RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 SYNE4Q8N205 404 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 CHPF2Q9P2E5 772 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 NIP7Q9Y221 180 aaKnown RBP eCLIP6.02□□□□□ -1.45
EDEM3-203ENST00000439962 COL15A1P39059 1388 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 NCAPD2Q15021 1401 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 GIGYF1O75420 1035 aaPredicted RBP6.01□□□□□ -1.45
EDEM3-203ENST00000439962 OLFM4Q6UX06 510 aa6.01□□□□□ -1.45
EDEM3-203ENST00000439962 SPINK5Q9NQ38 1064 aaPredicted RBP6.01□□□□□ -1.45
EDEM3-203ENST00000439962 DPEP1P16444 411 aa6.01□□□□□ -1.45
EDEM3-203ENST00000439962 ARHGAP27Q6ZUM4 889 aa6.01□□□□□ -1.45
EDEM3-203ENST00000439962 COPS6Q7L5N1 327 aa6.01□□□□□ -1.45
EDEM3-203ENST00000439962 NBPF5PQ86XG9 351 aaPredicted RBP6.01□□□□□ -1.45
EDEM3-203ENST00000439962 NLGN1Q8N2Q7 840 aa6.01□□□□□ -1.45
EDEM3-203ENST00000439962 C8orf58Q8NAV2 365 aa6.01□□□□□ -1.45
EDEM3-203ENST00000439962 SETDB2Q96T68 719 aa6.01□□□□□ -1.45
EDEM3-203ENST00000439962 SGIP1Q9BQI5 828 aa6.01□□□□□ -1.45
EDEM3-203ENST00000439962 ZBTB47Q9UFB7 747 aaPredicted RBP6.01□□□□□ -1.45
EDEM3-203ENST00000439962 PKD1L3Q7Z443 1732 aa6.01□□□□□ -1.45
EDEM3-203ENST00000439962 SERPINB2P05120 415 aa6□□□□□ -1.45
EDEM3-203ENST00000439962 BRPF1P55201 1214 aaPredicted RBP6□□□□□ -1.45
EDEM3-203ENST00000439962 FLAD1Q8NFF5 587 aa6□□□□□ -1.45
EDEM3-203ENST00000439962 PHAXQ9H814 394 aaKnown RBP6□□□□□ -1.45
EDEM3-203ENST00000439962 USP42Q9H9J4 1324 aaKnown RBP6□□□□□ -1.45
EDEM3-203ENST00000439962 FAM161AQ3B820 660 aa6□□□□□ -1.45
EDEM3-203ENST00000439962 XAGE3Q8WTP9 111 aa6□□□□□ -1.45
EDEM3-203ENST00000439962 BCL2L12Q9HB09 334 aa6□□□□□ -1.45
EDEM3-203ENST00000439962 CEMIPQ8WUJ3 1361 aa6□□□□□ -1.45
EDEM3-203ENST00000439962 C4BP0C0L5 1744 aa6□□□□□ -1.45
EDEM3-203ENST00000439962 CALD1Q05682 793 aaKnown RBP6□□□□□ -1.45
EDEM3-203ENST00000439962 LMOD3Q0VAK6 560 aa6□□□□□ -1.45
EDEM3-203ENST00000439962 SLC16A10Q8TF71 515 aa6□□□□□ -1.45
EDEM3-203ENST00000439962 CHMP4BQ9H444 224 aaKnown RBP6□□□□□ -1.45
EDEM3-203ENST00000439962 SOS1Q07889 1333 aaPredicted RBP6□□□□□ -1.45
EDEM3-203ENST00000439962 EIF5P55010 431 aaKnown RBP5.99□□□□□ -1.45
EDEM3-203ENST00000439962 KIF6Q6ZMV9 814 aa5.99□□□□□ -1.45
EDEM3-203ENST00000439962 RREB1Q92766 1687 aa5.99□□□□□ -1.45
EDEM3-203ENST00000439962 CNTNAP4Q9C0A0 1308 aa5.99□□□□□ -1.45
EDEM3-203ENST00000439962 HCLS1P14317 486 aaPredicted RBP5.99□□□□□ -1.45
EDEM3-203ENST00000439962 CNBD1Q8NA66 436 aa5.99□□□□□ -1.45
EDEM3-203ENST00000439962 NARFQ9UHQ1 456 aa5.99□□□□□ -1.45
EDEM3-203ENST00000439962 C5P01031 1676 aa5.99□□□□□ -1.45
EDEM3-203ENST00000439962 CARMIL3Q8ND23 1372 aa5.98□□□□□ -1.45
EDEM3-203ENST00000439962 POLRMTO00411 1230 aaKnown RBP5.98□□□□□ -1.45
EDEM3-203ENST00000439962 C21orf2O43822 256 aa5.98□□□□□ -1.45
EDEM3-203ENST00000439962 RARSP54136 660 aaKnown RBP5.98□□□□□ -1.45
EDEM3-203ENST00000439962 EXOSC9Q06265 439 aaKnown RBP5.98□□□□□ -1.45
EDEM3-203ENST00000439962 RC3H1Q5TC82 1133 aaKnown RBP5.98□□□□□ -1.45
EDEM3-203ENST00000439962 SLC4A10Q6U841 1118 aa5.98□□□□□ -1.45
EDEM3-203ENST00000439962 CLUAP1Q96AJ1 413 aa5.98□□□□□ -1.45
EDEM3-203ENST00000439962 EIF5BO60841 1220 aaKnown RBP5.98□□□□□ -1.45
EDEM3-203ENST00000439962 CAMTA2O94983 1202 aa5.98□□□□□ -1.45
EDEM3-203ENST00000439962 ALDH1L2Q3SY69 923 aa5.98□□□□□ -1.45
EDEM3-203ENST00000439962 RIC3Q7Z5B4 369 aa5.98□□□□□ -1.45
EDEM3-203ENST00000439962 C2CD5Q86YS7 1000 aa5.98□□□□□ -1.45
EDEM3-203ENST00000439962 FAM89AQ96GI7 184 aa5.98□□□□□ -1.45
EDEM3-203ENST00000439962 CFAP44Q96MT7 982 aa5.98□□□□□ -1.45
EDEM3-203ENST00000439962 TEX13AQ9BXU3 409 aaPredicted RBP5.98□□□□□ -1.45
EDEM3-203ENST00000439962 SCN11AQ9UI33 1791 aa5.98□□□□□ -1.45
EDEM3-203ENST00000439962 DLG5Q8TDM6 1919 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 F6X3S4 739 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 SLC4A2P04920 1241 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 IL6STP40189 918 aaPredicted RBP5.97□□□□□ -1.45
EDEM3-203ENST00000439962 RASSF7Q02833 373 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 TUBGCP6Q96RT7 1819 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 CHL1O00533 1208 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 GNAI1P63096 354 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 TWISTNBQ3B726 338 aaPredicted RBP5.97□□□□□ -1.45
EDEM3-203ENST00000439962 ERFEQ4G0M1 354 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 PRR5LQ6MZQ0 368 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 G2E3Q7L622 706 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 VSIG10Q8N0Z9 540 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 KIF16BQ96L93 1317 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 KCPQ6ZWJ8 1503 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 LY75O60449 1722 aa5.97□□□□□ -1.45
EDEM3-203ENST00000439962 HTATSF1O43719 755 aaKnown RBP5.96□□□□□ -1.45
EDEM3-203ENST00000439962 ADRA2BP18089 450 aa5.96□□□□□ -1.45
EDEM3-203ENST00000439962 FKBP5Q13451 457 aaPredicted RBP5.96□□□□□ -1.45
EDEM3-203ENST00000439962 MYD88Q99836 296 aa5.96□□□□□ -1.45
EDEM3-203ENST00000439962 TRMT112Q9UI30 125 aaKnown RBP5.96□□□□□ -1.45
EDEM3-203ENST00000439962 TAF1LQ8IZX4 1826 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 H0YIN7 160 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 PLIN1O60240 522 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 CWF19L2Q2TBE0 894 aaKnown RBP5.96□□□□□ -1.46
EDEM3-203ENST00000439962 SUSD4Q5VX71 490 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 CHMP3Q9Y3E7 222 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 BRCA2P51587 3418 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 N4BP2Q86UW6 1770 aaPredicted RBP5.96□□□□□ -1.46
EDEM3-203ENST00000439962 ST5P78524 1137 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 PDIA6Q15084 440 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 C20orf194Q5TEA3 1177 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 ANKRD13DQ6ZTN6 518 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 C3orf67Q6ZVT6 689 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 ARHGAP45Q92619 1136 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 STK31Q9BXU1 1019 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 RWDD1Q9H446 243 aaPredicted RBP5.96□□□□□ -1.46
EDEM3-203ENST00000439962 PIM2Q9P1W9 311 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 ZNF652Q9Y2D9 606 aa5.96□□□□□ -1.46
EDEM3-203ENST00000439962 CICQ96RK0 1608 aaPredicted RBP5.95□□□□□ -1.46
EDEM3-203ENST00000439962 UBN2Q6ZU65 1347 aa5.95□□□□□ -1.46
EDEM3-203ENST00000439962 UBR3Q6ZT12 1888 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms