RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 SLC16A10Q8TF71 515 aa7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 ARHGEF1Q92888 912 aaKnown RBP7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 FMNL2Q96PY5 1086 aa7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 TRIM35Q9UPQ4 493 aa7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 SALL2Q9Y467 1007 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 USP16Q9Y5T5 823 aa7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 MYH14Q7Z406 1995 aaKnown RBP7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 COL5A3P25940 1745 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 TJP1Q07157 1748 aa7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 QSER1Q2KHR3 1735 aa7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 CEMIPQ8WUJ3 1361 aa7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 A1BGP04217 495 aa7.57□□□□□ -1.2
HMGB3P24-201ENST00000433260 CYP19A1P11511 503 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P24-201ENST00000433260 SSFA2P28290 1259 aa7.57□□□□□ -1.2
HMGB3P24-201ENST00000433260 PNISRQ8TF01 805 aaKnown RBP7.57□□□□□ -1.2
HMGB3P24-201ENST00000433260 CCDC87Q9NVE4 849 aa7.57□□□□□ -1.2
HMGB3P24-201ENST00000433260 HEG1Q9ULI3 1381 aa7.57□□□□□ -1.2
HMGB3P24-201ENST00000433260 KCPQ6ZWJ8 1503 aa7.57□□□□□ -1.2
HMGB3P24-201ENST00000433260 LRP5O75197 1615 aa7.56□□□□□ -1.2
HMGB3P24-201ENST00000433260 MRC1P22897 1456 aa7.56□□□□□ -1.2
HMGB3P24-201ENST00000433260 STARD3NLO95772 234 aa7.56□□□□□ -1.2
HMGB3P24-201ENST00000433260 NGEFQ8N5V2 710 aa7.56□□□□□ -1.2
HMGB3P24-201ENST00000433260 TEX13AQ9BXU3 409 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P24-201ENST00000433260 FHDC1Q9C0D6 1143 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P24-201ENST00000433260 SRP68Q9UHB9 627 aaKnown RBP7.56□□□□□ -1.2
HMGB3P24-201ENST00000433260 ZBTB1Q9Y2K1 713 aa7.56□□□□□ -1.2
HMGB3P24-201ENST00000433260 ZNF831Q5JPB2 1677 aa7.56□□□□□ -1.2
HMGB3P24-201ENST00000433260 UBR2Q8IWV8 1755 aa7.56□□□□□ -1.2
HMGB3P24-201ENST00000433260 CNTNAP4Q9C0A0 1308 aa7.55□□□□□ -1.2
HMGB3P24-201ENST00000433260 ZPR1O75312 459 aa7.55□□□□□ -1.2
HMGB3P24-201ENST00000433260 SNRPA1P09661 255 aaKnown RBP7.55□□□□□ -1.2
HMGB3P24-201ENST00000433260 LMOD3Q0VAK6 560 aa7.55□□□□□ -1.2
HMGB3P24-201ENST00000433260 USPL1Q5W0Q7 1092 aa7.55□□□□□ -1.2
HMGB3P24-201ENST00000433260 NPM2Q86SE8 214 aaKnown RBP7.55□□□□□ -1.2
HMGB3P24-201ENST00000433260 FBXO22Q8NEZ5 403 aa7.55□□□□□ -1.2
HMGB3P24-201ENST00000433260 SYT17Q9BSW7 474 aa7.55□□□□□ -1.2
HMGB3P24-201ENST00000433260 TSPYL4Q9UJ04 414 aa7.55□□□□□ -1.2
HMGB3P24-201ENST00000433260 TBC1D2BQ9UPU7 963 aa7.55□□□□□ -1.2
HMGB3P24-201ENST00000433260 ATMINO43313 823 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P24-201ENST00000433260 EIF2S2P20042 333 aaKnown RBP7.54□□□□□ -1.2
HMGB3P24-201ENST00000433260 EIF4A1P60842 406 aaKnown RBP7.54□□□□□ -1.2
HMGB3P24-201ENST00000433260 ASTLQ6HA08 431 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P24-201ENST00000433260 BICDL1Q6ZP65 573 aa7.54□□□□□ -1.2
HMGB3P24-201ENST00000433260 NLGN1Q8N2Q7 840 aa7.54□□□□□ -1.2
HMGB3P24-201ENST00000433260 NECTIN2Q92692 538 aa7.54□□□□□ -1.2
HMGB3P24-201ENST00000433260 WWC3Q9ULE0 1092 aa7.54□□□□□ -1.2
HMGB3P24-201ENST00000433260 ELL2O00472 640 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P24-201ENST00000433260 GIGYF1O75420 1035 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P24-201ENST00000433260 MMP10P09238 476 aa7.53□□□□□ -1.2
HMGB3P24-201ENST00000433260 GYS1P13807 737 aa7.53□□□□□ -1.2
HMGB3P24-201ENST00000433260 MYL6BP14649 208 aa7.53□□□□□ -1.2
HMGB3P24-201ENST00000433260 ATN1P54259 1190 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P24-201ENST00000433260 KRT24Q2M2I5 525 aa7.53□□□□□ -1.2
HMGB3P24-201ENST00000433260 IER5LQ5T953 404 aa7.53□□□□□ -1.2
HMGB3P24-201ENST00000433260 DIEXFQ68CQ4 756 aaKnown RBP7.53□□□□□ -1.2
HMGB3P24-201ENST00000433260 PELP1Q8IZL8 1130 aaKnown RBP7.53□□□□□ -1.2
HMGB3P24-201ENST00000433260 KDM3BQ7LBC6 1761 aa7.53□□□□□ -1.2
HMGB3P24-201ENST00000433260 SOS1Q07889 1333 aaPredicted RBP7.52□□□□□ -1.2
HMGB3P24-201ENST00000433260 C4AP0C0L4 1744 aa7.52□□□□□ -1.2
HMGB3P24-201ENST00000433260 NBPF26B4DH59 902 aa7.52□□□□□ -1.21
HMGB3P24-201ENST00000433260 CHL1O00533 1208 aa7.52□□□□□ -1.21
HMGB3P24-201ENST00000433260 IL6STP40189 918 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P24-201ENST00000433260 EIF5P55010 431 aaKnown RBP7.52□□□□□ -1.21
HMGB3P24-201ENST00000433260 NBPF10Q6P3W6 841 aaKnown RBP7.52□□□□□ -1.21
HMGB3P24-201ENST00000433260 NBPF15Q8N660 670 aa7.52□□□□□ -1.21
HMGB3P24-201ENST00000433260 NLGN2Q8NFZ4 835 aa7.52□□□□□ -1.21
HMGB3P24-201ENST00000433260 SP7Q8TDD2 431 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P24-201ENST00000433260 NARFQ9UHQ1 456 aa7.52□□□□□ -1.21
HMGB3P24-201ENST00000433260 PARP3Q9Y6F1 533 aa7.52□□□□□ -1.21
HMGB3P24-201ENST00000433260 COL24A1Q17RW2 1714 aa7.52□□□□□ -1.21
HMGB3P24-201ENST00000433260 USP42Q9H9J4 1324 aaKnown RBP7.52□□□□□ -1.21
HMGB3P24-201ENST00000433260 COL15A1P39059 1388 aa7.51□□□□□ -1.21
HMGB3P24-201ENST00000433260 A0A087WZG4 1122 aa7.51□□□□□ -1.21
HMGB3P24-201ENST00000433260 G3V3G9 751 aa7.51□□□□□ -1.21
HMGB3P24-201ENST00000433260 ANXA1P04083 346 aa7.51□□□□□ -1.21
HMGB3P24-201ENST00000433260 GPR162Q16538 588 aa7.51□□□□□ -1.21
HMGB3P24-201ENST00000433260 DZIP3Q86Y13 1208 aaKnown RBP7.51□□□□□ -1.21
HMGB3P24-201ENST00000433260 BCL2L12Q9HB09 334 aa7.51□□□□□ -1.21
HMGB3P24-201ENST00000433260 MBIPQ9NS73 344 aa7.51□□□□□ -1.21
HMGB3P24-201ENST00000433260 WDR70Q9NW82 654 aa7.51□□□□□ -1.21
HMGB3P24-201ENST00000433260 CICQ96RK0 1608 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P24-201ENST00000433260 FAM177BA6PVY3 158 aa7.5□□□□□ -1.21
HMGB3P24-201ENST00000433260 PLCG2P16885 1265 aa7.5□□□□□ -1.21
HMGB3P24-201ENST00000433260 TM4SF1P30408 202 aa7.5□□□□□ -1.21
HMGB3P24-201ENST00000433260 GNAI1P63096 354 aa7.5□□□□□ -1.21
HMGB3P24-201ENST00000433260 AIMP1Q12904 312 aaKnown RBP7.5□□□□□ -1.21
HMGB3P24-201ENST00000433260 NFIXQ14938 502 aa7.5□□□□□ -1.21
HMGB3P24-201ENST00000433260 TBC1D9BQ66K14 1250 aa7.5□□□□□ -1.21
HMGB3P24-201ENST00000433260 WWC1Q8IX03 1113 aa7.5□□□□□ -1.21
HMGB3P24-201ENST00000433260 CCDC24Q8N4L8 307 aa7.5□□□□□ -1.21
HMGB3P24-201ENST00000433260 BABAM1Q9NWV8 329 aa7.5□□□□□ -1.21
HMGB3P24-201ENST00000433260 A0A0G2JLW4 131 aa7.49□□□□□ -1.21
HMGB3P24-201ENST00000433260 TCERG1O14776 1098 aaKnown RBP7.49□□□□□ -1.21
HMGB3P24-201ENST00000433260 PPP1R37O75864 691 aa7.49□□□□□ -1.21
HMGB3P24-201ENST00000433260 SEC24BO95487 1268 aa7.49□□□□□ -1.21
HMGB3P24-201ENST00000433260 SERPINB2P05120 415 aa7.49□□□□□ -1.21
HMGB3P24-201ENST00000433260 CALD1Q05682 793 aaKnown RBP7.49□□□□□ -1.21
HMGB3P24-201ENST00000433260 DDR1Q08345 913 aa7.49□□□□□ -1.21
HMGB3P24-201ENST00000433260 HLFQ16534 295 aa7.49□□□□□ -1.21
HMGB3P24-201ENST00000433260 DUSP27Q5VZP5 1158 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms