RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 SLC27A3Q5K4L6 730 aa23.07■■□□□ 1.28
HMGN1-206ENST00000431390 B4GALNT3Q6L9W6 998 aa23.07■■□□□ 1.28
HMGN1-206ENST00000431390 GPR162Q16538 588 aa23.06■■□□□ 1.28
HMGN1-206ENST00000431390 CCT4P50991 539 aaKnown RBP23.06■■□□□ 1.28
HMGN1-206ENST00000431390 F6X3S4 739 aa23.05■■□□□ 1.28
HMGN1-206ENST00000431390 LRP10Q7Z4F1 713 aa23.05■■□□□ 1.28
HMGN1-206ENST00000431390 SLC16A10Q8TF71 515 aa23.05■■□□□ 1.28
HMGN1-206ENST00000431390 PALLDQ8WX93 1383 aa23.04■■□□□ 1.28
HMGN1-206ENST00000431390 STARD3NLO95772 234 aa23.04■■□□□ 1.28
HMGN1-206ENST00000431390 DDX58O95786 925 aaKnown RBP23.04■■□□□ 1.28
HMGN1-206ENST00000431390 POLD1P28340 1107 aa23.04■■□□□ 1.28
HMGN1-206ENST00000431390 DNAJC10Q8IXB1 793 aa23.04■■□□□ 1.28
HMGN1-206ENST00000431390 SLC4A9Q96Q91 983 aa23.04■■□□□ 1.28
HMGN1-206ENST00000431390 ZBTB7BO15156 539 aaPredicted RBP23.03■■□□□ 1.28
HMGN1-206ENST00000431390 C1QTNF8P60827 252 aa23.03■■□□□ 1.28
HMGN1-206ENST00000431390 ZBTB40Q9NUA8 1239 aa23.03■■□□□ 1.28
HMGN1-206ENST00000431390 MYL6BP14649 208 aa23.02■■□□□ 1.28
HMGN1-206ENST00000431390 TFCP2L1Q9NZI6 479 aa23.02■■□□□ 1.28
HMGN1-206ENST00000431390 ADCY9O60503 1353 aa23.02■■□□□ 1.28
HMGN1-206ENST00000431390 PI4KAP2A4QPH2 592 aa23.01■■□□□ 1.27
HMGN1-206ENST00000431390 NBPF26B4DH59 902 aa23.01■■□□□ 1.27
HMGN1-206ENST00000431390 NBPF10Q6P3W6 841 aaKnown RBP23.01■■□□□ 1.27
HMGN1-206ENST00000431390 SLC4A10Q6U841 1118 aa23.01■■□□□ 1.27
HMGN1-206ENST00000431390 KSR2Q6VAB6 950 aa23.01■■□□□ 1.27
HMGN1-206ENST00000431390 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
HMGN1-206ENST00000431390 NBPF15Q8N660 670 aa23.01■■□□□ 1.27
HMGN1-206ENST00000431390 PI4KAP1Q8N8J0 262 aa23.01■■□□□ 1.27
HMGN1-206ENST00000431390 DNAAF4Q8WXU2 420 aa23.01■■□□□ 1.27
HMGN1-206ENST00000431390 ATP10DQ9P241 1426 aa23.01■■□□□ 1.27
HMGN1-206ENST00000431390 LOC102724428A0A0B4J2F2 783 aa23.01■■□□□ 1.27
HMGN1-206ENST00000431390 A1BGP04217 495 aa23.01■■□□□ 1.27
HMGN1-206ENST00000431390 SIK1P57059 783 aa23.01■■□□□ 1.27
HMGN1-206ENST00000431390 CYP19A1P11511 503 aaPredicted RBP23■■□□□ 1.27
HMGN1-206ENST00000431390 XAGE3Q8WTP9 111 aa23■■□□□ 1.27
HMGN1-206ENST00000431390 COPS6Q7L5N1 327 aa22.99■■□□□ 1.27
HMGN1-206ENST00000431390 NLGN2Q8NFZ4 835 aa22.99■■□□□ 1.27
HMGN1-206ENST00000431390 COL5A3P25940 1745 aaPredicted RBP22.99■■□□□ 1.27
HMGN1-206ENST00000431390 ARFGEF2Q9Y6D5 1785 aa22.97■■□□□ 1.27
HMGN1-206ENST00000431390 ATP6V1AP38606 617 aa22.97■■□□□ 1.27
HMGN1-206ENST00000431390 PIP4K2AP48426 406 aaPredicted RBP22.97■■□□□ 1.27
HMGN1-206ENST00000431390 AIMP1Q12904 312 aaKnown RBP22.97■■□□□ 1.27
HMGN1-206ENST00000431390 MAP3K2Q9Y2U5 619 aa22.97■■□□□ 1.27
HMGN1-206ENST00000431390 SRCIN1Q9C0H9 1055 aa22.97■■□□□ 1.27
HMGN1-206ENST00000431390 BEND3Q5T5X7 828 aa22.96■■□□□ 1.27
HMGN1-206ENST00000431390 ANKRD13DQ6ZTN6 518 aa22.96■■□□□ 1.27
HMGN1-206ENST00000431390 CCNL1Q9UK58 526 aaPredicted RBP22.96■■□□□ 1.27
HMGN1-206ENST00000431390 PCDHB15Q9Y5E8 787 aa22.96■■□□□ 1.27
HMGN1-206ENST00000431390 RIC3Q7Z5B4 369 aa22.95■■□□□ 1.26
HMGN1-206ENST00000431390 GOLGB1Q14789 3259 aaKnown RBP22.95■■□□□ 1.26
HMGN1-206ENST00000431390 IBTKQ9P2D0 1353 aaPredicted RBP22.95■■□□□ 1.26
HMGN1-206ENST00000431390 TAF1LQ8IZX4 1826 aa22.94■■□□□ 1.26
HMGN1-206ENST00000431390 PLBD2Q8NHP8 589 aa22.94■■□□□ 1.26
HMGN1-206ENST00000431390 ALDH1L1O75891 902 aa22.93■■□□□ 1.26
HMGN1-206ENST00000431390 ITPK1Q13572 414 aa22.93■■□□□ 1.26
HMGN1-206ENST00000431390 KDM2BQ8NHM5 1336 aa22.93■■□□□ 1.26
HMGN1-206ENST00000431390 MSH5O43196 834 aa22.93■■□□□ 1.26
HMGN1-206ENST00000431390 CENPQQ7L2Z9 268 aaPredicted RBP22.93■■□□□ 1.26
HMGN1-206ENST00000431390 GNAI3P08754 354 aa22.92■■□□□ 1.26
HMGN1-206ENST00000431390 IL6STP40189 918 aaPredicted RBP22.92■■□□□ 1.26
HMGN1-206ENST00000431390 LINS1Q8NG48 757 aa22.92■■□□□ 1.26
HMGN1-206ENST00000431390 MEIS3Q99687 375 aa22.92■■□□□ 1.26
HMGN1-206ENST00000431390 METTL22Q9BUU2 404 aaPredicted RBP22.92■■□□□ 1.26
HMGN1-206ENST00000431390 ZBTB1Q9Y2K1 713 aa22.92■■□□□ 1.26
HMGN1-206ENST00000431390 NEXNQ0ZGT2 675 aa22.91■■□□□ 1.26
HMGN1-206ENST00000431390 COL23A1Q86Y22 540 aaPredicted RBP22.91■■□□□ 1.26
HMGN1-206ENST00000431390 CCDC87Q9NVE4 849 aa22.91■■□□□ 1.26
HMGN1-206ENST00000431390 MYH14Q7Z406 1995 aaKnown RBP22.91■■□□□ 1.26
HMGN1-206ENST00000431390 YBX3P16989 372 aaKnown RBP eCLIP22.9■■□□□ 1.266e-11■□□□□ 9.1
HMGN1-206ENST00000431390 CRKLP46109 303 aaKnown RBP22.9■■□□□ 1.26
HMGN1-206ENST00000431390 TTLL7Q6ZT98 887 aa22.9■■□□□ 1.26
HMGN1-206ENST00000431390 RWDD1Q9H446 243 aaPredicted RBP22.9■■□□□ 1.26
HMGN1-206ENST00000431390 HDAC1Q13547 482 aaPredicted RBP22.89■■□□□ 1.26
HMGN1-206ENST00000431390 MSL1Q68DK7 614 aa22.89■■□□□ 1.26
HMGN1-206ENST00000431390 INTS5Q6P9B9 1019 aaKnown RBP22.89■■□□□ 1.26
HMGN1-206ENST00000431390 AFDNP55196 1824 aaKnown RBP22.89■■□□□ 1.25
HMGN1-206ENST00000431390 USP44Q9H0E7 712 aa22.89■■□□□ 1.25
HMGN1-206ENST00000431390 IGHDP01880 384 aa22.88■■□□□ 1.25
HMGN1-206ENST00000431390 CNTNAP4Q9C0A0 1308 aa22.87■■□□□ 1.25
HMGN1-206ENST00000431390 KIF6Q6ZMV9 814 aa22.87■■□□□ 1.25
HMGN1-206ENST00000431390 C1orf115Q9H7X2 142 aa22.87■■□□□ 1.25
HMGN1-206ENST00000431390 GNAI2P04899 355 aa22.86■■□□□ 1.25
HMGN1-206ENST00000431390 IGKV5-2P06315 115 aa22.86■■□□□ 1.25
HMGN1-206ENST00000431390 EIF5P55010 431 aaKnown RBP22.86■■□□□ 1.25
HMGN1-206ENST00000431390 NPM2Q86SE8 214 aaKnown RBP22.86■■□□□ 1.25
HMGN1-206ENST00000431390 LINC00116Q8NCU8 138 aa22.86■■□□□ 1.25
HMGN1-206ENST00000431390 MYD88Q99836 296 aa22.86■■□□□ 1.25
HMGN1-206ENST00000431390 RPAP2Q8IXW5 612 aaPredicted RBP22.85■■□□□ 1.25
HMGN1-206ENST00000431390 ZNF330Q9Y3S2 320 aaPredicted RBP22.85■■□□□ 1.25
HMGN1-206ENST00000431390 MAP3K15Q6ZN16 1313 aa22.85■■□□□ 1.25
HMGN1-206ENST00000431390 NEURL1BA8MQ27 555 aa22.84■■□□□ 1.25
HMGN1-206ENST00000431390 GRIN3BO60391 1043 aa22.84■■□□□ 1.25
HMGN1-206ENST00000431390 UBTFL1P0CB47 393 aaPredicted RBP22.84■■□□□ 1.25
HMGN1-206ENST00000431390 CWF19L2Q2TBE0 894 aaKnown RBP22.84■■□□□ 1.25
HMGN1-206ENST00000431390 RC3H1Q5TC82 1133 aaKnown RBP22.84■■□□□ 1.25
HMGN1-206ENST00000431390 C4BP0C0L5 1744 aa22.84■■□□□ 1.25
HMGN1-206ENST00000431390 ZBTB3Q9H5J0 574 aa22.84■■□□□ 1.25
HMGN1-206ENST00000431390 HDAC5Q9UQL6 1122 aa22.84■■□□□ 1.25
HMGN1-206ENST00000431390 UTYO14607 1347 aa22.83■■□□□ 1.25
HMGN1-206ENST00000431390 ANKRD36CQ5JPF3 1778 aa22.83■■□□□ 1.25
HMGN1-206ENST00000431390 ANKRD44Q8N8A2 993 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms