RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 LINS1Q8NG48 757 aa22.59■■□□□ 1.21
CLK1-205ENST00000434813 RAD50Q92878 1312 aa22.59■■□□□ 1.21
CLK1-205ENST00000434813 MRC1P22897 1456 aa22.59■■□□□ 1.21
CLK1-205ENST00000434813 HSPA4P34932 840 aa22.58■■□□□ 1.21
CLK1-205ENST00000434813 MEGF6O75095 1541 aa22.58■■□□□ 1.21
CLK1-205ENST00000434813 SGSM2O43147 1006 aa22.58■■□□□ 1.2
CLK1-205ENST00000434813 DDX58O95786 925 aaKnown RBP22.58■■□□□ 1.2
CLK1-205ENST00000434813 GLRX3O76003 335 aaKnown RBP22.57■■□□□ 1.2
CLK1-205ENST00000434813 OS9Q13438 667 aaPredicted RBP22.57■■□□□ 1.2
CLK1-205ENST00000434813 MCTP1Q6DN14 999 aa22.57■■□□□ 1.2
CLK1-205ENST00000434813 ERC1Q8IUD2 1116 aa22.57■■□□□ 1.2
CLK1-205ENST00000434813 PRDM11Q9NQV5 511 aa22.57■■□□□ 1.2
CLK1-205ENST00000434813 ZDHHC9Q9Y397 364 aa22.57■■□□□ 1.2
CLK1-205ENST00000434813 DDX49Q9Y6V7 483 aaKnown RBP22.57■■□□□ 1.2
CLK1-205ENST00000434813 PDIA6Q15084 440 aa22.57■■□□□ 1.2
CLK1-205ENST00000434813 CWF19L2Q2TBE0 894 aaKnown RBP22.57■■□□□ 1.2
CLK1-205ENST00000434813 INTS4Q96HW7 963 aaKnown RBP22.57■■□□□ 1.2
CLK1-205ENST00000434813 SLC52A2Q9HAB3 445 aa22.57■■□□□ 1.2
CLK1-205ENST00000434813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.57■■□□□ 1.25e-10■■□□□ 13.8
CLK1-205ENST00000434813 MAP4K4O95819 1239 aaPredicted RBP22.56■■□□□ 1.2
CLK1-205ENST00000434813 TATP17735 454 aaPredicted RBP22.56■■□□□ 1.2
CLK1-205ENST00000434813 PIP4K2BP78356 416 aa22.56■■□□□ 1.2
CLK1-205ENST00000434813 ZNF790Q6PG37 636 aa22.56■■□□□ 1.2
CLK1-205ENST00000434813 CLASRPQ8N2M8 674 aaKnown RBP22.56■■□□□ 1.2
CLK1-205ENST00000434813 PKD1L3Q7Z443 1732 aa22.56■■□□□ 1.2
CLK1-205ENST00000434813 GRM8O00222 908 aa22.55■■□□□ 1.2
CLK1-205ENST00000434813 GAS2L3Q86XJ1 694 aa22.55■■□□□ 1.2
CLK1-205ENST00000434813 LMBRD1Q9NUN5 540 aa22.55■■□□□ 1.2
CLK1-205ENST00000434813 PHKG2P15735 406 aa22.55■■□□□ 1.2
CLK1-205ENST00000434813 SPG7Q9UQ90 795 aa22.54■■□□□ 1.2
CLK1-205ENST00000434813 GPATCH3Q96I76 525 aa22.53■■□□□ 1.2
CLK1-205ENST00000434813 LSG1Q9H089 658 aaKnown RBP22.53■■□□□ 1.2
CLK1-205ENST00000434813 ECHDC1Q9NTX5 307 aa22.53■■□□□ 1.2
CLK1-205ENST00000434813 KAZALD1Q96I82 304 aa22.52■■□□□ 1.2
CLK1-205ENST00000434813 SUCLG2Q96I99 432 aa22.52■■□□□ 1.2
CLK1-205ENST00000434813 NHSL1Q5SYE7 1610 aa22.52■■□□□ 1.2
CLK1-205ENST00000434813 UPF3BQ9BZI7 483 aaKnown RBP22.52■■□□□ 1.19
CLK1-205ENST00000434813 PARP4Q9UKK3 1724 aaKnown RBP22.51■■□□□ 1.19
CLK1-205ENST00000434813 BRD1O95696 1058 aa22.5■■□□□ 1.19
CLK1-205ENST00000434813 SLC39A6Q13433 755 aa22.5■■□□□ 1.19
CLK1-205ENST00000434813 IFNL2Q8IZJ0 200 aa22.5■■□□□ 1.19
CLK1-205ENST00000434813 PA2G4Q9UQ80 394 aaKnown RBP22.5■■□□□ 1.19
CLK1-205ENST00000434813 LARP1Q6PKG0 1096 aaKnown RBP22.5■■□□□ 1.19
CLK1-205ENST00000434813 BICC1Q9H694 974 aaKnown RBP22.5■■□□□ 1.19
CLK1-205ENST00000434813 IGKV5-2P06315 115 aa22.49■■□□□ 1.19
CLK1-205ENST00000434813 IFIT2P09913 472 aaKnown RBP22.49■■□□□ 1.19
CLK1-205ENST00000434813 AIMP1Q12904 312 aaKnown RBP22.49■■□□□ 1.19
CLK1-205ENST00000434813 SNX14Q9Y5W7 946 aa22.49■■□□□ 1.19
CLK1-205ENST00000434813 ZNF445P59923 1031 aa22.48■■□□□ 1.19
CLK1-205ENST00000434813 CWC27Q6UX04 472 aaKnown RBP22.48■■□□□ 1.19
CLK1-205ENST00000434813 KIAA1211Q6ZU35 1233 aa22.48■■□□□ 1.19
CLK1-205ENST00000434813 RIC3Q7Z5B4 369 aa22.48■■□□□ 1.19
CLK1-205ENST00000434813 NFATC2IPQ8NCF5 419 aa22.48■■□□□ 1.19
CLK1-205ENST00000434813 RUFY2Q8WXA3 655 aa22.48■■□□□ 1.19
CLK1-205ENST00000434813 DIAPH3Q9NSV4 1193 aa22.48■■□□□ 1.19
CLK1-205ENST00000434813 GLI3P10071 1580 aa22.47■■□□□ 1.19
CLK1-205ENST00000434813 WDR17Q8IZU2 1322 aa22.47■■□□□ 1.19
CLK1-205ENST00000434813 NEXNQ0ZGT2 675 aa22.47■■□□□ 1.19
CLK1-205ENST00000434813 DCAF5Q96JK2 942 aa22.47■■□□□ 1.19
CLK1-205ENST00000434813 LAMB4A4D0S4 1761 aa22.47■■□□□ 1.19
CLK1-205ENST00000434813 TOM1L2Q6ZVM7 507 aa22.47■■□□□ 1.19
CLK1-205ENST00000434813 NOL8Q76FK4 1167 aaKnown RBP22.47■■□□□ 1.19
CLK1-205ENST00000434813 AACSQ86V21 672 aa22.47■■□□□ 1.19
CLK1-205ENST00000434813 ZNF496Q96IT1 587 aaPredicted RBP22.47■■□□□ 1.19
CLK1-205ENST00000434813 NEURL1BA8MQ27 555 aa22.46■■□□□ 1.19
CLK1-205ENST00000434813 TTC14Q96N46 770 aa22.46■■□□□ 1.19
CLK1-205ENST00000434813 RRAGDQ9NQL2 400 aaPredicted RBP22.46■■□□□ 1.19
CLK1-205ENST00000434813 PRPF40AO75400 957 aaKnown RBP22.45■■□□□ 1.18
CLK1-205ENST00000434813 SASH1O94885 1247 aa22.45■■□□□ 1.18
CLK1-205ENST00000434813 XAGE3Q8WTP9 111 aa22.45■■□□□ 1.18
CLK1-205ENST00000434813 EVI5LQ96CN4 794 aa22.45■■□□□ 1.18
CLK1-205ENST00000434813 METTL22Q9BUU2 404 aaPredicted RBP22.45■■□□□ 1.18
CLK1-205ENST00000434813 G3BP1Q13283 466 aaKnown RBP eCLIP22.45■■□□□ 1.18
CLK1-205ENST00000434813 CAVIN1Q6NZI2 390 aaKnown RBP22.45■■□□□ 1.18
CLK1-205ENST00000434813 LRP10Q7Z4F1 713 aa22.45■■□□□ 1.18
CLK1-205ENST00000434813 FBXO41Q8TF61 875 aa22.45■■□□□ 1.18
CLK1-205ENST00000434813 ABCA3Q99758 1704 aa22.44■■□□□ 1.18
CLK1-205ENST00000434813 CYP27B1O15528 508 aa22.44■■□□□ 1.18
CLK1-205ENST00000434813 SNRPA1P09661 255 aaKnown RBP22.44■■□□□ 1.18
CLK1-205ENST00000434813 MYL6BP14649 208 aa22.44■■□□□ 1.18
CLK1-205ENST00000434813 GCKRQ14397 625 aa22.44■■□□□ 1.18
CLK1-205ENST00000434813 ZSCAN23Q3MJ62 389 aa22.44■■□□□ 1.18
CLK1-205ENST00000434813 COL5A2P05997 1499 aaPredicted RBP22.43■■□□□ 1.18
CLK1-205ENST00000434813 RASEFQ8IZ41 740 aa22.43■■□□□ 1.18
CLK1-205ENST00000434813 TTC5Q8N0Z6 440 aa22.43■■□□□ 1.18
CLK1-205ENST00000434813 GPT2Q8TD30 523 aa22.43■■□□□ 1.18
CLK1-205ENST00000434813 ARFGEF2Q9Y6D5 1785 aa22.43■■□□□ 1.18
CLK1-205ENST00000434813 COPS6Q7L5N1 327 aa22.43■■□□□ 1.18
CLK1-205ENST00000434813 EVA1CP58658 441 aa22.42■■□□□ 1.18
CLK1-205ENST00000434813 EAF2Q96CJ1 260 aaPredicted RBP22.42■■□□□ 1.18
CLK1-205ENST00000434813 COL15A1P39059 1388 aa22.42■■□□□ 1.18
CLK1-205ENST00000434813 AFDNP55196 1824 aaKnown RBP22.42■■□□□ 1.18
CLK1-205ENST00000434813 FMNL2Q96PY5 1086 aa22.41■■□□□ 1.18
CLK1-205ENST00000434813 MYD88Q99836 296 aa22.41■■□□□ 1.18
CLK1-205ENST00000434813 ROBO1Q9Y6N7 1651 aa22.41■■□□□ 1.18
CLK1-205ENST00000434813 HIP1O00291 1037 aa22.41■■□□□ 1.18
CLK1-205ENST00000434813 NCLP19338 710 aaKnown RBP22.41■■□□□ 1.18
CLK1-205ENST00000434813 KCNB2Q92953 911 aa22.41■■□□□ 1.18
CLK1-205ENST00000434813 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.41■■□□□ 1.18
CLK1-205ENST00000434813 MBD3O95983 291 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms