RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 RNMTO43148 476 aaKnown RBP20.33■□□□□ 0.85
PCDH8P1-201ENST00000428983 RHPN1Q8TCX5 695 aa20.33■□□□□ 0.85
PCDH8P1-201ENST00000428983 KRT28Q7Z3Y7 464 aa20.33■□□□□ 0.84
PCDH8P1-201ENST00000428983 OS9Q13438 667 aaPredicted RBP20.32■□□□□ 0.84
PCDH8P1-201ENST00000428983 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
PCDH8P1-201ENST00000428983 AKAP4Q5JQC9 854 aa20.32■□□□□ 0.84
PCDH8P1-201ENST00000428983 SSH3Q8TE77 659 aa20.32■□□□□ 0.84
PCDH8P1-201ENST00000428983 ZNF710Q8N1W2 664 aa20.32■□□□□ 0.84
PCDH8P1-201ENST00000428983 KCNH5Q8NCM2 988 aa20.32■□□□□ 0.84
PCDH8P1-201ENST00000428983 DDX54Q8TDD1 881 aaKnown RBP20.32■□□□□ 0.84
PCDH8P1-201ENST00000428983 MYL6BP14649 208 aa20.31■□□□□ 0.84
PCDH8P1-201ENST00000428983 CHRNA2Q15822 529 aa20.31■□□□□ 0.84
PCDH8P1-201ENST00000428983 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
PCDH8P1-201ENST00000428983 TCHHQ07283 1943 aa20.31■□□□□ 0.84
PCDH8P1-201ENST00000428983 ADCY9O60503 1353 aa20.31■□□□□ 0.84
PCDH8P1-201ENST00000428983 CUL4AQ13619 759 aa20.31■□□□□ 0.84
PCDH8P1-201ENST00000428983 NFAT5O94916 1531 aa20.31■□□□□ 0.84
PCDH8P1-201ENST00000428983 MYRIPQ8NFW9 859 aa20.3■□□□□ 0.84
PCDH8P1-201ENST00000428983 CPA1P15085 419 aa20.3■□□□□ 0.84
PCDH8P1-201ENST00000428983 KLHDC4Q8TBB5 520 aa20.3■□□□□ 0.84
PCDH8P1-201ENST00000428983 NLRP2Q9NX02 1062 aa20.3■□□□□ 0.84
PCDH8P1-201ENST00000428983 SPG7Q9UQ90 795 aa20.3■□□□□ 0.84
PCDH8P1-201ENST00000428983 NOLC1Q14978 699 aaKnown RBP eCLIP20.29■□□□□ 0.84
PCDH8P1-201ENST00000428983 SMAP1Q8IYB5 467 aaPredicted RBP20.29■□□□□ 0.84
PCDH8P1-201ENST00000428983 CHD2O14647 1828 aaKnown RBP20.29■□□□□ 0.84
PCDH8P1-201ENST00000428983 GIGYF1O75420 1035 aaPredicted RBP20.29■□□□□ 0.84
PCDH8P1-201ENST00000428983 HCLS1P14317 486 aaPredicted RBP20.29■□□□□ 0.84
PCDH8P1-201ENST00000428983 CWC27Q6UX04 472 aaKnown RBP20.29■□□□□ 0.84
PCDH8P1-201ENST00000428983 C9orf78Q9NZ63 289 aaPredicted RBP20.29■□□□□ 0.84
PCDH8P1-201ENST00000428983 ADCY5O95622 1261 aa20.29■□□□□ 0.84
PCDH8P1-201ENST00000428983 PLCB2Q00722 1185 aa20.29■□□□□ 0.84
PCDH8P1-201ENST00000428983 MTERF4Q7Z6M4 381 aaKnown RBP20.29■□□□□ 0.84
PCDH8P1-201ENST00000428983 CCDC94Q9BW85 323 aaPredicted RBP20.29■□□□□ 0.84
PCDH8P1-201ENST00000428983 SIL1Q9H173 461 aa20.28■□□□□ 0.84
PCDH8P1-201ENST00000428983 ADGRL3Q9HAR2 1447 aa20.28■□□□□ 0.84
PCDH8P1-201ENST00000428983 PI4K2BQ8TCG2 481 aa20.28■□□□□ 0.84
PCDH8P1-201ENST00000428983 CBX1P83916 185 aa20.27■□□□□ 0.84
PCDH8P1-201ENST00000428983 SYAP1Q96A49 352 aaPredicted RBP20.27■□□□□ 0.84
PCDH8P1-201ENST00000428983 CNPY2Q9Y2B0 182 aa20.27■□□□□ 0.83
PCDH8P1-201ENST00000428983 POLA2Q14181 598 aa20.26■□□□□ 0.83
PCDH8P1-201ENST00000428983 PIBF1Q8WXW3 757 aa20.26■□□□□ 0.83
PCDH8P1-201ENST00000428983 NFATC2IPQ8NCF5 419 aa20.26■□□□□ 0.83
PCDH8P1-201ENST00000428983 DBF4Q9UBU7 674 aaPredicted RBP20.25■□□□□ 0.83
PCDH8P1-201ENST00000428983 STAP2Q9UGK3 403 aa20.25■□□□□ 0.83
PCDH8P1-201ENST00000428983 MCM2P49736 904 aa20.24■□□□□ 0.83
PCDH8P1-201ENST00000428983 ZSCAN20P17040 1043 aaPredicted RBP20.23■□□□□ 0.83
PCDH8P1-201ENST00000428983 RASEFQ8IZ41 740 aa20.23■□□□□ 0.83
PCDH8P1-201ENST00000428983 INTS4Q96HW7 963 aaKnown RBP20.23■□□□□ 0.83
PCDH8P1-201ENST00000428983 CCDC8Q9H0W5 538 aaPredicted RBP20.23■□□□□ 0.83
PCDH8P1-201ENST00000428983 BABAM1Q9NWV8 329 aa20.23■□□□□ 0.83
PCDH8P1-201ENST00000428983 NPHP4O75161 1426 aaPredicted RBP20.23■□□□□ 0.83
PCDH8P1-201ENST00000428983 CSB-PGBD3P0DP91 1061 aa20.23■□□□□ 0.83
PCDH8P1-201ENST00000428983 MCCP23508 829 aa20.23■□□□□ 0.83
PCDH8P1-201ENST00000428983 ATP2B3Q16720 1220 aa20.23■□□□□ 0.83
PCDH8P1-201ENST00000428983 KIF1BPQ96EK5 621 aa20.23■□□□□ 0.83
PCDH8P1-201ENST00000428983 SUCLG2Q96I99 432 aa20.23■□□□□ 0.83
PCDH8P1-201ENST00000428983 COL9A3Q14050 684 aaPredicted RBP20.22■□□□□ 0.83
PCDH8P1-201ENST00000428983 AP5Z1O43299 807 aa20.22■□□□□ 0.83
PCDH8P1-201ENST00000428983 KAZALD1Q96I82 304 aa20.22■□□□□ 0.83
PCDH8P1-201ENST00000428983 TLR7Q9NYK1 1049 aaKnown RBP20.21■□□□□ 0.83
PCDH8P1-201ENST00000428983 CCDC9Q9Y3X0 531 aaKnown RBP20.21■□□□□ 0.83
PCDH8P1-201ENST00000428983 PHF14O94880 888 aa20.21■□□□□ 0.83
PCDH8P1-201ENST00000428983 AMOTQ4VCS5 1084 aa20.21■□□□□ 0.83
PCDH8P1-201ENST00000428983 PPP4R3BQ5MIZ7 849 aa20.21■□□□□ 0.83
PCDH8P1-201ENST00000428983 BICC1Q9H694 974 aaKnown RBP20.21■□□□□ 0.83
PCDH8P1-201ENST00000428983 GIMAP6Q6P9H5 292 aa20.2■□□□□ 0.82
PCDH8P1-201ENST00000428983 NDUFB9Q9Y6M9 179 aa20.2■□□□□ 0.82
PCDH8P1-201ENST00000428983 WDR33Q9C0J8 1336 aaKnown RBP20.2■□□□□ 0.82
PCDH8P1-201ENST00000428983 KSR2Q6VAB6 950 aa20.2■□□□□ 0.82
PCDH8P1-201ENST00000428983 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
PCDH8P1-201ENST00000428983 ERBB3P21860 1342 aa20.2■□□□□ 0.82
PCDH8P1-201ENST00000428983 RGPD5Q99666 1765 aa20.19■□□□□ 0.82
PCDH8P1-201ENST00000428983 SPDYE4A6NLX3 237 aa20.19■□□□□ 0.82
PCDH8P1-201ENST00000428983 FIBPO43427 364 aa20.19■□□□□ 0.82
PCDH8P1-201ENST00000428983 PRIMPOLQ96LW4 560 aa20.19■□□□□ 0.82
PCDH8P1-201ENST00000428983 RPAP1Q9BWH6 1393 aaPredicted RBP20.19■□□□□ 0.82
PCDH8P1-201ENST00000428983 PDIA6Q15084 440 aa20.19■□□□□ 0.82
PCDH8P1-201ENST00000428983 CCDC183Q5T5S1 534 aa20.19■□□□□ 0.82
PCDH8P1-201ENST00000428983 RIC3Q7Z5B4 369 aa20.19■□□□□ 0.82
PCDH8P1-201ENST00000428983 PTH1RQ03431 593 aa20.18■□□□□ 0.82
PCDH8P1-201ENST00000428983 AACSQ86V21 672 aa20.18■□□□□ 0.82
PCDH8P1-201ENST00000428983 SPC24Q8NBT2 197 aa20.18■□□□□ 0.82
PCDH8P1-201ENST00000428983 RAPGEF4Q8WZA2 1011 aa20.18■□□□□ 0.82
PCDH8P1-201ENST00000428983 BCL2L12Q9HB09 334 aa20.18■□□□□ 0.82
PCDH8P1-201ENST00000428983 RAB11FIP3O75154 756 aa20.18■□□□□ 0.82
PCDH8P1-201ENST00000428983 DMTNQ08495 405 aa20.18■□□□□ 0.82
PCDH8P1-201ENST00000428983 EDC3Q96F86 508 aaKnown RBP20.18■□□□□ 0.82
PCDH8P1-201ENST00000428983 ZNF496Q96IT1 587 aaPredicted RBP20.18■□□□□ 0.82
PCDH8P1-201ENST00000428983 PYCARDQ9ULZ3 195 aa20.18■□□□□ 0.82
PCDH8P1-201ENST00000428983 KIF3AQ9Y496 699 aa20.18■□□□□ 0.82
PCDH8P1-201ENST00000428983 CHGBP05060 677 aa20.17■□□□□ 0.82
PCDH8P1-201ENST00000428983 IGKV5-2P06315 115 aa20.17■□□□□ 0.82
PCDH8P1-201ENST00000428983 HMGN5P82970 282 aaKnown RBP20.17■□□□□ 0.82
PCDH8P1-201ENST00000428983 UVSSAQ2YD98 709 aa20.17■□□□□ 0.82
PCDH8P1-201ENST00000428983 EPHA10Q5JZY3 1008 aa20.17■□□□□ 0.82
PCDH8P1-201ENST00000428983 FAM184AQ8NB25 1140 aa20.17■□□□□ 0.82
PCDH8P1-201ENST00000428983 CACNA1FO60840 1977 aa20.17■□□□□ 0.82
PCDH8P1-201ENST00000428983 ANAPC15P60006 121 aa20.17■□□□□ 0.82
PCDH8P1-201ENST00000428983 ZNF790Q6PG37 636 aa20.17■□□□□ 0.82
PCDH8P1-201ENST00000428983 COPS6Q7L5N1 327 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms