RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 IFT57Q9NWB7 429 aa31.27■■■□□ 2.6
CPNE1-217ENST00000439669 BRCA1P38398 1863 aaKnown RBP31.27■■■□□ 2.6
CPNE1-217ENST00000439669 HLFQ16534 295 aa31.26■■■□□ 2.59
CPNE1-217ENST00000439669 PRR5LQ6MZQ0 368 aa31.26■■■□□ 2.59
CPNE1-217ENST00000439669 CCDC24Q8N4L8 307 aa31.26■■■□□ 2.59
CPNE1-217ENST00000439669 NIP7Q9Y221 180 aaKnown RBP eCLIP31.26■■■□□ 2.59
CPNE1-217ENST00000439669 MAP3K15Q6ZN16 1313 aa31.25■■■□□ 2.59
CPNE1-217ENST00000439669 GNAI1P63096 354 aa31.25■■■□□ 2.59
CPNE1-217ENST00000439669 ANXA1P04083 346 aa31.24■■■□□ 2.59
CPNE1-217ENST00000439669 ZNF853P0CG23 659 aa31.24■■■□□ 2.59
CPNE1-217ENST00000439669 DALRD3Q5D0E6 543 aaKnown RBP31.24■■■□□ 2.59
CPNE1-217ENST00000439669 NBPF5PQ86XG9 351 aaPredicted RBP31.24■■■□□ 2.59
CPNE1-217ENST00000439669 ERVV-1B6SEH8 477 aa31.23■■■□□ 2.59
CPNE1-217ENST00000439669 ST5P78524 1137 aa31.23■■■□□ 2.59
CPNE1-217ENST00000439669 PDIA6Q15084 440 aa31.23■■■□□ 2.59
CPNE1-217ENST00000439669 PROSER3Q2NL68 480 aa31.23■■■□□ 2.59
CPNE1-217ENST00000439669 C2CD5Q86YS7 1000 aa31.23■■■□□ 2.59
CPNE1-217ENST00000439669 ZBTB3Q9H5J0 574 aa31.23■■■□□ 2.59
CPNE1-217ENST00000439669 HOXB7P09629 217 aa31.21■■■□□ 2.59
CPNE1-217ENST00000439669 HDGFL1Q5TGJ6 251 aa31.21■■■□□ 2.59
CPNE1-217ENST00000439669 FAM9BQ8IZU0 186 aa31.21■■■□□ 2.59
CPNE1-217ENST00000439669 BRIP1Q9BX63 1249 aa31.21■■■□□ 2.59
CPNE1-217ENST00000439669 UTRNP46939 3433 aa31.21■■■□□ 2.59
CPNE1-217ENST00000439669 FAM177BA6PVY3 158 aa31.2■■■□□ 2.59
CPNE1-217ENST00000439669 H0YIN7 160 aa31.2■■■□□ 2.59
CPNE1-217ENST00000439669 CCDC27Q2M243 656 aa31.2■■■□□ 2.59
CPNE1-217ENST00000439669 DUSP27Q5VZP5 1158 aa31.2■■■□□ 2.59
CPNE1-217ENST00000439669 GOLGB1Q14789 3259 aaKnown RBP31.2■■■□□ 2.59
CPNE1-217ENST00000439669 ANKRD31Q8N7Z5 1873 aa31.2■■■□□ 2.58
CPNE1-217ENST00000439669 PDE6BP35913 854 aa31.19■■■□□ 2.58
CPNE1-217ENST00000439669 LRP10Q7Z4F1 713 aa31.19■■■□□ 2.58
CPNE1-217ENST00000439669 ARHGAP27Q6ZUM4 889 aa31.18■■■□□ 2.58
CPNE1-217ENST00000439669 WWC1Q8IX03 1113 aa31.18■■■□□ 2.58
CPNE1-217ENST00000439669 ZNF784Q8NCA9 323 aaPredicted RBP31.18■■■□□ 2.58
CPNE1-217ENST00000439669 DDX21Q9NR30 783 aaKnown RBP eCLIP31.18■■■□□ 2.58
CPNE1-217ENST00000439669 DLEC1Q9Y238 1755 aa31.17■■■□□ 2.58
CPNE1-217ENST00000439669 CHPF2Q9P2E5 772 aa31.17■■■□□ 2.58
CPNE1-217ENST00000439669 NUP98P52948 1817 aa31.17■■■□□ 2.58
CPNE1-217ENST00000439669 ARFGEF1Q9Y6D6 1849 aa31.17■■■□□ 2.58
CPNE1-217ENST00000439669 ATP10DQ9P241 1426 aa31.16■■■□□ 2.58
CPNE1-217ENST00000439669 AIMP1Q12904 312 aaKnown RBP31.16■■■□□ 2.58
CPNE1-217ENST00000439669 TPTE2Q6XPS3 522 aa31.16■■■□□ 2.58
CPNE1-217ENST00000439669 PDZRN3Q9UPQ7 1066 aa31.16■■■□□ 2.58
CPNE1-217ENST00000439669 GPTP24298 496 aa31.15■■■□□ 2.58
CPNE1-217ENST00000439669 XAGE3Q8WTP9 111 aa31.15■■■□□ 2.58
CPNE1-217ENST00000439669 SALL2Q9Y467 1007 aaPredicted RBP31.15■■■□□ 2.58
CPNE1-217ENST00000439669 GTF2E1P29083 439 aaPredicted RBP31.14■■■□□ 2.58
CPNE1-217ENST00000439669 GIGYF2Q6Y7W6 1299 aaKnown RBP31.14■■■□□ 2.58
CPNE1-217ENST00000439669 COPS6Q7L5N1 327 aa31.14■■■□□ 2.58
CPNE1-217ENST00000439669 TTLL6Q8N841 843 aa31.14■■■□□ 2.58
CPNE1-217ENST00000439669 ZNF622Q969S3 477 aaKnown RBP eCLIP31.14■■■□□ 2.582e-6■■■□□ 15.2
CPNE1-217ENST00000439669 ELL2O00472 640 aaPredicted RBP31.13■■■□□ 2.57
CPNE1-217ENST00000439669 COL11A2P13942 1736 aaPredicted RBP31.12■■■□□ 2.57
CPNE1-217ENST00000439669 NCBP3Q53F19 620 aaKnown RBP31.12■■■□□ 2.57
CPNE1-217ENST00000439669 DBF4Q9UBU7 674 aaPredicted RBP31.12■■■□□ 2.57
CPNE1-217ENST00000439669 TSR2Q969E8 191 aaKnown RBP31.11■■■□□ 2.57
CPNE1-217ENST00000439669 NYXQ9GZU5 481 aa31.11■■■□□ 2.57
CPNE1-217ENST00000439669 UBN2Q6ZU65 1347 aa31.1■■■□□ 2.57
CPNE1-217ENST00000439669 C8orf58Q8NAV2 365 aa31.09■■■□□ 2.57
CPNE1-217ENST00000439669 IL16Q14005 1332 aa31.08■■■□□ 2.57
CPNE1-217ENST00000439669 ZNF34Q8IZ26 560 aa31.08■■■□□ 2.57
CPNE1-217ENST00000439669 NUTM1Q86Y26 1132 aa31.07■■■□□ 2.56
CPNE1-217ENST00000439669 HYPKQ9NX55 129 aa31.07■■■□□ 2.56
CPNE1-217ENST00000439669 SRGNP10124 158 aa31.06■■■□□ 2.56
CPNE1-217ENST00000439669 HSP90AB3PQ58FF7 597 aa31.06■■■□□ 2.56
CPNE1-217ENST00000439669 SUSD4Q5VX71 490 aa31.06■■■□□ 2.56
CPNE1-217ENST00000439669 STYK1Q6J9G0 422 aa31.06■■■□□ 2.56
CPNE1-217ENST00000439669 ADCY9O60503 1353 aa31.05■■■□□ 2.56
CPNE1-217ENST00000439669 ABCC12Q96J65 1359 aa31.05■■■□□ 2.56
CPNE1-217ENST00000439669 IBTKQ9P2D0 1353 aaPredicted RBP31.05■■■□□ 2.56
CPNE1-217ENST00000439669 PARP10Q53GL7 1025 aa31.05■■■□□ 2.56
CPNE1-217ENST00000439669 MASTLQ96GX5 879 aa31.05■■■□□ 2.56
CPNE1-217ENST00000439669 ERFEQ4G0M1 354 aa31.04■■■□□ 2.56
CPNE1-217ENST00000439669 CNKSR1Q969H4 720 aa31.04■■■□□ 2.56
CPNE1-217ENST00000439669 PPP1R42Q7Z4L9 355 aa31.03■■■□□ 2.56
CPNE1-217ENST00000439669 WDR63Q8IWG1 891 aa31.03■■■□□ 2.56
CPNE1-217ENST00000439669 TSPYL6Q8N831 410 aa31.03■■■□□ 2.56
CPNE1-217ENST00000439669 ZNF219Q9P2Y4 722 aaPredicted RBP31.03■■■□□ 2.56
CPNE1-217ENST00000439669 PLBD2Q8NHP8 589 aa31.02■■■□□ 2.56
CPNE1-217ENST00000439669 NTSR2O95665 410 aa31.01■■■□□ 2.55
CPNE1-217ENST00000439669 NPR1P16066 1061 aa31.01■■■□□ 2.55
CPNE1-217ENST00000439669 CCDC30Q5VVM6 783 aa31.01■■■□□ 2.55
CPNE1-217ENST00000439669 CHMP4AQ9BY43 222 aa31.01■■■□□ 2.55
CPNE1-217ENST00000439669 ANKRD36CQ5JPF3 1778 aa31.01■■■□□ 2.55
CPNE1-217ENST00000439669 TNRC6CQ9HCJ0 1690 aaKnown RBP31■■■□□ 2.55
CPNE1-217ENST00000439669 KLRG2A4D1S0 409 aaPredicted RBP31■■■□□ 2.55
CPNE1-217ENST00000439669 TCIRG1Q13488 830 aa31■■■□□ 2.55
CPNE1-217ENST00000439669 C9orf131Q5VYM1 1079 aa31■■■□□ 2.55
CPNE1-217ENST00000439669 PRPF40BQ6NWY9 871 aaKnown RBP31■■■□□ 2.55
CPNE1-217ENST00000439669 ANKRD13DQ6ZTN6 518 aa31■■■□□ 2.55
CPNE1-217ENST00000439669 UTP14AQ9BVJ6 771 aaKnown RBP31■■■□□ 2.55
CPNE1-217ENST00000439669 FANCIQ9NVI1 1328 aa30.99■■■□□ 2.55
CPNE1-217ENST00000439669 C21orf2O43822 256 aa30.99■■■□□ 2.55
CPNE1-217ENST00000439669 RASSF7Q02833 373 aa30.99■■■□□ 2.55
CPNE1-217ENST00000439669 ZNF526Q8TF50 670 aaPredicted RBP30.99■■■□□ 2.55
CPNE1-217ENST00000439669 CACNA1SQ13698 1873 aa30.99■■■□□ 2.55
CPNE1-217ENST00000439669 GOLGA2Q08379 1002 aa30.97■■■□□ 2.55
CPNE1-217ENST00000439669 TWISTNBQ3B726 338 aaPredicted RBP30.97■■■□□ 2.55
CPNE1-217ENST00000439669 NLRP10Q86W26 655 aa30.97■■■□□ 2.55
CPNE1-217ENST00000439669 PHAXQ9H814 394 aaKnown RBP30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms