ENST00000450056 USP27XA6NNY8 438 aa16.64■□□□□ 0.25
CHFR-205ENST00000450056 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
CHFR-205ENST00000450056 CDC37L1Q7L3B6 337 aa16.64■□□□□ 0.25
CHFR-205ENST00000450056 ERCC4Q92889 916 aaPredicted RBP16.64■□□□□ 0.25
CHFR-205ENST00000450056 ZFP91Q96JP5 570 aaPredicted RBP16.64■□□□□ 0.25
CHFR-205ENST00000450056 USP16Q9Y5T5 823 aa16.64■□□□□ 0.25
CHFR-205ENST00000450056 PTPRCP08575 1304 aa16.64■□□□□ 0.25
CHFR-205ENST00000450056 MLECQ14165 292 aa16.64■□□□□ 0.25
CHFR-205ENST00000450056 CNTROBQ8N137 903 aa16.64■□□□□ 0.25
CHFR-205ENST00000450056 TULP4Q9NRJ4 1543 aa16.64■□□□□ 0.25
CHFR-205ENST00000450056 SKILP12757 684 aa16.63■□□□□ 0.25
CHFR-205ENST00000450056 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
CHFR-205ENST00000450056 ZNF75DP51815 510 aa16.63■□□□□ 0.25
CHFR-205ENST00000450056 TAF3Q5VWG9 929 aa16.63■□□□□ 0.25
CHFR-205ENST00000450056 PTPRMP28827 1452 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 CTIFO43310 598 aaKnown RBP16.62■□□□□ 0.25
CHFR-205ENST00000450056 ZKSCAN1P17029 563 aaPredicted RBP16.62■□□□□ 0.25
CHFR-205ENST00000450056 TNNT3P45378 269 aaPredicted RBP16.62■□□□□ 0.25
CHFR-205ENST00000450056 FLIIQ13045 1269 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 CCDC144BQ3MJ40 725 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 CCDC144CPQ8IYA2 1237 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 KIF18AQ8NI77 898 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 TIGD1Q96MW7 591 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 DDX41Q9UJV9 622 aaKnown RBP16.62■□□□□ 0.25
CHFR-205ENST00000450056 HSP90B1P14625 803 aaKnown RBP16.62■□□□□ 0.25
CHFR-205ENST00000450056 HSP90AB2PQ58FF8 381 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 LTV1Q96GA3 475 aaPredicted RBP16.62■□□□□ 0.25
CHFR-205ENST00000450056 H3BQV1 296 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 RAB11FIP3O75154 756 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 IFFO2Q5TF58 517 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 PPP1R42Q7Z4L9 355 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 HOMER1Q86YM7 354 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 PAXBP1Q9Y5B6 917 aa16.62■□□□□ 0.25
CHFR-205ENST00000450056 NRXN3Q9Y4C0 1643 aa16.61■□□□□ 0.25
CHFR-205ENST00000450056 KMT5BQ4FZB7 885 aa16.61■□□□□ 0.25
CHFR-205ENST00000450056 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
CHFR-205ENST00000450056 SLFN14P0C7P3 912 aa16.61■□□□□ 0.25
CHFR-205ENST00000450056 ATP8B2P98198 1209 aa16.61■□□□□ 0.25
CHFR-205ENST00000450056 FAM177A1Q8N128 213 aaPredicted RBP16.61■□□□□ 0.25
CHFR-205ENST00000450056 FUCA2Q9BTY2 467 aa16.61■□□□□ 0.25
CHFR-205ENST00000450056 CHL1O00533 1208 aa16.6■□□□□ 0.25
CHFR-205ENST00000450056 PTH1RQ03431 593 aa16.6■□□□□ 0.25
CHFR-205ENST00000450056 GABPB1Q06547 395 aaPredicted RBP16.6■□□□□ 0.25
CHFR-205ENST00000450056 TERF2Q15554 542 aa16.6■□□□□ 0.25
CHFR-205ENST00000450056 ZRSR1Q15695 479 aaKnown RBP16.6■□□□□ 0.25
CHFR-205ENST00000450056 ME3Q16798 604 aa16.6■□□□□ 0.25
CHFR-205ENST00000450056 PUS7Q96PZ0 661 aaKnown RBP16.6■□□□□ 0.25
CHFR-205ENST00000450056 COL3A1P02461 1466 aaPredicted RBP16.6■□□□□ 0.25
CHFR-205ENST00000450056 SGSM2O43147 1006 aa16.6■□□□□ 0.25
CHFR-205ENST00000450056 NR1I2O75469 434 aa16.6■□□□□ 0.25
CHFR-205ENST00000450056 TXNDC2Q86VQ3 553 aa16.6■□□□□ 0.25
CHFR-205ENST00000450056 IRX5P78411 483 aaPredicted RBP16.6■□□□□ 0.25
CHFR-205ENST00000450056 EIF4A2Q14240 407 aaKnown RBP16.59■□□□□ 0.25
CHFR-205ENST00000450056 FBXO38Q6PIJ6 1188 aa16.59■□□□□ 0.25
CHFR-205ENST00000450056 CERS3Q8IU89 383 aa16.59■□□□□ 0.25
CHFR-205ENST00000450056 TMEM87AQ8NBN3 555 aa16.59■□□□□ 0.25
CHFR-205ENST00000450056 ZNF397Q8NF99 534 aaPredicted RBP16.59■□□□□ 0.25
CHFR-205ENST00000450056 RAD50Q92878 1312 aa16.59■□□□□ 0.25
CHFR-205ENST00000450056 RHPN1Q8TCX5 695 aa16.58■□□□□ 0.25
CHFR-205ENST00000450056 UBR1Q8IWV7 1749 aa16.58■□□□□ 0.25
CHFR-205ENST00000450056 ERCC6LQ2NKX8 1250 aa16.58■□□□□ 0.24
CHFR-205ENST00000450056 NOL10Q9BSC4 688 aaKnown RBP16.58■□□□□ 0.24
CHFR-205ENST00000450056 TRIM34Q9BYJ4 488 aa16.58■□□□□ 0.24
CHFR-205ENST00000450056 PNPLA6Q8IY17 1366 aa16.58■□□□□ 0.24
CHFR-205ENST00000450056 YTHDC2Q9H6S0 1430 aaKnown RBP16.58■□□□□ 0.24
CHFR-205ENST00000450056 CCDC69A6NI79 296 aa16.58■□□□□ 0.24
CHFR-205ENST00000450056 ANXA1P04083 346 aa16.58■□□□□ 0.24
CHFR-205ENST00000450056 HYPKQ9NX55 129 aa16.58■□□□□ 0.24
CHFR-205ENST00000450056 USP32Q8NFA0 1604 aa16.57■□□□□ 0.24
CHFR-205ENST00000450056 LARP1Q6PKG0 1096 aaKnown RBP16.57■□□□□ 0.24
CHFR-205ENST00000450056 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
CHFR-205ENST00000450056 SMC2O95347 1197 aa16.57■□□□□ 0.24
CHFR-205ENST00000450056 GNL2Q13823 731 aaKnown RBP16.57■□□□□ 0.24
CHFR-205ENST00000450056 RUFY2Q8WXA3 655 aa16.57■□□□□ 0.24
CHFR-205ENST00000450056 CCAR2Q8N163 923 aaKnown RBP16.56■□□□□ 0.24
CHFR-205ENST00000450056 IFIT2P09913 472 aaKnown RBP16.56■□□□□ 0.24
CHFR-205ENST00000450056 LSG1Q9H089 658 aaKnown RBP16.56■□□□□ 0.24
CHFR-205ENST00000450056 TTC14Q96N46 770 aa16.55■□□□□ 0.24
CHFR-205ENST00000450056 TPCN1Q9ULQ1 816 aa16.55■□□□□ 0.24
CHFR-205ENST00000450056 HTATSF1O43719 755 aaKnown RBP16.55■□□□□ 0.24
CHFR-205ENST00000450056 GUCY1B3Q02153 619 aa16.55■□□□□ 0.24
CHFR-205ENST00000450056 CCDC30Q5VVM6 783 aa16.55■□□□□ 0.24
CHFR-205ENST00000450056 SYT10Q6XYQ8 523 aa16.55■□□□□ 0.24
CHFR-205ENST00000450056 PHAXQ9H814 394 aaKnown RBP16.55■□□□□ 0.24
CHFR-205ENST00000450056 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
CHFR-205ENST00000450056 LRRC2Q9BYS8 371 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms