RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 POGZQ7Z3K3 1410 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 CCDC196A0A1B0GTZ2 297 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 ST5P78524 1137 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 PICALMQ13492 652 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 TMEM67Q5HYA8 995 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 NME9Q86XW9 330 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 CALML4Q96GE6 196 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 IQSEC3Q9UPP2 1182 aaPredicted RBP15.92■□□□□ 0.14
LRCH3-206ENST00000438796 FGFR1OPO95684 399 aaKnown RBP15.92■□□□□ 0.14
LRCH3-206ENST00000438796 IL27Q8NEV9 243 aa15.92■□□□□ 0.14
LRCH3-206ENST00000438796 HLTFQ14527 1009 aaKnown RBP eCLIP15.92■□□□□ 0.14
LRCH3-206ENST00000438796 UBXN4Q92575 508 aa15.92■□□□□ 0.14
LRCH3-206ENST00000438796 SYNCQ9H7C4 482 aa15.92■□□□□ 0.14
LRCH3-206ENST00000438796 GLRX3O76003 335 aaKnown RBP15.92■□□□□ 0.14
LRCH3-206ENST00000438796 FAM212AQ96EL1 285 aa15.92■□□□□ 0.14
LRCH3-206ENST00000438796 RAB11FIP3O75154 756 aa15.91■□□□□ 0.14
LRCH3-206ENST00000438796 CHRNA2Q15822 529 aa15.91■□□□□ 0.14
LRCH3-206ENST00000438796 RNF187Q5TA31 235 aaPredicted RBP15.91■□□□□ 0.14
LRCH3-206ENST00000438796 TSHZ3Q63HK5 1081 aa15.91■□□□□ 0.14
LRCH3-206ENST00000438796 CEBPAP49715 358 aaPredicted RBP15.91■□□□□ 0.14
LRCH3-206ENST00000438796 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.91■□□□□ 0.14
LRCH3-206ENST00000438796 FCHSD2O94868 740 aa15.91■□□□□ 0.14
LRCH3-206ENST00000438796 SKAP1Q86WV1 359 aa15.91■□□□□ 0.14
LRCH3-206ENST00000438796 OTUD6BQ8N6M0 293 aa15.91■□□□□ 0.14
LRCH3-206ENST00000438796 MICU3Q86XE3 530 aa15.9■□□□□ 0.14
LRCH3-206ENST00000438796 IGF1RP08069 1367 aa15.9■□□□□ 0.14
LRCH3-206ENST00000438796 HLA-DOAP06340 250 aa15.9■□□□□ 0.14
LRCH3-206ENST00000438796 NAIPQ13075 1403 aa15.9■□□□□ 0.14
LRCH3-206ENST00000438796 SSX2IPQ9Y2D8 614 aa15.9■□□□□ 0.14
LRCH3-206ENST00000438796 SLC26A6Q9BXS9 759 aa15.9■□□□□ 0.14
LRCH3-206ENST00000438796 TFIP11Q9UBB9 837 aaKnown RBP15.89■□□□□ 0.14
LRCH3-206ENST00000438796 POLR3GO15318 223 aaPredicted RBP15.89■□□□□ 0.13
LRCH3-206ENST00000438796 SFPQP23246 707 aaKnown RBP eCLIP15.89■□□□□ 0.13
LRCH3-206ENST00000438796 SPECC1Q5M775 1068 aa15.89■□□□□ 0.13
LRCH3-206ENST00000438796 LDHAL6AQ6ZMR3 332 aa15.89■□□□□ 0.13
LRCH3-206ENST00000438796 SLC52A1Q9NWF4 448 aa15.89■□□□□ 0.13
LRCH3-206ENST00000438796 GCOM1H8Y6P7 765 aaPredicted RBP15.89■□□□□ 0.13
LRCH3-206ENST00000438796 MYZAPP0CAP1 466 aa15.89■□□□□ 0.13
LRCH3-206ENST00000438796 PTPN14Q15678 1187 aa15.89■□□□□ 0.13
LRCH3-206ENST00000438796 AKNAD1Q5T1N1 836 aa15.89■□□□□ 0.13
LRCH3-206ENST00000438796 ANO10Q9NW15 660 aa15.89■□□□□ 0.13
LRCH3-206ENST00000438796 FSIP1Q8NA03 581 aa15.89■□□□□ 0.13
LRCH3-206ENST00000438796 GDPD2Q9HCC8 539 aa15.88■□□□□ 0.13
LRCH3-206ENST00000438796 CLIP2Q9UDT6 1046 aa15.88■□□□□ 0.13
LRCH3-206ENST00000438796 NBPF6Q5VWK0 638 aa15.88■□□□□ 0.13
LRCH3-206ENST00000438796 NBPF5PQ86XG9 351 aaPredicted RBP15.88■□□□□ 0.13
LRCH3-206ENST00000438796 NBPF4Q96M43 638 aa15.88■□□□□ 0.13
LRCH3-206ENST00000438796 KRT28Q7Z3Y7 464 aa15.88■□□□□ 0.13
LRCH3-206ENST00000438796 CCDC61Q9Y6R9 512 aa15.88■□□□□ 0.13
LRCH3-206ENST00000438796 GJC1P36383 396 aa15.88■□□□□ 0.13
LRCH3-206ENST00000438796 CETN1Q12798 172 aa15.88■□□□□ 0.13
LRCH3-206ENST00000438796 GIMAP7Q8NHV1 300 aa15.88■□□□□ 0.13
LRCH3-206ENST00000438796 ZBTB9Q96C00 473 aa15.88■□□□□ 0.13
LRCH3-206ENST00000438796 RNF41Q9H4P4 317 aaPredicted RBP15.88■□□□□ 0.13
LRCH3-206ENST00000438796 USO1O60763 962 aaKnown RBP15.88■□□□□ 0.13
LRCH3-206ENST00000438796 PHAXQ9H814 394 aaKnown RBP15.88■□□□□ 0.13
LRCH3-206ENST00000438796 STX8Q9UNK0 236 aa15.88■□□□□ 0.13
LRCH3-206ENST00000438796 TCP11L1Q9NUJ3 509 aa15.87■□□□□ 0.13
LRCH3-206ENST00000438796 BAG3O95817 575 aa15.87■□□□□ 0.13
LRCH3-206ENST00000438796 VEZTQ9HBM0 779 aa15.87■□□□□ 0.13
LRCH3-206ENST00000438796 SHTN1A0MZ66 631 aa15.87■□□□□ 0.13
LRCH3-206ENST00000438796 NBPF8Q3BBV2 869 aa15.87■□□□□ 0.13
LRCH3-206ENST00000438796 CDC5LQ99459 802 aaKnown RBP15.87■□□□□ 0.13
LRCH3-206ENST00000438796 PRDM10Q9NQV6 1147 aa15.87■□□□□ 0.13
LRCH3-206ENST00000438796 TMEM110-MUSTN1A8MSY1 372 aa15.87■□□□□ 0.13
LRCH3-206ENST00000438796 PDE4BQ07343 736 aa15.87■□□□□ 0.13
LRCH3-206ENST00000438796 RPAP2Q8IXW5 612 aaPredicted RBP15.87■□□□□ 0.13
LRCH3-206ENST00000438796 ZFP91Q96JP5 570 aaPredicted RBP15.87■□□□□ 0.13
LRCH3-206ENST00000438796 MFSD6Q6ZSS7 791 aa15.87■□□□□ 0.13
LRCH3-206ENST00000438796 TSPY3P0CV98 308 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 TSPY8P0CW00 308 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 HSP90AA4PQ58FG1 418 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 TSNARE1Q96NA8 513 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 PHACTR2O75167 634 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 DNAAF4Q8WXU2 420 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 ATAD2Q6PL18 1390 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 CCDC174Q6PII3 467 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 TMC6Q7Z403 805 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 PAIP2Q9BPZ3 127 aaKnown RBP15.86■□□□□ 0.13
LRCH3-206ENST00000438796 CWC25Q9NXE8 425 aaPredicted RBP15.86■□□□□ 0.13
LRCH3-206ENST00000438796 C8orf37Q96NL8 207 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 MPHOSPH6Q99547 160 aaKnown RBP15.86■□□□□ 0.13
LRCH3-206ENST00000438796 EMILIN1Q9Y6C2 1016 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 YEATS4O95619 227 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 PAFAH1B1P43034 410 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 USP16Q9Y5T5 823 aa15.86■□□□□ 0.13
LRCH3-206ENST00000438796 APBB1IPQ7Z5R6 666 aaPredicted RBP15.85■□□□□ 0.13
LRCH3-206ENST00000438796 DDX23Q9BUQ8 820 aaKnown RBP15.85■□□□□ 0.13
LRCH3-206ENST00000438796 HYPKQ9NX55 129 aa15.85■□□□□ 0.13
LRCH3-206ENST00000438796 ZBTB21Q9ULJ3 1066 aa15.85■□□□□ 0.13
LRCH3-206ENST00000438796 ANXA1P04083 346 aa15.85■□□□□ 0.13
LRCH3-206ENST00000438796 AMOTQ4VCS5 1084 aa15.85■□□□□ 0.13
LRCH3-206ENST00000438796 ZSCAN12O43309 604 aa15.85■□□□□ 0.13
LRCH3-206ENST00000438796 HEATR3Q7Z4Q2 680 aa15.85■□□□□ 0.13
LRCH3-206ENST00000438796 AMOTL2Q9Y2J4 779 aa15.85■□□□□ 0.13
LRCH3-206ENST00000438796 PPP1R14CQ8TAE6 165 aa15.85■□□□□ 0.13
LRCH3-206ENST00000438796 FERP16591 822 aa15.85■□□□□ 0.13
LRCH3-206ENST00000438796 UTP14AQ9BVJ6 771 aaKnown RBP15.85■□□□□ 0.13
LRCH3-206ENST00000438796 SRRTQ9BXP5 876 aaKnown RBP15.85■□□□□ 0.13
LRCH3-206ENST00000438796 CALM1P0DP23 149 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms