RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 FER1L6Q2WGJ9 1857 aa19.94■□□□□ 0.78
PTCD1-204ENST00000430982 COL15A1P39059 1388 aa19.94■□□□□ 0.78
PTCD1-204ENST00000430982 CARMIL3Q8ND23 1372 aa19.94■□□□□ 0.78
PTCD1-204ENST00000430982 APAF1O14727 1248 aa19.93■□□□□ 0.78
PTCD1-204ENST00000430982 TEX13AQ9BXU3 409 aaPredicted RBP19.93■□□□□ 0.78
PTCD1-204ENST00000430982 CREBZFQ9NS37 354 aa19.93■□□□□ 0.78
PTCD1-204ENST00000430982 UBR2Q8IWV8 1755 aa19.93■□□□□ 0.78
PTCD1-204ENST00000430982 ANKRD31Q8N7Z5 1873 aa19.92■□□□□ 0.78
PTCD1-204ENST00000430982 ZBTB1Q9Y2K1 713 aa19.92■□□□□ 0.78
PTCD1-204ENST00000430982 SERPINB2P05120 415 aa19.91■□□□□ 0.78
PTCD1-204ENST00000430982 CANXP27824 592 aaKnown RBP19.91■□□□□ 0.78
PTCD1-204ENST00000430982 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
PTCD1-204ENST00000430982 SNRPA1P09661 255 aaKnown RBP19.9■□□□□ 0.78
PTCD1-204ENST00000430982 TSPYL4Q9UJ04 414 aa19.9■□□□□ 0.78
PTCD1-204ENST00000430982 COL11A2P13942 1736 aaPredicted RBP19.9■□□□□ 0.78
PTCD1-204ENST00000430982 PRAMEF22A3QJZ6 481 aa19.89■□□□□ 0.77
PTCD1-204ENST00000430982 C2CD5Q86YS7 1000 aa19.89■□□□□ 0.77
PTCD1-204ENST00000430982 LTBP3Q9NS15 1303 aa19.89■□□□□ 0.77
PTCD1-204ENST00000430982 CNTNAP1P78357 1384 aa19.88■□□□□ 0.77
PTCD1-204ENST00000430982 CHADLQ6NUI6 762 aa19.88■□□□□ 0.77
PTCD1-204ENST00000430982 DPY19L2Q6NUT2 758 aa19.88■□□□□ 0.77
PTCD1-204ENST00000430982 LAS1LQ9Y4W2 734 aaKnown RBP19.88■□□□□ 0.77
PTCD1-204ENST00000430982 USP16Q9Y5T5 823 aa19.88■□□□□ 0.77
PTCD1-204ENST00000430982 SCN7AQ01118 1682 aa19.87■□□□□ 0.77
PTCD1-204ENST00000430982 H0YIN7 160 aa19.87■□□□□ 0.77
PTCD1-204ENST00000430982 A1BGP04217 495 aa19.87■□□□□ 0.77
PTCD1-204ENST00000430982 EIF4A1P60842 406 aaKnown RBP19.87■□□□□ 0.77
PTCD1-204ENST00000430982 PRDM10Q9NQV6 1147 aa19.87■□□□□ 0.77
PTCD1-204ENST00000430982 ZNF330Q9Y3S2 320 aaPredicted RBP19.87■□□□□ 0.77
PTCD1-204ENST00000430982 FOXN1O15353 648 aa19.86■□□□□ 0.77
PTCD1-204ENST00000430982 SLC34A2O95436 690 aa19.86■□□□□ 0.77
PTCD1-204ENST00000430982 PASKQ96RG2 1323 aa19.85■□□□□ 0.77
PTCD1-204ENST00000430982 POTEIP0CG38 1075 aa19.85■□□□□ 0.77
PTCD1-204ENST00000430982 POTEJP0CG39 1038 aa19.85■□□□□ 0.77
PTCD1-204ENST00000430982 FAM9BQ8IZU0 186 aa19.85■□□□□ 0.77
PTCD1-204ENST00000430982 MKRN1Q9UHC7 482 aaKnown RBP19.85■□□□□ 0.77
PTCD1-204ENST00000430982 ARFGEF2Q9Y6D5 1785 aa19.85■□□□□ 0.77
PTCD1-204ENST00000430982 BABAM1Q9NWV8 329 aa19.84■□□□□ 0.77
PTCD1-204ENST00000430982 PDZRN3Q9UPQ7 1066 aa19.84■□□□□ 0.77
PTCD1-204ENST00000430982 A0A087WZG4 1122 aa19.83■□□□□ 0.77
PTCD1-204ENST00000430982 PIP4K2AP48426 406 aaPredicted RBP19.83■□□□□ 0.77
PTCD1-204ENST00000430982 EIF5P55010 431 aaKnown RBP19.83■□□□□ 0.77
PTCD1-204ENST00000430982 ERFEQ4G0M1 354 aa19.83■□□□□ 0.77
PTCD1-204ENST00000430982 NPM2Q86SE8 214 aaKnown RBP19.83■□□□□ 0.77
PTCD1-204ENST00000430982 KDM3BQ7LBC6 1761 aa19.83■□□□□ 0.76
PTCD1-204ENST00000430982 SCN4AP35499 1836 aa19.82■□□□□ 0.76
PTCD1-204ENST00000430982 IL6STP40189 918 aaPredicted RBP19.82■□□□□ 0.76
PTCD1-204ENST00000430982 BRIP1Q9BX63 1249 aa19.82■□□□□ 0.76
PTCD1-204ENST00000430982 ADAMTSL1Q8N6G6 1762 aa19.81■□□□□ 0.76
PTCD1-204ENST00000430982 CHL1O00533 1208 aa19.81■□□□□ 0.76
PTCD1-204ENST00000430982 CALD1Q05682 793 aaKnown RBP19.81■□□□□ 0.76
PTCD1-204ENST00000430982 C21orf2O43822 256 aa19.8■□□□□ 0.76
PTCD1-204ENST00000430982 L3MBTL3Q96JM7 780 aaPredicted RBP19.8■□□□□ 0.76
PTCD1-204ENST00000430982 SLX4Q8IY92 1834 aa19.79■□□□□ 0.76
PTCD1-204ENST00000430982 DDNO94850 711 aaPredicted RBP19.79■□□□□ 0.76
PTCD1-204ENST00000430982 PDE6BP35913 854 aa19.79■□□□□ 0.76
PTCD1-204ENST00000430982 TBC1D9BQ66K14 1250 aa19.79■□□□□ 0.76
PTCD1-204ENST00000430982 PRR5LQ6MZQ0 368 aa19.79■□□□□ 0.76
PTCD1-204ENST00000430982 CFAP44Q96MT7 982 aa19.79■□□□□ 0.76
PTCD1-204ENST00000430982 TAOK3Q9H2K8 898 aa19.79■□□□□ 0.76
PTCD1-204ENST00000430982 TBC1D2BQ9UPU7 963 aa19.79■□□□□ 0.76
PTCD1-204ENST00000430982 NBPF26B4DH59 902 aa19.78■□□□□ 0.76
PTCD1-204ENST00000430982 CTCFP49711 727 aaPredicted RBP19.78■□□□□ 0.76
PTCD1-204ENST00000430982 NBPF10Q6P3W6 841 aaKnown RBP19.78■□□□□ 0.76
PTCD1-204ENST00000430982 LDHDQ86WU2 507 aa19.78■□□□□ 0.76
PTCD1-204ENST00000430982 NBPF15Q8N660 670 aa19.78■□□□□ 0.76
PTCD1-204ENST00000430982 SALL2Q9Y467 1007 aaPredicted RBP19.78■□□□□ 0.76
PTCD1-204ENST00000430982 DIEXFQ68CQ4 756 aaKnown RBP19.77■□□□□ 0.76
PTCD1-204ENST00000430982 ZNF622Q969S3 477 aaKnown RBP eCLIP19.77■□□□□ 0.768e-7■□□□□ 8.5
PTCD1-204ENST00000430982 IFT57Q9NWB7 429 aa19.77■□□□□ 0.76
PTCD1-204ENST00000430982 WBP1LQ9NX94 342 aa19.77■□□□□ 0.76
PTCD1-204ENST00000430982 BCORQ6W2J9 1755 aa19.76■□□□□ 0.75
PTCD1-204ENST00000430982 IQCA1LA6NCM1 817 aa19.76■□□□□ 0.75
PTCD1-204ENST00000430982 ITGBL1O95965 494 aaPredicted RBP19.76■□□□□ 0.75
PTCD1-204ENST00000430982 EIF2S2P20042 333 aaKnown RBP19.76■□□□□ 0.75
PTCD1-204ENST00000430982 VEGFBP49765 207 aa19.76■□□□□ 0.75
PTCD1-204ENST00000430982 GNAI1P63096 354 aa19.76■□□□□ 0.75
PTCD1-204ENST00000430982 KRT24Q2M2I5 525 aa19.76■□□□□ 0.75
PTCD1-204ENST00000430982 BICDL1Q6ZP65 573 aa19.76■□□□□ 0.75
PTCD1-204ENST00000430982 DZIP3Q86Y13 1208 aaKnown RBP19.76■□□□□ 0.75
PTCD1-204ENST00000430982 MBIPQ9NS73 344 aa19.76■□□□□ 0.75
PTCD1-204ENST00000430982 CACNA1SQ13698 1873 aa19.75■□□□□ 0.75
PTCD1-204ENST00000430982 ZNF853P0CG23 659 aa19.75■□□□□ 0.75
PTCD1-204ENST00000430982 CCDC27Q2M243 656 aa19.75■□□□□ 0.75
PTCD1-204ENST00000430982 STYK1Q6J9G0 422 aa19.75■□□□□ 0.75
PTCD1-204ENST00000430982 NGEFQ8N5V2 710 aa19.75■□□□□ 0.75
PTCD1-204ENST00000430982 TAF1DQ9H5J8 278 aaPredicted RBP19.75■□□□□ 0.75
PTCD1-204ENST00000430982 TMEM88BA6NKF7 163 aa19.74■□□□□ 0.75
PTCD1-204ENST00000430982 SRGNP10124 158 aa19.74■□□□□ 0.75
PTCD1-204ENST00000430982 MYL6BP14649 208 aa19.74■□□□□ 0.75
PTCD1-204ENST00000430982 WWC1Q8IX03 1113 aa19.74■□□□□ 0.75
PTCD1-204ENST00000430982 C7orf43Q8WVR3 580 aa19.74■□□□□ 0.75
PTCD1-204ENST00000430982 NECTIN2Q92692 538 aa19.74■□□□□ 0.75
PTCD1-204ENST00000430982 CNKSR1Q969H4 720 aa19.74■□□□□ 0.75
PTCD1-204ENST00000430982 ZNF219Q9P2Y4 722 aaPredicted RBP19.74■□□□□ 0.75
PTCD1-204ENST00000430982 THSD7BQ9C0I4 1608 aa19.73■□□□□ 0.75
PTCD1-204ENST00000430982 LAMB4A4D0S4 1761 aa19.73■□□□□ 0.75
PTCD1-204ENST00000430982 CCER2I3L3R5 266 aa19.73■□□□□ 0.75
PTCD1-204ENST00000430982 CAMTA2O94983 1202 aa19.73■□□□□ 0.75
PTCD1-204ENST00000430982 SOGA3Q5TF21 947 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms