RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 PDRG1Q9NUG6 133 aa16.58■□□□□ 0.24
VPS52-212ENST00000445902 TRMT1Q9NXH9 659 aaKnown RBP16.58■□□□□ 0.24
VPS52-212ENST00000445902 NAP1L2Q9ULW6 460 aaPredicted RBP16.58■□□□□ 0.24
VPS52-212ENST00000445902 PAXBP1Q9Y5B6 917 aa16.58■□□□□ 0.24
VPS52-212ENST00000445902 SURF6O75683 361 aaKnown RBP16.57■□□□□ 0.24
VPS52-212ENST00000445902 ELF2Q15723 593 aa16.57■□□□□ 0.24
VPS52-212ENST00000445902 PREX1Q8TCU6 1659 aa16.57■□□□□ 0.24
VPS52-212ENST00000445902 KRT85P78386 507 aa16.57■□□□□ 0.24
VPS52-212ENST00000445902 SYCP1Q15431 976 aa16.57■□□□□ 0.24
VPS52-212ENST00000445902 LARP1BQ659C4 914 aaKnown RBP16.57■□□□□ 0.24
VPS52-212ENST00000445902 COL9A3Q14050 684 aaPredicted RBP16.56■□□□□ 0.24
VPS52-212ENST00000445902 ME3Q16798 604 aa16.56■□□□□ 0.24
VPS52-212ENST00000445902 PLA2G4DQ86XP0 818 aa16.56■□□□□ 0.24
VPS52-212ENST00000445902 TCEANC2Q96MN5 208 aa16.56■□□□□ 0.24
VPS52-212ENST00000445902 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
VPS52-212ENST00000445902 GNAI3P08754 354 aa16.56■□□□□ 0.24
VPS52-212ENST00000445902 PTH1RQ03431 593 aa16.56■□□□□ 0.24
VPS52-212ENST00000445902 FBXO38Q6PIJ6 1188 aa16.56■□□□□ 0.24
VPS52-212ENST00000445902 ZNF165P49910 485 aa16.56■□□□□ 0.24
VPS52-212ENST00000445902 FLIIQ13045 1269 aa16.56■□□□□ 0.24
VPS52-212ENST00000445902 PI4K2BQ8TCG2 481 aa16.56■□□□□ 0.24
VPS52-212ENST00000445902 ATP7BP35670 1465 aa16.55■□□□□ 0.24
VPS52-212ENST00000445902 PLCD3Q8N3E9 789 aa16.55■□□□□ 0.24
VPS52-212ENST00000445902 ZNF397Q8NF99 534 aaPredicted RBP16.55■□□□□ 0.24
VPS52-212ENST00000445902 CPS1P31327 1500 aa16.54■□□□□ 0.24
VPS52-212ENST00000445902 A0A087WWV3 80 aa16.54■□□□□ 0.24
VPS52-212ENST00000445902 SYTL4Q96C24 671 aaPredicted RBP16.54■□□□□ 0.24
VPS52-212ENST00000445902 NR1I2O75469 434 aa16.53■□□□□ 0.24
VPS52-212ENST00000445902 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
VPS52-212ENST00000445902 SPATA32Q96LK8 384 aa16.53■□□□□ 0.24
VPS52-212ENST00000445902 CCDC66A2RUB6 948 aa16.53■□□□□ 0.24
VPS52-212ENST00000445902 UBTFL1P0CB47 393 aaPredicted RBP16.53■□□□□ 0.24
VPS52-212ENST00000445902 FILIP1Q7Z7B0 1213 aa16.53■□□□□ 0.24
VPS52-212ENST00000445902 CNTROBQ8N137 903 aa16.53■□□□□ 0.24
VPS52-212ENST00000445902 BICD2Q8TD16 824 aa16.53■□□□□ 0.24
VPS52-212ENST00000445902 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
VPS52-212ENST00000445902 EDC4Q6P2E9 1401 aaKnown RBP16.53■□□□□ 0.24
VPS52-212ENST00000445902 RBM6P78332 1123 aaKnown RBP16.53■□□□□ 0.24
VPS52-212ENST00000445902 PTPN14Q15678 1187 aa16.53■□□□□ 0.24
VPS52-212ENST00000445902 PPP1R42Q7Z4L9 355 aa16.53■□□□□ 0.24
VPS52-212ENST00000445902 TPCN1Q9ULQ1 816 aa16.53■□□□□ 0.24
VPS52-212ENST00000445902 CYP46A1Q9Y6A2 500 aa16.53■□□□□ 0.24
VPS52-212ENST00000445902 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.24
VPS52-212ENST00000445902 CRB1P82279 1406 aa16.52■□□□□ 0.24
VPS52-212ENST00000445902 RHPN1Q8TCX5 695 aa16.52■□□□□ 0.24
VPS52-212ENST00000445902 STK3Q13188 491 aa16.52■□□□□ 0.23
VPS52-212ENST00000445902 LRRC8AQ8IWT6 810 aa16.52■□□□□ 0.23
VPS52-212ENST00000445902 USP44Q9H0E7 712 aa16.52■□□□□ 0.23
VPS52-212ENST00000445902 RIMS1Q86UR5 1692 aaKnown RBP16.51■□□□□ 0.23
VPS52-212ENST00000445902 RAPGEF3O95398 923 aa16.51■□□□□ 0.23
VPS52-212ENST00000445902 TDRD7Q8NHU6 1098 aaKnown RBP16.51■□□□□ 0.23
VPS52-212ENST00000445902 GTF3C6Q969F1 213 aa16.51■□□□□ 0.23
VPS52-212ENST00000445902 FBXW7Q969H0 707 aa16.51■□□□□ 0.23
VPS52-212ENST00000445902 TIGD1Q96MW7 591 aa16.51■□□□□ 0.23
VPS52-212ENST00000445902 USP16Q9Y5T5 823 aa16.51■□□□□ 0.23
VPS52-212ENST00000445902 ALKQ9UM73 1620 aa16.51■□□□□ 0.23
VPS52-212ENST00000445902 SKILP12757 684 aa16.51■□□□□ 0.23
VPS52-212ENST00000445902 AATKQ6ZMQ8 1374 aa16.51■□□□□ 0.23
VPS52-212ENST00000445902 VPS53Q5VIR6 699 aa16.5■□□□□ 0.23
VPS52-212ENST00000445902 FBXO31Q5XUX0 539 aaPredicted RBP16.5■□□□□ 0.23
VPS52-212ENST00000445902 CEBPZQ03701 1054 aaKnown RBP16.5■□□□□ 0.23
VPS52-212ENST00000445902 AOX1Q06278 1338 aa16.5■□□□□ 0.23
VPS52-212ENST00000445902 SRGAP3O43295 1099 aa16.5■□□□□ 0.23
VPS52-212ENST00000445902 MTHFSDQ2M296 383 aaKnown RBP16.5■□□□□ 0.23
VPS52-212ENST00000445902 CLSTN2Q9H4D0 955 aa16.5■□□□□ 0.23
VPS52-212ENST00000445902 ZNF446Q9NWS9 450 aa16.5■□□□□ 0.23
VPS52-212ENST00000445902 LARP1Q6PKG0 1096 aaKnown RBP16.49■□□□□ 0.23
VPS52-212ENST00000445902 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.49■□□□□ 0.23
VPS52-212ENST00000445902 GOLGA6L19H0YKK7 550 aa16.49■□□□□ 0.23
VPS52-212ENST00000445902 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
VPS52-212ENST00000445902 C11orf57Q6ZUT1 292 aaPredicted RBP16.49■□□□□ 0.23
VPS52-212ENST00000445902 LEO1Q8WVC0 666 aaPredicted RBP16.49■□□□□ 0.23
VPS52-212ENST00000445902 SH2B1Q9NRF2 756 aaPredicted RBP16.49■□□□□ 0.23
VPS52-212ENST00000445902 SLC52A1Q9NWF4 448 aa16.49■□□□□ 0.23
VPS52-212ENST00000445902 ERBB3P21860 1342 aa16.48■□□□□ 0.23
VPS52-212ENST00000445902 NUTM2FA1L443 756 aa16.48■□□□□ 0.23
VPS52-212ENST00000445902 LRRN4CLQ8ND94 238 aa16.48■□□□□ 0.23
VPS52-212ENST00000445902 NUDT16Q96DE0 195 aaKnown RBP16.48■□□□□ 0.23
VPS52-212ENST00000445902 DDX11Q96FC9 970 aa16.48■□□□□ 0.23
VPS52-212ENST00000445902 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
VPS52-212ENST00000445902 TTC21AQ8NDW8 1320 aa16.48■□□□□ 0.23
VPS52-212ENST00000445902 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
VPS52-212ENST00000445902 PGBD1Q96JS3 809 aa16.48■□□□□ 0.23
VPS52-212ENST00000445902 ZSWIM6Q9HCJ5 1215 aa16.48■□□□□ 0.23
VPS52-212ENST00000445902 EPB41L2O43491 1005 aaKnown RBP16.47■□□□□ 0.23
VPS52-212ENST00000445902 OS9Q13438 667 aaPredicted RBP16.47■□□□□ 0.23
VPS52-212ENST00000445902 DDX19AQ9NUU7 478 aaKnown RBP16.47■□□□□ 0.23
VPS52-212ENST00000445902 CCDC171Q6TFL3 1326 aa16.47■□□□□ 0.23
VPS52-212ENST00000445902 WASLO00401 505 aaPredicted RBP16.47■□□□□ 0.23
VPS52-212ENST00000445902 ERCC6LQ2NKX8 1250 aa16.47■□□□□ 0.23
VPS52-212ENST00000445902 SSH3Q8TE77 659 aa16.47■□□□□ 0.23
VPS52-212ENST00000445902 NPHP3Q7Z494 1330 aa16.47■□□□□ 0.23
VPS52-212ENST00000445902 TMEM131LA2VDJ0 1609 aa16.47■□□□□ 0.23
VPS52-212ENST00000445902 NYAP1Q6ZVC0 841 aa16.47■□□□□ 0.23
VPS52-212ENST00000445902 ERCC4Q92889 916 aaPredicted RBP16.47■□□□□ 0.23
VPS52-212ENST00000445902 PHAXQ9H814 394 aaKnown RBP16.47■□□□□ 0.23
VPS52-212ENST00000445902 ELP1O95163 1332 aa16.46■□□□□ 0.23
VPS52-212ENST00000445902 CAPN2P17655 700 aa16.46■□□□□ 0.23
VPS52-212ENST00000445902 FOSBP53539 338 aa16.46■□□□□ 0.23
VPS52-212ENST00000445902 ERO1AQ96HE7 468 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms