RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 CCDC27Q2M243 656 aa32.17■■■□□ 2.74
RAPGEF1-206ENST00000438647 CNBD1Q8NA66 436 aa32.17■■■□□ 2.74
RAPGEF1-206ENST00000438647 MBIPQ9NS73 344 aa32.17■■■□□ 2.74
RAPGEF1-206ENST00000438647 NCBP3Q53F19 620 aaKnown RBP32.16■■■□□ 2.74
RAPGEF1-206ENST00000438647 MAP3K15Q6ZN16 1313 aa32.16■■■□□ 2.74
RAPGEF1-206ENST00000438647 CHRNA5P30532 468 aa32.15■■■□□ 2.74
RAPGEF1-206ENST00000438647 PRR5LQ6MZQ0 368 aa32.15■■■□□ 2.74
RAPGEF1-206ENST00000438647 PDZRN3Q9UPQ7 1066 aa32.15■■■□□ 2.74
RAPGEF1-206ENST00000438647 NIP7Q9Y221 180 aaKnown RBP eCLIP32.15■■■□□ 2.74
RAPGEF1-206ENST00000438647 ST5P78524 1137 aa32.14■■■□□ 2.74
RAPGEF1-206ENST00000438647 KRT24Q2M2I5 525 aa32.14■■■□□ 2.74
RAPGEF1-206ENST00000438647 DALRD3Q5D0E6 543 aaKnown RBP32.14■■■□□ 2.74
RAPGEF1-206ENST00000438647 BRIP1Q9BX63 1249 aa32.14■■■□□ 2.74
RAPGEF1-206ENST00000438647 BRCA1P38398 1863 aaKnown RBP32.13■■■□□ 2.73
RAPGEF1-206ENST00000438647 TTLL7Q6ZT98 887 aa32.13■■■□□ 2.73
RAPGEF1-206ENST00000438647 NBPF5PQ86XG9 351 aaPredicted RBP32.13■■■□□ 2.73
RAPGEF1-206ENST00000438647 PDE6BP35913 854 aa32.12■■■□□ 2.73
RAPGEF1-206ENST00000438647 PDIA6Q15084 440 aa32.12■■■□□ 2.73
RAPGEF1-206ENST00000438647 HLFQ16534 295 aa32.12■■■□□ 2.73
RAPGEF1-206ENST00000438647 H0YIN7 160 aa32.11■■■□□ 2.73
RAPGEF1-206ENST00000438647 HDGFL1Q5TGJ6 251 aa32.11■■■□□ 2.73
RAPGEF1-206ENST00000438647 NECTIN2Q92692 538 aa32.11■■■□□ 2.73
RAPGEF1-206ENST00000438647 LRP10Q7Z4F1 713 aa32.1■■■□□ 2.73
RAPGEF1-206ENST00000438647 C2CD5Q86YS7 1000 aa32.1■■■□□ 2.73
RAPGEF1-206ENST00000438647 DDX21Q9NR30 783 aaKnown RBP eCLIP32.1■■■□□ 2.73
RAPGEF1-206ENST00000438647 DUSP27Q5VZP5 1158 aa32.09■■■□□ 2.73
RAPGEF1-206ENST00000438647 TPTE2Q6XPS3 522 aa32.09■■■□□ 2.73
RAPGEF1-206ENST00000438647 WWC1Q8IX03 1113 aa32.09■■■□□ 2.73
RAPGEF1-206ENST00000438647 ZBTB3Q9H5J0 574 aa32.09■■■□□ 2.73
RAPGEF1-206ENST00000438647 PROSER3Q2NL68 480 aa32.08■■■□□ 2.73
RAPGEF1-206ENST00000438647 FAM9BQ8IZU0 186 aa32.08■■■□□ 2.73
RAPGEF1-206ENST00000438647 ATP10DQ9P241 1426 aa32.08■■■□□ 2.73
RAPGEF1-206ENST00000438647 ANXA1P04083 346 aa32.06■■■□□ 2.72
RAPGEF1-206ENST00000438647 GIGYF2Q6Y7W6 1299 aaKnown RBP32.06■■■□□ 2.72
RAPGEF1-206ENST00000438647 CCDC24Q8N4L8 307 aa32.06■■■□□ 2.72
RAPGEF1-206ENST00000438647 CHMP4AQ9BY43 222 aa32.05■■■□□ 2.72
RAPGEF1-206ENST00000438647 NYXQ9GZU5 481 aa32.05■■■□□ 2.72
RAPGEF1-206ENST00000438647 CHPF2Q9P2E5 772 aa32.05■■■□□ 2.72
RAPGEF1-206ENST00000438647 DBF4Q9UBU7 674 aaPredicted RBP32.05■■■□□ 2.72
RAPGEF1-206ENST00000438647 ARFGEF1Q9Y6D6 1849 aa32.05■■■□□ 2.72
RAPGEF1-206ENST00000438647 SENP3-EIF4A1A0A087X0R7 540 aa32.04■■■□□ 2.72
RAPGEF1-206ENST00000438647 TTLL6Q8N841 843 aa32.04■■■□□ 2.72
RAPGEF1-206ENST00000438647 ZNF784Q8NCA9 323 aaPredicted RBP32.04■■■□□ 2.72
RAPGEF1-206ENST00000438647 NUP98P52948 1817 aa32.04■■■□□ 2.72
RAPGEF1-206ENST00000438647 IL16Q14005 1332 aa32.03■■■□□ 2.72
RAPGEF1-206ENST00000438647 GTF2E1P29083 439 aaPredicted RBP32.03■■■□□ 2.72
RAPGEF1-206ENST00000438647 ARHGAP27Q6ZUM4 889 aa32.03■■■□□ 2.72
RAPGEF1-206ENST00000438647 COPS6Q7L5N1 327 aa32.03■■■□□ 2.72
RAPGEF1-206ENST00000438647 DLEC1Q9Y238 1755 aa32.03■■■□□ 2.72
RAPGEF1-206ENST00000438647 ANKRD31Q8N7Z5 1873 aa32.03■■■□□ 2.72
RAPGEF1-206ENST00000438647 XAGE3Q8WTP9 111 aa32.02■■■□□ 2.72
RAPGEF1-206ENST00000438647 FAM177BA6PVY3 158 aa32.01■■■□□ 2.71
RAPGEF1-206ENST00000438647 AIMP1Q12904 312 aaKnown RBP32.01■■■□□ 2.71
RAPGEF1-206ENST00000438647 IBTKQ9P2D0 1353 aaPredicted RBP32■■■□□ 2.71
RAPGEF1-206ENST00000438647 HSP90AB3PQ58FF7 597 aa32■■■□□ 2.71
RAPGEF1-206ENST00000438647 ZNF622Q969S3 477 aaKnown RBP eCLIP32■■■□□ 2.71
RAPGEF1-206ENST00000438647 HYPKQ9NX55 129 aa32■■■□□ 2.71
RAPGEF1-206ENST00000438647 GPTP24298 496 aa31.99■■■□□ 2.71
RAPGEF1-206ENST00000438647 ZNF34Q8IZ26 560 aa31.99■■■□□ 2.71
RAPGEF1-206ENST00000438647 ELL2O00472 640 aaPredicted RBP31.98■■■□□ 2.71
RAPGEF1-206ENST00000438647 PARP10Q53GL7 1025 aa31.98■■■□□ 2.71
RAPGEF1-206ENST00000438647 WDR63Q8IWG1 891 aa31.98■■■□□ 2.71
RAPGEF1-206ENST00000438647 C8orf58Q8NAV2 365 aa31.97■■■□□ 2.71
RAPGEF1-206ENST00000438647 TSR2Q969E8 191 aaKnown RBP31.97■■■□□ 2.71
RAPGEF1-206ENST00000438647 SALL2Q9Y467 1007 aaPredicted RBP31.97■■■□□ 2.71
RAPGEF1-206ENST00000438647 UBN2Q6ZU65 1347 aa31.97■■■□□ 2.71
RAPGEF1-206ENST00000438647 SRGNP10124 158 aa31.96■■■□□ 2.71
RAPGEF1-206ENST00000438647 STYK1Q6J9G0 422 aa31.96■■■□□ 2.71
RAPGEF1-206ENST00000438647 PPP1R42Q7Z4L9 355 aa31.96■■■□□ 2.71
RAPGEF1-206ENST00000438647 CNKSR1Q969H4 720 aa31.96■■■□□ 2.71
RAPGEF1-206ENST00000438647 MASTLQ96GX5 879 aa31.96■■■□□ 2.71
RAPGEF1-206ENST00000438647 COL11A2P13942 1736 aaPredicted RBP31.95■■■□□ 2.7
RAPGEF1-206ENST00000438647 KLRG2A4D1S0 409 aaPredicted RBP31.94■■■□□ 2.7
RAPGEF1-206ENST00000438647 CCDC30Q5VVM6 783 aa31.93■■■□□ 2.7
RAPGEF1-206ENST00000438647 ADCY9O60503 1353 aa31.93■■■□□ 2.7
RAPGEF1-206ENST00000438647 NPR1P16066 1061 aa31.92■■■□□ 2.7
RAPGEF1-206ENST00000438647 SUSD4Q5VX71 490 aa31.92■■■□□ 2.7
RAPGEF1-206ENST00000438647 ANKRD13DQ6ZTN6 518 aa31.92■■■□□ 2.7
RAPGEF1-206ENST00000438647 NUTM1Q86Y26 1132 aa31.92■■■□□ 2.7
RAPGEF1-206ENST00000438647 PLBD2Q8NHP8 589 aa31.92■■■□□ 2.7
RAPGEF1-206ENST00000438647 TCIRG1Q13488 830 aa31.91■■■□□ 2.7
RAPGEF1-206ENST00000438647 NTSR2O95665 410 aa31.9■■■□□ 2.7
RAPGEF1-206ENST00000438647 ERFEQ4G0M1 354 aa31.9■■■□□ 2.7
RAPGEF1-206ENST00000438647 RIC1Q4ADV7 1423 aa31.9■■■□□ 2.7
RAPGEF1-206ENST00000438647 CCER2I3L3R5 266 aa31.89■■■□□ 2.7
RAPGEF1-206ENST00000438647 TSPYL6Q8N831 410 aa31.89■■■□□ 2.7
RAPGEF1-206ENST00000438647 UTP14AQ9BVJ6 771 aaKnown RBP31.89■■■□□ 2.7
RAPGEF1-206ENST00000438647 RNF123Q5XPI4 1314 aa31.89■■■□□ 2.7
RAPGEF1-206ENST00000438647 ABCC12Q96J65 1359 aa31.89■■■□□ 2.7
RAPGEF1-206ENST00000438647 ANKRD36CQ5JPF3 1778 aa31.87■■■□□ 2.69
RAPGEF1-206ENST00000438647 FANCIQ9NVI1 1328 aa31.87■■■□□ 2.69
RAPGEF1-206ENST00000438647 GOLGA2Q08379 1002 aa31.87■■■□□ 2.69
RAPGEF1-206ENST00000438647 TWISTNBQ3B726 338 aaPredicted RBP31.87■■■□□ 2.69
RAPGEF1-206ENST00000438647 PRPF40BQ6NWY9 871 aaKnown RBP31.87■■■□□ 2.69
RAPGEF1-206ENST00000438647 SOGA3Q5TF21 947 aa31.86■■■□□ 2.69
RAPGEF1-206ENST00000438647 NLRP10Q86W26 655 aa31.86■■■□□ 2.69
RAPGEF1-206ENST00000438647 STK31Q9BXU1 1019 aa31.86■■■□□ 2.69
RAPGEF1-206ENST00000438647 CRY2Q49AN0 593 aa31.85■■■□□ 2.69
RAPGEF1-206ENST00000438647 C9orf131Q5VYM1 1079 aa31.85■■■□□ 2.69
RAPGEF1-206ENST00000438647 C21orf2O43822 256 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms