RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 CCDC92Q53HC0 331 aaPredicted RBP13.32□□□□□ -0.28
SHANK2-211ENST00000449833 USP6NLQ92738 828 aa13.32□□□□□ -0.28
SHANK2-211ENST00000449833 DRC1Q96MC2 740 aa13.32□□□□□ -0.28
SHANK2-211ENST00000449833 GAS2L2Q8NHY3 880 aa13.32□□□□□ -0.28
SHANK2-211ENST00000449833 IFI16Q16666 785 aaKnown RBP13.32□□□□□ -0.28
SHANK2-211ENST00000449833 STX1AQ16623 288 aa13.32□□□□□ -0.28
SHANK2-211ENST00000449833 KRBA2Q6ZNG9 492 aa13.32□□□□□ -0.28
SHANK2-211ENST00000449833 TRIM4Q9C037 500 aa13.32□□□□□ -0.28
SHANK2-211ENST00000449833 SAMD15Q9P1V8 674 aa13.32□□□□□ -0.28
SHANK2-211ENST00000449833 PFDN1O60925 122 aa13.32□□□□□ -0.28
SHANK2-211ENST00000449833 C1orf115Q9H7X2 142 aa13.32□□□□□ -0.28
SHANK2-211ENST00000449833 RAPGEF2Q9Y4G8 1499 aa13.32□□□□□ -0.28
SHANK2-211ENST00000449833 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
SHANK2-211ENST00000449833 TNIP1Q15025 636 aa13.31□□□□□ -0.28
SHANK2-211ENST00000449833 SETDB1Q15047 1291 aa13.31□□□□□ -0.28
SHANK2-211ENST00000449833 MCM6Q14566 821 aa13.31□□□□□ -0.28
SHANK2-211ENST00000449833 WHAMMQ8TF30 809 aa13.31□□□□□ -0.28
SHANK2-211ENST00000449833 ZFP91Q96JP5 570 aaPredicted RBP13.31□□□□□ -0.28
SHANK2-211ENST00000449833 UIMC1Q96RL1 719 aa13.31□□□□□ -0.28
SHANK2-211ENST00000449833 SEC63Q9UGP8 760 aaKnown RBP13.31□□□□□ -0.28
SHANK2-211ENST00000449833 IRX4P78413 519 aa13.31□□□□□ -0.28
SHANK2-211ENST00000449833 COMMD10Q9Y6G5 202 aa13.31□□□□□ -0.28
SHANK2-211ENST00000449833 PRR16Q569H4 304 aa13.31□□□□□ -0.28
SHANK2-211ENST00000449833 JADE2Q9NQC1 790 aa13.31□□□□□ -0.28
SHANK2-211ENST00000449833 HDXQ7Z353 690 aa13.31□□□□□ -0.28
SHANK2-211ENST00000449833 GMNNO75496 209 aa13.3□□□□□ -0.28
SHANK2-211ENST00000449833 MXRA7P84157 204 aa13.3□□□□□ -0.28
SHANK2-211ENST00000449833 FHOD3Q2V2M9 1422 aa13.3□□□□□ -0.28
SHANK2-211ENST00000449833 RAB34Q9BZG1 259 aa13.3□□□□□ -0.28
SHANK2-211ENST00000449833 TRMT1Q9NXH9 659 aaKnown RBP13.3□□□□□ -0.28
SHANK2-211ENST00000449833 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
SHANK2-211ENST00000449833 INPP5BP32019 993 aa13.3□□□□□ -0.28
SHANK2-211ENST00000449833 WDR78Q5VTH9 848 aa13.3□□□□□ -0.28
SHANK2-211ENST00000449833 GBP5Q96PP8 586 aa13.3□□□□□ -0.28
SHANK2-211ENST00000449833 SKILP12757 684 aa13.3□□□□□ -0.28
SHANK2-211ENST00000449833 ZKSCAN8Q15776 578 aaPredicted RBP13.3□□□□□ -0.28
SHANK2-211ENST00000449833 FAM76AQ8TAV0 307 aa13.3□□□□□ -0.28
SHANK2-211ENST00000449833 EFCC1Q9HA90 598 aa13.3□□□□□ -0.28
SHANK2-211ENST00000449833 CCDC88BA6NC98 1476 aa13.3□□□□□ -0.28
SHANK2-211ENST00000449833 LARSQ9P2J5 1176 aaKnown RBP13.3□□□□□ -0.28
SHANK2-211ENST00000449833 POLA1P09884 1462 aaPredicted RBP13.3□□□□□ -0.28
SHANK2-211ENST00000449833 CIB2O75838 187 aa13.3□□□□□ -0.28
SHANK2-211ENST00000449833 CETN1Q12798 172 aa13.29□□□□□ -0.28
SHANK2-211ENST00000449833 LRRC23Q53EV4 343 aaPredicted RBP13.29□□□□□ -0.28
SHANK2-211ENST00000449833 MGEA5O60502 916 aa13.29□□□□□ -0.28
SHANK2-211ENST00000449833 PPP4R3AQ6IN85 833 aa13.29□□□□□ -0.28
SHANK2-211ENST00000449833 LRRC45Q96CN5 670 aa13.29□□□□□ -0.28
SHANK2-211ENST00000449833 SERPINA10Q9UK55 444 aa13.29□□□□□ -0.28
SHANK2-211ENST00000449833 GOLGA1Q92805 767 aa13.29□□□□□ -0.28
SHANK2-211ENST00000449833 CCDC196A0A1B0GTZ2 297 aa13.29□□□□□ -0.28
SHANK2-211ENST00000449833 CWC27Q6UX04 472 aaKnown RBP13.29□□□□□ -0.28
SHANK2-211ENST00000449833 PLVAPQ9BX97 442 aa13.29□□□□□ -0.28
SHANK2-211ENST00000449833 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
SHANK2-211ENST00000449833 TDRD12Q587J7 1177 aaKnown RBP13.29□□□□□ -0.28
SHANK2-211ENST00000449833 ARHGAP24Q8N264 748 aa13.29□□□□□ -0.28
SHANK2-211ENST00000449833 SH2B1Q9NRF2 756 aaPredicted RBP13.29□□□□□ -0.28
SHANK2-211ENST00000449833 ALDH3A1P30838 453 aa13.28□□□□□ -0.28
SHANK2-211ENST00000449833 ADCY5O95622 1261 aa13.28□□□□□ -0.28
SHANK2-211ENST00000449833 TWISTNBQ3B726 338 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-211ENST00000449833 NUCKS1Q9H1E3 243 aaKnown RBP13.28□□□□□ -0.28
SHANK2-211ENST00000449833 DNA2P51530 1060 aa13.28□□□□□ -0.28
SHANK2-211ENST00000449833 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
SHANK2-211ENST00000449833 IQCGQ9H095 443 aaKnown RBP13.28□□□□□ -0.28
SHANK2-211ENST00000449833 PABPN1LA6NDY0 278 aaKnown RBP13.28□□□□□ -0.28
SHANK2-211ENST00000449833 VGLL3A8MV65 326 aa13.28□□□□□ -0.28
SHANK2-211ENST00000449833 CFAP58Q5T655 872 aa13.28□□□□□ -0.28
SHANK2-211ENST00000449833 CCDC129Q6ZRS4 1044 aa13.28□□□□□ -0.28
SHANK2-211ENST00000449833 ZNF287Q9HBT7 754 aa13.28□□□□□ -0.28
SHANK2-211ENST00000449833 RASAL2Q9UJF2 1139 aa13.28□□□□□ -0.28
SHANK2-211ENST00000449833 PLEKHH2Q8IVE3 1493 aa13.28□□□□□ -0.28
SHANK2-211ENST00000449833 EIF2AQ9BY44 585 aaKnown RBP13.28□□□□□ -0.28
SHANK2-211ENST00000449833 FKBP4Q02790 459 aaKnown RBP eCLIP13.28□□□□□ -0.28
SHANK2-211ENST00000449833 TAF7Q15545 349 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-211ENST00000449833 ATRIPQ8WXE1 791 aa13.28□□□□□ -0.28
SHANK2-211ENST00000449833 STAC3Q96MF2 364 aa13.28□□□□□ -0.28
SHANK2-211ENST00000449833 HSP90AA5PQ58FG0 334 aa13.27□□□□□ -0.28
SHANK2-211ENST00000449833 CPLX4Q7Z7G2 160 aa13.27□□□□□ -0.28
SHANK2-211ENST00000449833 VCX3AQ9NNX9 186 aa13.27□□□□□ -0.29
SHANK2-211ENST00000449833 ADAMTS8Q9UP79 889 aa13.27□□□□□ -0.29
SHANK2-211ENST00000449833 PDE1CQ14123 709 aaPredicted RBP13.27□□□□□ -0.29
SHANK2-211ENST00000449833 CTAGE9A4FU28 777 aa13.27□□□□□ -0.29
SHANK2-211ENST00000449833 ERCC3P19447 782 aa13.27□□□□□ -0.29
SHANK2-211ENST00000449833 TMC6Q7Z403 805 aa13.27□□□□□ -0.29
SHANK2-211ENST00000449833 PRPF4BQ13523 1007 aaKnown RBP13.27□□□□□ -0.29
SHANK2-211ENST00000449833 AACSQ86V21 672 aa13.27□□□□□ -0.29
SHANK2-211ENST00000449833 TACO1Q9BSH4 297 aaKnown RBP13.27□□□□□ -0.29
SHANK2-211ENST00000449833 FERMT2Q96AC1 680 aa13.26□□□□□ -0.29
SHANK2-211ENST00000449833 KIAA0753Q2KHM9 967 aa13.26□□□□□ -0.29
SHANK2-211ENST00000449833 RASSF2P50749 326 aa13.26□□□□□ -0.29
SHANK2-211ENST00000449833 PYM1Q9BRP8 204 aaKnown RBP13.26□□□□□ -0.29
SHANK2-211ENST00000449833 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.26□□□□□ -0.29
SHANK2-211ENST00000449833 FYCO1Q9BQS8 1478 aa13.26□□□□□ -0.29
SHANK2-211ENST00000449833 SLU7O95391 586 aaKnown RBP13.26□□□□□ -0.29
SHANK2-211ENST00000449833 DDX19AQ9NUU7 478 aaKnown RBP13.26□□□□□ -0.29
SHANK2-211ENST00000449833 ATP5DP30049 168 aa13.26□□□□□ -0.29
SHANK2-211ENST00000449833 MAP7D1Q3KQU3 841 aa13.26□□□□□ -0.29
SHANK2-211ENST00000449833 SSX2IPQ9Y2D8 614 aa13.26□□□□□ -0.29
SHANK2-211ENST00000449833 RNF10Q8N5U6 811 aaKnown RBP13.26□□□□□ -0.29
SHANK2-211ENST00000449833 POLE3Q9NRF9 147 aa13.26□□□□□ -0.29
SHANK2-211ENST00000449833 PSMD7P51665 324 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms