RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 NUTM1Q86Y26 1132 aa8.09□□□□□ -1.11
NIPAL3-205ENST00000432012 DCBLD2Q96PD2 775 aa8.09□□□□□ -1.11
NIPAL3-205ENST00000432012 BACH2Q9BYV9 841 aa8.09□□□□□ -1.11
NIPAL3-205ENST00000432012 LGR5O75473 907 aa8.09□□□□□ -1.11
NIPAL3-205ENST00000432012 APLP1P51693 650 aa8.09□□□□□ -1.11
NIPAL3-205ENST00000432012 ERICH6BQ5W0A0 696 aa8.09□□□□□ -1.11
NIPAL3-205ENST00000432012 NAIPQ13075 1403 aa8.09□□□□□ -1.11
NIPAL3-205ENST00000432012 COL14A1Q05707 1796 aaKnown RBP8.09□□□□□ -1.11
NIPAL3-205ENST00000432012 TRIM37O94972 964 aa8.09□□□□□ -1.12
NIPAL3-205ENST00000432012 PARNO95453 639 aaKnown RBP8.09□□□□□ -1.12
NIPAL3-205ENST00000432012 TNS4Q8IZW8 715 aa8.09□□□□□ -1.12
NIPAL3-205ENST00000432012 RBM46Q8TBY0 533 aaKnown RBP8.09□□□□□ -1.12
NIPAL3-205ENST00000432012 NCLP19338 710 aaKnown RBP8.08□□□□□ -1.12
NIPAL3-205ENST00000432012 PSME1Q06323 249 aa8.08□□□□□ -1.12
NIPAL3-205ENST00000432012 ZNF211Q13398 564 aaPredicted RBP8.08□□□□□ -1.12
NIPAL3-205ENST00000432012 ESCO1Q5FWF5 840 aa8.08□□□□□ -1.12
NIPAL3-205ENST00000432012 FBXO33Q7Z6M2 555 aa8.08□□□□□ -1.12
NIPAL3-205ENST00000432012 ARHGEF10O15013 1369 aa8.08□□□□□ -1.12
NIPAL3-205ENST00000432012 SBNO2Q9Y2G9 1366 aa8.08□□□□□ -1.12
NIPAL3-205ENST00000432012 SLAIN1Q8ND83 568 aa8.08□□□□□ -1.12
NIPAL3-205ENST00000432012 MYH16Q9H6N6 1097 aa8.08□□□□□ -1.12
NIPAL3-205ENST00000432012 ARID4AP29374 1257 aaPredicted RBP8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 ANAPC15P60006 121 aa8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 FAM198AQ9UFP1 575 aa8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 ANKRD30AQ9BXX3 1397 aa8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 SPATA31A5Q5VU36 1347 aa8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 SPATA31A7Q8IWB4 1347 aa8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 RCCD1A6NED2 376 aa8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 POTEIP0CG38 1075 aa8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 SEMA3FQ13275 785 aa8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 MTMR3Q13615 1198 aa8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 FHDC1Q9C0D6 1143 aaPredicted RBP8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 GABBR1Q9UBS5 961 aa8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 METP08581 1390 aa8.07□□□□□ -1.12
NIPAL3-205ENST00000432012 ABCA3Q99758 1704 aa8.06□□□□□ -1.12
NIPAL3-205ENST00000432012 WASHC2AQ641Q2 1341 aa8.06□□□□□ -1.12
NIPAL3-205ENST00000432012 TNS3Q68CZ2 1445 aa8.06□□□□□ -1.12
NIPAL3-205ENST00000432012 NR6A1Q15406 480 aa8.06□□□□□ -1.12
NIPAL3-205ENST00000432012 GPR162Q16538 588 aa8.06□□□□□ -1.12
NIPAL3-205ENST00000432012 LAS1LQ9Y4W2 734 aaKnown RBP8.06□□□□□ -1.12
NIPAL3-205ENST00000432012 GRIN3BO60391 1043 aa8.06□□□□□ -1.12
NIPAL3-205ENST00000432012 ERCC5P28715 1186 aaPredicted RBP8.06□□□□□ -1.12
NIPAL3-205ENST00000432012 FAM43BQ6ZT52 329 aaPredicted RBP8.06□□□□□ -1.12
NIPAL3-205ENST00000432012 FAM161BQ96MY7 647 aa8.06□□□□□ -1.12
NIPAL3-205ENST00000432012 ANO8Q9HCE9 1232 aaPredicted RBP8.06□□□□□ -1.12
NIPAL3-205ENST00000432012 SBNO1A3KN83 1393 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 USP17L3A6NCW0 530 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 USP17L4A6NCW7 530 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 CFAP99D6REC4 459 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 HSPA5P11021 654 aaKnown RBP8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 USP17L1Q7RTZ2 530 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 RRP7BPQ9NSQ0 103 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 PPP4R2Q9NY27 417 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 PPP1R3GB7ZBB8 358 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 PHF14O94880 888 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 ABL1P00519 1130 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 TUSC1Q2TAM9 212 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 MTFR1LQ9H019 292 aa8.05□□□□□ -1.12
NIPAL3-205ENST00000432012 PER1O15534 1290 aaPredicted RBP8.04□□□□□ -1.12
NIPAL3-205ENST00000432012 FOXO3O43524 673 aa8.04□□□□□ -1.12
NIPAL3-205ENST00000432012 FAM174AQ8TBP5 190 aa8.04□□□□□ -1.12
NIPAL3-205ENST00000432012 PLCD4Q9BRC7 762 aa8.04□□□□□ -1.12
NIPAL3-205ENST00000432012 METRNQ9UJH8 293 aa8.04□□□□□ -1.12
NIPAL3-205ENST00000432012 PLSCR1O15162 318 aa8.04□□□□□ -1.12
NIPAL3-205ENST00000432012 ERCC3P19447 782 aa8.04□□□□□ -1.12
NIPAL3-205ENST00000432012 LDLRAD1Q5T700 205 aa8.04□□□□□ -1.12
NIPAL3-205ENST00000432012 B4GALNT3Q6L9W6 998 aa8.04□□□□□ -1.12
NIPAL3-205ENST00000432012 DHX38Q92620 1227 aaKnown RBP8.04□□□□□ -1.12
NIPAL3-205ENST00000432012 RNF19AQ9NV58 838 aa8.04□□□□□ -1.12
NIPAL3-205ENST00000432012 HDLBPQ00341 1268 aaKnown RBP8.03□□□□□ -1.12
NIPAL3-205ENST00000432012 CANXP27824 592 aaKnown RBP8.03□□□□□ -1.12
NIPAL3-205ENST00000432012 PDE6BP35913 854 aa8.03□□□□□ -1.12
NIPAL3-205ENST00000432012 EIF4G2P78344 907 aaKnown RBP eCLIP8.03□□□□□ -1.12
NIPAL3-205ENST00000432012 PDE3BQ13370 1112 aa8.03□□□□□ -1.12
NIPAL3-205ENST00000432012 LNPKQ9C0E8 428 aa8.03□□□□□ -1.12
NIPAL3-205ENST00000432012 H3BRB1 525 aa8.02□□□□□ -1.12
NIPAL3-205ENST00000432012 CLCN6P51797 869 aa8.02□□□□□ -1.12
NIPAL3-205ENST00000432012 KCNH2Q12809 1159 aa8.02□□□□□ -1.12
NIPAL3-205ENST00000432012 ZNF326Q5BKZ1 582 aaKnown RBP8.02□□□□□ -1.12
NIPAL3-205ENST00000432012 KRT28Q7Z3Y7 464 aa8.02□□□□□ -1.12
NIPAL3-205ENST00000432012 SYMPKQ92797 1274 aaKnown RBP8.02□□□□□ -1.12
NIPAL3-205ENST00000432012 TUT1Q9H6E5 874 aaKnown RBP8.02□□□□□ -1.12
NIPAL3-205ENST00000432012 ATP2B4P23634 1241 aa8.02□□□□□ -1.13
NIPAL3-205ENST00000432012 ZBTB3Q9H5J0 574 aa8.02□□□□□ -1.13
NIPAL3-205ENST00000432012 IQSEC3Q9UPP2 1182 aaPredicted RBP8.02□□□□□ -1.13
NIPAL3-205ENST00000432012 ATP10DQ9P241 1426 aa8.02□□□□□ -1.13
NIPAL3-205ENST00000432012 USP17L15C9J2P7 530 aa8.01□□□□□ -1.13
NIPAL3-205ENST00000432012 USP17L10C9JJH3 530 aa8.01□□□□□ -1.13
NIPAL3-205ENST00000432012 USP17L13C9JLJ4 530 aa8.01□□□□□ -1.13
NIPAL3-205ENST00000432012 USP17L12C9JPN9 530 aa8.01□□□□□ -1.13
NIPAL3-205ENST00000432012 USP17L11C9JVI0 530 aa8.01□□□□□ -1.13
NIPAL3-205ENST00000432012 USP17L21D6R901 530 aa8.01□□□□□ -1.13
NIPAL3-205ENST00000432012 USP17L18D6R9N7 530 aa8.01□□□□□ -1.13
NIPAL3-205ENST00000432012 USP17L22D6RA61 530 aa8.01□□□□□ -1.13
NIPAL3-205ENST00000432012 USP17L17D6RBQ6 530 aa8.01□□□□□ -1.13
NIPAL3-205ENST00000432012 USP17L19D6RCP7 530 aa8.01□□□□□ -1.13
NIPAL3-205ENST00000432012 USP17L20D6RJB6 530 aa8.01□□□□□ -1.13
NIPAL3-205ENST00000432012 USP17L24Q0WX57 530 aa8.01□□□□□ -1.13
NIPAL3-205ENST00000432012 ELOAQ14241 798 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms