RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 ANKRD31Q8N7Z5 1873 aa24.49■■□□□ 1.51
HDAC4-203ENST00000445704 ANXA1P04083 346 aa24.49■■□□□ 1.51
HDAC4-203ENST00000445704 PRR5LQ6MZQ0 368 aa24.49■■□□□ 1.51
HDAC4-203ENST00000445704 CCDC24Q8N4L8 307 aa24.49■■□□□ 1.51
HDAC4-203ENST00000445704 IFT57Q9NWB7 429 aa24.49■■□□□ 1.51
HDAC4-203ENST00000445704 BCS1LQ9Y276 419 aa24.49■■□□□ 1.51
HDAC4-203ENST00000445704 ZNF652Q9Y2D9 606 aa24.49■■□□□ 1.51
HDAC4-203ENST00000445704 RGL2O15211 777 aa24.48■■□□□ 1.51
HDAC4-203ENST00000445704 MAP3K15Q6ZN16 1313 aa24.47■■□□□ 1.51
HDAC4-203ENST00000445704 DLEC1Q9Y238 1755 aa24.47■■□□□ 1.51
HDAC4-203ENST00000445704 GNAI1P63096 354 aa24.46■■□□□ 1.51
HDAC4-203ENST00000445704 CALD1Q05682 793 aaKnown RBP24.46■■□□□ 1.51
HDAC4-203ENST00000445704 NUP98P52948 1817 aa24.45■■□□□ 1.5
HDAC4-203ENST00000445704 ERVV-1B6SEH8 477 aa24.45■■□□□ 1.5
HDAC4-203ENST00000445704 CCDC27Q2M243 656 aa24.45■■□□□ 1.5
HDAC4-203ENST00000445704 KIF6Q6ZMV9 814 aa24.45■■□□□ 1.5
HDAC4-203ENST00000445704 ZBTB3Q9H5J0 574 aa24.45■■□□□ 1.5
HDAC4-203ENST00000445704 PIM2Q9P1W9 311 aa24.45■■□□□ 1.5
HDAC4-203ENST00000445704 NIP7Q9Y221 180 aaKnown RBP eCLIP24.45■■□□□ 1.5
HDAC4-203ENST00000445704 COL11A2P13942 1736 aaPredicted RBP24.44■■□□□ 1.5
HDAC4-203ENST00000445704 WWC1Q8IX03 1113 aa24.44■■□□□ 1.5
HDAC4-203ENST00000445704 FAM9BQ8IZU0 186 aa24.44■■□□□ 1.5
HDAC4-203ENST00000445704 CNBD1Q8NA66 436 aa24.44■■□□□ 1.5
HDAC4-203ENST00000445704 ARFGEF1Q9Y6D6 1849 aa24.43■■□□□ 1.5
HDAC4-203ENST00000445704 HOXB7P09629 217 aa24.43■■□□□ 1.5
HDAC4-203ENST00000445704 HDGFL1Q5TGJ6 251 aa24.43■■□□□ 1.5
HDAC4-203ENST00000445704 DUSP27Q5VZP5 1158 aa24.43■■□□□ 1.5
HDAC4-203ENST00000445704 ATP10DQ9P241 1426 aa24.43■■□□□ 1.5
HDAC4-203ENST00000445704 C2CD5Q86YS7 1000 aa24.42■■□□□ 1.5
HDAC4-203ENST00000445704 BRIP1Q9BX63 1249 aa24.42■■□□□ 1.5
HDAC4-203ENST00000445704 CHPF2Q9P2E5 772 aa24.42■■□□□ 1.5
HDAC4-203ENST00000445704 DALRD3Q5D0E6 543 aaKnown RBP24.41■■□□□ 1.5
HDAC4-203ENST00000445704 NBPF5PQ86XG9 351 aaPredicted RBP24.41■■□□□ 1.5
HDAC4-203ENST00000445704 DDX21Q9NR30 783 aaKnown RBP eCLIP24.41■■□□□ 1.5
HDAC4-203ENST00000445704 FAM177BA6PVY3 158 aa24.4■■□□□ 1.5
HDAC4-203ENST00000445704 NCBP3Q53F19 620 aaKnown RBP24.4■■□□□ 1.5
HDAC4-203ENST00000445704 NPHP1O15259 732 aa24.39■■□□□ 1.49
HDAC4-203ENST00000445704 ST5P78524 1137 aa24.39■■□□□ 1.49
HDAC4-203ENST00000445704 GIGYF2Q6Y7W6 1299 aaKnown RBP24.39■■□□□ 1.49
HDAC4-203ENST00000445704 COPS6Q7L5N1 327 aa24.39■■□□□ 1.49
HDAC4-203ENST00000445704 C8orf58Q8NAV2 365 aa24.39■■□□□ 1.49
HDAC4-203ENST00000445704 ZNF784Q8NCA9 323 aaPredicted RBP24.39■■□□□ 1.49
HDAC4-203ENST00000445704 XAGE3Q8WTP9 111 aa24.39■■□□□ 1.49
HDAC4-203ENST00000445704 TSR2Q969E8 191 aaKnown RBP24.39■■□□□ 1.49
HDAC4-203ENST00000445704 SALL2Q9Y467 1007 aaPredicted RBP24.39■■□□□ 1.49
HDAC4-203ENST00000445704 UBN2Q6ZU65 1347 aa24.38■■□□□ 1.49
HDAC4-203ENST00000445704 H0YIN7 160 aa24.38■■□□□ 1.49
HDAC4-203ENST00000445704 ELL2O00472 640 aaPredicted RBP24.38■■□□□ 1.49
HDAC4-203ENST00000445704 GPTP24298 496 aa24.38■■□□□ 1.49
HDAC4-203ENST00000445704 PDE6BP35913 854 aa24.38■■□□□ 1.49
HDAC4-203ENST00000445704 AIMP1Q12904 312 aaKnown RBP24.38■■□□□ 1.49
HDAC4-203ENST00000445704 TPTE2Q6XPS3 522 aa24.36■■□□□ 1.49
HDAC4-203ENST00000445704 ARHGAP27Q6ZUM4 889 aa24.36■■□□□ 1.49
HDAC4-203ENST00000445704 ZNF34Q8IZ26 560 aa24.36■■□□□ 1.49
HDAC4-203ENST00000445704 TNRC6CQ9HCJ0 1690 aaKnown RBP24.35■■□□□ 1.49
HDAC4-203ENST00000445704 ABCC12Q96J65 1359 aa24.35■■□□□ 1.49
HDAC4-203ENST00000445704 TSPYL6Q8N831 410 aa24.35■■□□□ 1.49
HDAC4-203ENST00000445704 DBF4Q9UBU7 674 aaPredicted RBP24.35■■□□□ 1.49
HDAC4-203ENST00000445704 IL16Q14005 1332 aa24.35■■□□□ 1.49
HDAC4-203ENST00000445704 ADCY9O60503 1353 aa24.34■■□□□ 1.49
HDAC4-203ENST00000445704 SUSD4Q5VX71 490 aa24.34■■□□□ 1.49
HDAC4-203ENST00000445704 TTLL6Q8N841 843 aa24.34■■□□□ 1.49
HDAC4-203ENST00000445704 PDZRN3Q9UPQ7 1066 aa24.34■■□□□ 1.49
HDAC4-203ENST00000445704 ANKRD36CQ5JPF3 1778 aa24.34■■□□□ 1.49
HDAC4-203ENST00000445704 IBTKQ9P2D0 1353 aaPredicted RBP24.33■■□□□ 1.49
HDAC4-203ENST00000445704 SRGNP10124 158 aa24.33■■□□□ 1.49
HDAC4-203ENST00000445704 NUTM1Q86Y26 1132 aa24.33■■□□□ 1.49
HDAC4-203ENST00000445704 ZNF622Q969S3 477 aaKnown RBP eCLIP24.33■■□□□ 1.49
HDAC4-203ENST00000445704 NTSR2O95665 410 aa24.31■■□□□ 1.48
HDAC4-203ENST00000445704 ERFEQ4G0M1 354 aa24.31■■□□□ 1.48
HDAC4-203ENST00000445704 NYXQ9GZU5 481 aa24.31■■□□□ 1.48
HDAC4-203ENST00000445704 KLRG2A4D1S0 409 aaPredicted RBP24.3■■□□□ 1.48
HDAC4-203ENST00000445704 WDR63Q8IWG1 891 aa24.3■■□□□ 1.48
HDAC4-203ENST00000445704 HYPKQ9NX55 129 aa24.3■■□□□ 1.48
HDAC4-203ENST00000445704 FANCIQ9NVI1 1328 aa24.3■■□□□ 1.48
HDAC4-203ENST00000445704 CACNA1SQ13698 1873 aa24.3■■□□□ 1.48
HDAC4-203ENST00000445704 GTF2E1P29083 439 aaPredicted RBP24.29■■□□□ 1.48
HDAC4-203ENST00000445704 STYK1Q6J9G0 422 aa24.29■■□□□ 1.48
HDAC4-203ENST00000445704 ARFGEF2Q9Y6D5 1785 aa24.29■■□□□ 1.48
HDAC4-203ENST00000445704 PARP10Q53GL7 1025 aa24.28■■□□□ 1.48
HDAC4-203ENST00000445704 PLBD2Q8NHP8 589 aa24.28■■□□□ 1.48
HDAC4-203ENST00000445704 MASTLQ96GX5 879 aa24.28■■□□□ 1.48
HDAC4-203ENST00000445704 PHAXQ9H814 394 aaKnown RBP24.28■■□□□ 1.48
HDAC4-203ENST00000445704 SPINK5Q9NQ38 1064 aaPredicted RBP24.28■■□□□ 1.48
HDAC4-203ENST00000445704 SLX4Q8IY92 1834 aa24.28■■□□□ 1.48
HDAC4-203ENST00000445704 RIC1Q4ADV7 1423 aa24.27■■□□□ 1.48
HDAC4-203ENST00000445704 TCIRG1Q13488 830 aa24.27■■□□□ 1.48
HDAC4-203ENST00000445704 HSP90AB3PQ58FF7 597 aa24.27■■□□□ 1.48
HDAC4-203ENST00000445704 ANKRD13DQ6ZTN6 518 aa24.27■■□□□ 1.48
HDAC4-203ENST00000445704 RASSF7Q02833 373 aa24.26■■□□□ 1.47
HDAC4-203ENST00000445704 TWISTNBQ3B726 338 aaPredicted RBP24.26■■□□□ 1.47
HDAC4-203ENST00000445704 PPP1R42Q7Z4L9 355 aa24.26■■□□□ 1.47
HDAC4-203ENST00000445704 CNKSR1Q969H4 720 aa24.26■■□□□ 1.47
HDAC4-203ENST00000445704 ZNF219Q9P2Y4 722 aaPredicted RBP24.26■■□□□ 1.47
HDAC4-203ENST00000445704 CCER2I3L3R5 266 aa24.25■■□□□ 1.47
HDAC4-203ENST00000445704 C21orf2O43822 256 aa24.25■■□□□ 1.47
HDAC4-203ENST00000445704 NPR1P16066 1061 aa24.25■■□□□ 1.47
HDAC4-203ENST00000445704 CCDC30Q5VVM6 783 aa24.25■■□□□ 1.47
HDAC4-203ENST00000445704 PRPF40BQ6NWY9 871 aaKnown RBP24.25■■□□□ 1.47
HDAC4-203ENST00000445704 NLRP10Q86W26 655 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms