RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 C16orf71Q8IYS4 520 aaPredicted RBP24.3■■□□□ 1.48
AC004540.1-201ENST00000439120 TOMM70O94826 608 aa24.29■■□□□ 1.48
AC004540.1-201ENST00000439120 HSPA6P17066 643 aa24.29■■□□□ 1.48
AC004540.1-201ENST00000439120 NIP7Q9Y221 180 aaKnown RBP eCLIP24.29■■□□□ 1.48
AC004540.1-201ENST00000439120 RGL2O15211 777 aa24.28■■□□□ 1.48
AC004540.1-201ENST00000439120 RIPK4P57078 832 aa24.28■■□□□ 1.48
AC004540.1-201ENST00000439120 EIF4A1P60842 406 aaKnown RBP24.28■■□□□ 1.48
AC004540.1-201ENST00000439120 LMOD3Q0VAK6 560 aa24.28■■□□□ 1.48
AC004540.1-201ENST00000439120 NGEFQ8N5V2 710 aa24.28■■□□□ 1.48
AC004540.1-201ENST00000439120 ZNF219Q9P2Y4 722 aaPredicted RBP24.28■■□□□ 1.48
AC004540.1-201ENST00000439120 CNKSR1Q969H4 720 aa24.27■■□□□ 1.48
AC004540.1-201ENST00000439120 TSPYL4Q9UJ04 414 aa24.27■■□□□ 1.48
AC004540.1-201ENST00000439120 ZC3H4Q9UPT8 1303 aaKnown RBP24.27■■□□□ 1.48
AC004540.1-201ENST00000439120 C21orf2O43822 256 aa24.26■■□□□ 1.47
AC004540.1-201ENST00000439120 WDR43Q15061 677 aaKnown RBP eCLIP24.26■■□□□ 1.47
AC004540.1-201ENST00000439120 STYK1Q6J9G0 422 aa24.26■■□□□ 1.47
AC004540.1-201ENST00000439120 TPTE2Q6XPS3 522 aa24.26■■□□□ 1.47
AC004540.1-201ENST00000439120 KIF6Q6ZMV9 814 aa24.26■■□□□ 1.47
AC004540.1-201ENST00000439120 RRP7AQ9Y3A4 280 aaKnown RBP24.26■■□□□ 1.47
AC004540.1-201ENST00000439120 FAM177BA6PVY3 158 aa24.25■■□□□ 1.47
AC004540.1-201ENST00000439120 MASTLQ96GX5 879 aa24.25■■□□□ 1.47
AC004540.1-201ENST00000439120 CACNA1SQ13698 1873 aa24.25■■□□□ 1.47
AC004540.1-201ENST00000439120 TNRC6CQ9HCJ0 1690 aaKnown RBP24.24■■□□□ 1.47
AC004540.1-201ENST00000439120 CCDC88AQ3V6T2 1871 aa24.24■■□□□ 1.47
AC004540.1-201ENST00000439120 SRGNP10124 158 aa24.24■■□□□ 1.47
AC004540.1-201ENST00000439120 MYL6BP14649 208 aa24.24■■□□□ 1.47
AC004540.1-201ENST00000439120 GTF2E1P29083 439 aaPredicted RBP24.24■■□□□ 1.47
AC004540.1-201ENST00000439120 TIAM2Q8IVF5 1701 aa24.24■■□□□ 1.47
AC004540.1-201ENST00000439120 NFKBIEO00221 500 aa24.23■■□□□ 1.47
AC004540.1-201ENST00000439120 TMPOP42166 694 aaKnown RBP24.23■■□□□ 1.47
AC004540.1-201ENST00000439120 HLFQ16534 295 aa24.23■■□□□ 1.47
AC004540.1-201ENST00000439120 PRPF40BQ6NWY9 871 aaKnown RBP24.22■■□□□ 1.47
AC004540.1-201ENST00000439120 CCDC146Q8IYE0 955 aa24.22■■□□□ 1.47
AC004540.1-201ENST00000439120 RRAGCQ9HB90 399 aa24.22■■□□□ 1.47
AC004540.1-201ENST00000439120 ERVV-1B6SEH8 477 aa24.21■■□□□ 1.47
AC004540.1-201ENST00000439120 SOGA3Q5TF21 947 aa24.21■■□□□ 1.47
AC004540.1-201ENST00000439120 ARFGEF2Q9Y6D5 1785 aa24.21■■□□□ 1.47
AC004540.1-201ENST00000439120 MAP3K15Q6ZN16 1313 aa24.2■■□□□ 1.46
AC004540.1-201ENST00000439120 NPR1P16066 1061 aa24.2■■□□□ 1.46
AC004540.1-201ENST00000439120 NEUROD2Q15784 382 aa24.2■■□□□ 1.46
AC004540.1-201ENST00000439120 RBM46Q8TBY0 533 aaKnown RBP24.2■■□□□ 1.46
AC004540.1-201ENST00000439120 CEP350Q5VT06 3117 aa24.2■■□□□ 1.46
AC004540.1-201ENST00000439120 FER1L6Q2WGJ9 1857 aa24.19■■□□□ 1.46
AC004540.1-201ENST00000439120 SLX4Q8IY92 1834 aa24.19■■□□□ 1.46
AC004540.1-201ENST00000439120 ERBB4Q15303 1308 aa24.19■■□□□ 1.46
AC004540.1-201ENST00000439120 PRELPP51888 382 aa24.19■■□□□ 1.46
AC004540.1-201ENST00000439120 NYXQ9GZU5 481 aa24.19■■□□□ 1.46
AC004540.1-201ENST00000439120 TAOK3Q9H2K8 898 aa24.19■■□□□ 1.46
AC004540.1-201ENST00000439120 BABAM1Q9NWV8 329 aa24.19■■□□□ 1.46
AC004540.1-201ENST00000439120 NUP98P52948 1817 aa24.19■■□□□ 1.46
AC004540.1-201ENST00000439120 TTLL7Q6ZT98 887 aa24.18■■□□□ 1.46
AC004540.1-201ENST00000439120 RUNDC1Q96C34 613 aa24.18■■□□□ 1.46
AC004540.1-201ENST00000439120 ZBTB3Q9H5J0 574 aa24.18■■□□□ 1.46
AC004540.1-201ENST00000439120 GLTPD2A6NH11 291 aa24.17■■□□□ 1.46
AC004540.1-201ENST00000439120 EIF2S2P20042 333 aaKnown RBP24.17■■□□□ 1.46
AC004540.1-201ENST00000439120 APLP1P51693 650 aa24.17■■□□□ 1.46
AC004540.1-201ENST00000439120 ERFEQ4G0M1 354 aa24.17■■□□□ 1.46
AC004540.1-201ENST00000439120 DPY19L2Q6NUT2 758 aa24.17■■□□□ 1.46
AC004540.1-201ENST00000439120 LTBP3Q9NS15 1303 aa24.15■■□□□ 1.46
AC004540.1-201ENST00000439120 DICER1Q9UPY3 1922 aaKnown RBP24.14■■□□□ 1.46
AC004540.1-201ENST00000439120 KLRG2A4D1S0 409 aaPredicted RBP24.14■■□□□ 1.45
AC004540.1-201ENST00000439120 VEGFAP15692 232 aaPredicted RBP24.14■■□□□ 1.45
AC004540.1-201ENST00000439120 GPTP24298 496 aa24.14■■□□□ 1.45
AC004540.1-201ENST00000439120 FSTL1Q12841 308 aa24.14■■□□□ 1.45
AC004540.1-201ENST00000439120 CCDC93Q567U6 631 aa24.14■■□□□ 1.45
AC004540.1-201ENST00000439120 LAS1LQ9Y4W2 734 aaKnown RBP24.14■■□□□ 1.45
AC004540.1-201ENST00000439120 ALDH1B1P30837 517 aa24.13■■□□□ 1.45
AC004540.1-201ENST00000439120 NUTM1Q86Y26 1132 aa24.13■■□□□ 1.45
AC004540.1-201ENST00000439120 PRKRIP1Q9H875 184 aaPredicted RBP24.13■■□□□ 1.45
AC004540.1-201ENST00000439120 ADAMTS8Q9UP79 889 aa24.12■■□□□ 1.45
AC004540.1-201ENST00000439120 GIGYF2Q6Y7W6 1299 aaKnown RBP24.11■■□□□ 1.45
AC004540.1-201ENST00000439120 SMC1BQ8NDV3 1235 aa24.11■■□□□ 1.45
AC004540.1-201ENST00000439120 IBTKQ9P2D0 1353 aaPredicted RBP24.11■■□□□ 1.45
AC004540.1-201ENST00000439120 NECTIN2Q92692 538 aa24.1■■□□□ 1.45
AC004540.1-201ENST00000439120 RPGRQ92834 1020 aaKnown RBP24.1■■□□□ 1.45
AC004540.1-201ENST00000439120 ABCC12Q96J65 1359 aa24.1■■□□□ 1.45
AC004540.1-201ENST00000439120 PPP1R42Q7Z4L9 355 aa24.09■■□□□ 1.45
AC004540.1-201ENST00000439120 UBN2Q6ZU65 1347 aa24.09■■□□□ 1.45
AC004540.1-201ENST00000439120 SUSD4Q5VX71 490 aa24.08■■□□□ 1.45
AC004540.1-201ENST00000439120 ZNF34Q8IZ26 560 aa24.08■■□□□ 1.45
AC004540.1-201ENST00000439120 RTKN2Q8IZC4 609 aa24.08■■□□□ 1.45
AC004540.1-201ENST00000439120 C7orf43Q8WVR3 580 aa24.08■■□□□ 1.45
AC004540.1-201ENST00000439120 TRIM35Q9UPQ4 493 aa24.08■■□□□ 1.45
AC004540.1-201ENST00000439120 WDR90Q96KV7 1748 aa24.07■■□□□ 1.44
AC004540.1-201ENST00000439120 CHL1O00533 1208 aa24.07■■□□□ 1.44
AC004540.1-201ENST00000439120 ANXA1P04083 346 aa24.07■■□□□ 1.44
AC004540.1-201ENST00000439120 FKBP4Q02790 459 aaKnown RBP eCLIP24.07■■□□□ 1.44
AC004540.1-201ENST00000439120 PDIA6Q15084 440 aa24.07■■□□□ 1.44
AC004540.1-201ENST00000439120 PROSER3Q2NL68 480 aa24.07■■□□□ 1.44
AC004540.1-201ENST00000439120 PARP10Q53GL7 1025 aa24.07■■□□□ 1.44
AC004540.1-201ENST00000439120 AIMP1Q12904 312 aaKnown RBP24.06■■□□□ 1.44
AC004540.1-201ENST00000439120 CRY2Q49AN0 593 aa24.06■■□□□ 1.44
AC004540.1-201ENST00000439120 RIC1Q4ADV7 1423 aa24.06■■□□□ 1.44
AC004540.1-201ENST00000439120 LRP10Q7Z4F1 713 aa24.05■■□□□ 1.44
AC004540.1-201ENST00000439120 NTSR2O95665 410 aa24.04■■□□□ 1.44
AC004540.1-201ENST00000439120 HSP90AB3PQ58FF7 597 aa24.04■■□□□ 1.44
AC004540.1-201ENST00000439120 OLFM4Q6UX06 510 aa24.04■■□□□ 1.44
AC004540.1-201ENST00000439120 COPS6Q7L5N1 327 aa24.04■■□□□ 1.44
AC004540.1-201ENST00000439120 XAGE3Q8WTP9 111 aa24.04■■□□□ 1.44
AC004540.1-201ENST00000439120 ZNF277Q9NRM2 450 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms