RNA–Protein interactions for RNA: ENST00000441665.1

AP002856.3-201, humanhuman

TSL 3 BASIC

Gene AP002856.3, Length 635 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.3-201ENST00000441665 RPS6KA4O75676 772 aa16.55■□□□□ 0.24
AP002856.3-201ENST00000441665 EFCAB3Q8N7B9 438 aa16.55■□□□□ 0.24
AP002856.3-201ENST00000441665 DALRD3Q5D0E6 543 aaKnown RBP16.54■□□□□ 0.24
AP002856.3-201ENST00000441665 RRAGCQ9HB90 399 aa16.54■□□□□ 0.24
AP002856.3-201ENST00000441665 ERVV-2B6SEH9 535 aa16.53■□□□□ 0.24
AP002856.3-201ENST00000441665 CDCA8Q53HL2 280 aa16.53■□□□□ 0.24
AP002856.3-201ENST00000441665 VARS2Q5ST30 1063 aaKnown RBP16.53■□□□□ 0.24
AP002856.3-201ENST00000441665 TMEM92Q6UXU6 159 aa16.53■□□□□ 0.24
AP002856.3-201ENST00000441665 RNF166Q96A37 237 aaPredicted RBP16.53■□□□□ 0.24
AP002856.3-201ENST00000441665 PRELPP51888 382 aa16.52■□□□□ 0.24
AP002856.3-201ENST00000441665 SMC1BQ8NDV3 1235 aa16.52■□□□□ 0.24
AP002856.3-201ENST00000441665 TJP1Q07157 1748 aa16.52■□□□□ 0.24
AP002856.3-201ENST00000441665 POLKQ9UBT6 870 aa16.51■□□□□ 0.23
AP002856.3-201ENST00000441665 HSP90AB1P08238 724 aaKnown RBP16.5■□□□□ 0.23
AP002856.3-201ENST00000441665 CHRNA5P30532 468 aa16.5■□□□□ 0.23
AP002856.3-201ENST00000441665 DDR1Q08345 913 aa16.5■□□□□ 0.23
AP002856.3-201ENST00000441665 EIF4A2Q14240 407 aaKnown RBP16.5■□□□□ 0.23
AP002856.3-201ENST00000441665 SRP68Q9UHB9 627 aaKnown RBP16.5■□□□□ 0.23
AP002856.3-201ENST00000441665 KDM6AO15550 1401 aaPredicted RBP16.5■□□□□ 0.23
AP002856.3-201ENST00000441665 ADAMTS7Q9UKP4 1686 aa16.5■□□□□ 0.23
AP002856.3-201ENST00000441665 USP42Q9H9J4 1324 aaKnown RBP16.49■□□□□ 0.23
AP002856.3-201ENST00000441665 RIMBP2O15034 1052 aa16.49■□□□□ 0.23
AP002856.3-201ENST00000441665 TIAM2Q8IVF5 1701 aa16.49■□□□□ 0.23
AP002856.3-201ENST00000441665 DLEC1Q9Y238 1755 aa16.49■□□□□ 0.23
AP002856.3-201ENST00000441665 ZC3H4Q9UPT8 1303 aaKnown RBP16.48■□□□□ 0.23
AP002856.3-201ENST00000441665 CCDC88AQ3V6T2 1871 aa16.48■□□□□ 0.23
AP002856.3-201ENST00000441665 AFDNP55196 1824 aaKnown RBP16.48■□□□□ 0.23
AP002856.3-201ENST00000441665 CRKLP46109 303 aaKnown RBP16.48■□□□□ 0.23
AP002856.3-201ENST00000441665 CABP4P57796 275 aa16.48■□□□□ 0.23
AP002856.3-201ENST00000441665 PTCD1O75127 700 aaKnown RBP16.47■□□□□ 0.23
AP002856.3-201ENST00000441665 HSPA1AP0DMV8 641 aaKnown RBP16.47■□□□□ 0.23
AP002856.3-201ENST00000441665 HSPA1BP0DMV9 641 aaKnown RBP16.47■□□□□ 0.23
AP002856.3-201ENST00000441665 MICALL2Q8IY33 904 aa16.47■□□□□ 0.23
AP002856.3-201ENST00000441665 POLRMTO00411 1230 aaKnown RBP16.46■□□□□ 0.23
AP002856.3-201ENST00000441665 RASSF7Q02833 373 aa16.46■□□□□ 0.23
AP002856.3-201ENST00000441665 PLEKHO1Q53GL0 409 aaPredicted RBP16.45■□□□□ 0.22
AP002856.3-201ENST00000441665 ZNF530Q6P9A1 599 aaPredicted RBP16.45■□□□□ 0.22
AP002856.3-201ENST00000441665 ZSWIM6Q9HCJ5 1215 aa16.44■□□□□ 0.22
AP002856.3-201ENST00000441665 NRXN2Q9P2S2 1712 aa16.44■□□□□ 0.22
AP002856.3-201ENST00000441665 SCN11AQ9UI33 1791 aa16.43■□□□□ 0.22
AP002856.3-201ENST00000441665 VEGFAP15692 232 aaPredicted RBP16.43■□□□□ 0.22
AP002856.3-201ENST00000441665 LMNB1P20700 586 aa16.43■□□□□ 0.22
AP002856.3-201ENST00000441665 TM4SF1P30408 202 aa16.43■□□□□ 0.22
AP002856.3-201ENST00000441665 TNNT2P45379 298 aaPredicted RBP16.43■□□□□ 0.22
AP002856.3-201ENST00000441665 GLTPD2A6NH11 291 aa16.42■□□□□ 0.22
AP002856.3-201ENST00000441665 MTHFSP49914 203 aa16.42■□□□□ 0.22
AP002856.3-201ENST00000441665 AMOTQ4VCS5 1084 aa16.42■□□□□ 0.22
AP002856.3-201ENST00000441665 GPR153Q6NV75 609 aa16.42■□□□□ 0.22
AP002856.3-201ENST00000441665 ZNF687Q8N1G0 1237 aa16.42■□□□□ 0.22
AP002856.3-201ENST00000441665 INTS5Q6P9B9 1019 aaKnown RBP16.41■□□□□ 0.22
AP002856.3-201ENST00000441665 NFATC2IPQ8NCF5 419 aa16.41■□□□□ 0.22
AP002856.3-201ENST00000441665 ZPR1O75312 459 aa16.4■□□□□ 0.22
AP002856.3-201ENST00000441665 C1orf141Q5JVX7 400 aa16.4■□□□□ 0.22
AP002856.3-201ENST00000441665 USPL1Q5W0Q7 1092 aa16.4■□□□□ 0.22
AP002856.3-201ENST00000441665 DICER1Q9UPY3 1922 aaKnown RBP16.39■□□□□ 0.21
AP002856.3-201ENST00000441665 VIRMAQ69YN4 1812 aaKnown RBP16.39■□□□□ 0.21
AP002856.3-201ENST00000441665 MS4A4AQ96JQ5 239 aa16.38■□□□□ 0.21
AP002856.3-201ENST00000441665 SOS1Q07889 1333 aaPredicted RBP16.38■□□□□ 0.21
AP002856.3-201ENST00000441665 NFIXQ14938 502 aa16.37■□□□□ 0.21
AP002856.3-201ENST00000441665 AEBP1Q8IUX7 1158 aa16.37■□□□□ 0.21
AP002856.3-201ENST00000441665 DNAJC10Q8IXB1 793 aa16.37■□□□□ 0.21
AP002856.3-201ENST00000441665 TTLL6Q8N841 843 aa16.37■□□□□ 0.21
AP002856.3-201ENST00000441665 NFKBIEO00221 500 aa16.36■□□□□ 0.21
AP002856.3-201ENST00000441665 COL15A1P39059 1388 aa16.36■□□□□ 0.21
AP002856.3-201ENST00000441665 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
AP002856.3-201ENST00000441665 POTECB2RU33 542 aa16.35■□□□□ 0.21
AP002856.3-201ENST00000441665 C2CD5Q86YS7 1000 aa16.35■□□□□ 0.21
AP002856.3-201ENST00000441665 NARFQ9UHQ1 456 aa16.35■□□□□ 0.21
AP002856.3-201ENST00000441665 CARMIL3Q8ND23 1372 aa16.35■□□□□ 0.21
AP002856.3-201ENST00000441665 ANKRD31Q8N7Z5 1873 aa16.35■□□□□ 0.21
AP002856.3-201ENST00000441665 SERPINB2P05120 415 aa16.34■□□□□ 0.21
AP002856.3-201ENST00000441665 COL11A2P13942 1736 aaPredicted RBP16.33■□□□□ 0.21
AP002856.3-201ENST00000441665 CYP19A1P11511 503 aaPredicted RBP16.33■□□□□ 0.2
AP002856.3-201ENST00000441665 BCL2L12Q9HB09 334 aa16.33■□□□□ 0.2
AP002856.3-201ENST00000441665 MRC1P22897 1456 aa16.33■□□□□ 0.2
AP002856.3-201ENST00000441665 H0YIN7 160 aa16.32■□□□□ 0.2
AP002856.3-201ENST00000441665 SULT6B1Q6IMI4 303 aa16.32■□□□□ 0.2
AP002856.3-201ENST00000441665 POLR3GLQ9BT43 218 aa16.32■□□□□ 0.2
AP002856.3-201ENST00000441665 MKRN1Q9UHC7 482 aaKnown RBP16.32■□□□□ 0.2
AP002856.3-201ENST00000441665 ZBTB1Q9Y2K1 713 aa16.32■□□□□ 0.2
AP002856.3-201ENST00000441665 CACNA1SQ13698 1873 aa16.31■□□□□ 0.2
AP002856.3-201ENST00000441665 SLC52A2Q9HAB3 445 aa16.31■□□□□ 0.2
AP002856.3-201ENST00000441665 UBR2Q8IWV8 1755 aa16.31■□□□□ 0.2
AP002856.3-201ENST00000441665 AKAP4Q5JQC9 854 aa16.3■□□□□ 0.2
AP002856.3-201ENST00000441665 SCN7AQ01118 1682 aa16.3■□□□□ 0.2
AP002856.3-201ENST00000441665 SLC39A6Q13433 755 aa16.29■□□□□ 0.2
AP002856.3-201ENST00000441665 ERFEQ4G0M1 354 aa16.29■□□□□ 0.2
AP002856.3-201ENST00000441665 FOXN1O15353 648 aa16.28■□□□□ 0.2
AP002856.3-201ENST00000441665 RNF25Q96BH1 459 aaPredicted RBP16.28■□□□□ 0.2
AP002856.3-201ENST00000441665 LGR6Q9HBX8 967 aa16.28■□□□□ 0.2
AP002856.3-201ENST00000441665 CNTNAP1P78357 1384 aa16.27■□□□□ 0.2
AP002856.3-201ENST00000441665 C21orf2O43822 256 aa16.27■□□□□ 0.2
AP002856.3-201ENST00000441665 BICDL1Q6ZP65 573 aa16.27■□□□□ 0.2
AP002856.3-201ENST00000441665 ZNF622Q969S3 477 aaKnown RBP eCLIP16.27■□□□□ 0.2
AP002856.3-201ENST00000441665 ARFGEF2Q9Y6D5 1785 aa16.27■□□□□ 0.2
AP002856.3-201ENST00000441665 RNMTO43148 476 aaKnown RBP16.26■□□□□ 0.19
AP002856.3-201ENST00000441665 CANXP27824 592 aaKnown RBP16.26■□□□□ 0.19
AP002856.3-201ENST00000441665 IL13P35225 146 aa16.26■□□□□ 0.19
AP002856.3-201ENST00000441665 ARSIQ5FYB1 569 aa16.26■□□□□ 0.19
AP002856.3-201ENST00000441665 VSIG10Q8N0Z9 540 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms