RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 KIF18AQ8NI77 898 aa17.03■□□□□ 0.32
SYNGAP1-203ENST00000428982 C1orf115Q9H7X2 142 aa17.03■□□□□ 0.32
SYNGAP1-203ENST00000428982 BRPF1P55201 1214 aaPredicted RBP17.03■□□□□ 0.32
SYNGAP1-203ENST00000428982 MRPL50Q8N5N7 158 aaKnown RBP17.03■□□□□ 0.32
SYNGAP1-203ENST00000428982 ANKRD7Q92527 254 aa17.02■□□□□ 0.32
SYNGAP1-203ENST00000428982 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.02■□□□□ 0.32
SYNGAP1-203ENST00000428982 V9GYY5 206 aaPredicted RBP17.02■□□□□ 0.32
SYNGAP1-203ENST00000428982 TULP4Q9NRJ4 1543 aa17.02■□□□□ 0.32
SYNGAP1-203ENST00000428982 ERC2O15083 957 aa17.02■□□□□ 0.32
SYNGAP1-203ENST00000428982 EIF4A2Q14240 407 aaKnown RBP17.02■□□□□ 0.32
SYNGAP1-203ENST00000428982 LRCH2Q5VUJ6 765 aa17.02■□□□□ 0.32
SYNGAP1-203ENST00000428982 TMCO3Q6UWJ1 677 aa17.02■□□□□ 0.32
SYNGAP1-203ENST00000428982 MAP3K19Q56UN5 1328 aa17.02■□□□□ 0.32
SYNGAP1-203ENST00000428982 MORC2Q9Y6X9 1032 aaPredicted RBP17.02■□□□□ 0.31
SYNGAP1-203ENST00000428982 LMBRD1Q9NUN5 540 aa17.01■□□□□ 0.31
SYNGAP1-203ENST00000428982 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
SYNGAP1-203ENST00000428982 ATP6V1DQ9Y5K8 247 aa17.01■□□□□ 0.31
SYNGAP1-203ENST00000428982 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
SYNGAP1-203ENST00000428982 PTCH1Q13635 1447 aa17.01■□□□□ 0.31
SYNGAP1-203ENST00000428982 TTLL5Q6EMB2 1281 aa17.01■□□□□ 0.31
SYNGAP1-203ENST00000428982 SLC4A10Q6U841 1118 aa17.01■□□□□ 0.31
SYNGAP1-203ENST00000428982 MAP2K2P36507 400 aa17■□□□□ 0.31
SYNGAP1-203ENST00000428982 ATP6V1AP38606 617 aa17■□□□□ 0.31
SYNGAP1-203ENST00000428982 CCT4P50991 539 aaKnown RBP17■□□□□ 0.31
SYNGAP1-203ENST00000428982 SATB1Q01826 763 aa17■□□□□ 0.31
SYNGAP1-203ENST00000428982 NEK11Q8NG66 645 aa17■□□□□ 0.31
SYNGAP1-203ENST00000428982 ANKARQ7Z5J8 1434 aa17■□□□□ 0.31
SYNGAP1-203ENST00000428982 GCP02774 474 aa17■□□□□ 0.31
SYNGAP1-203ENST00000428982 MNAT1P51948 309 aa17■□□□□ 0.31
SYNGAP1-203ENST00000428982 NCBP1Q09161 790 aaKnown RBP17■□□□□ 0.31
SYNGAP1-203ENST00000428982 DNAAF4Q8WXU2 420 aa17■□□□□ 0.31
SYNGAP1-203ENST00000428982 USHBP1Q8N6Y0 703 aa17■□□□□ 0.31
SYNGAP1-203ENST00000428982 GNAT3A8MTJ3 354 aa17■□□□□ 0.31
SYNGAP1-203ENST00000428982 USP6P35125 1406 aa16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 MYO1CO00159 1063 aa16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 GNAI3P08754 354 aa16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 MEX3CQ5U5Q3 659 aaKnown RBP16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 IQSEC2Q5JU85 1478 aa16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 TOM1O60784 492 aa16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 RDXP35241 583 aaKnown RBP16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 LMAN1P49257 510 aa16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 PLEKHF1Q96S99 279 aa16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 EIF2S2P20042 333 aaKnown RBP16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 GNL2Q13823 731 aaKnown RBP16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 ZSCAN26Q16670 478 aa16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 SYT10Q6XYQ8 523 aa16.99■□□□□ 0.31
SYNGAP1-203ENST00000428982 VAMP4O75379 141 aa16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 MYO5BQ9ULV0 1848 aa16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 TECPR2O15040 1411 aa16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 PTPRCP08575 1304 aa16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 GOLGA6L4A6NEF3 574 aa16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 NUTM2BA6NNL0 878 aaPredicted RBP16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 NUTM2EB1AL46 878 aaPredicted RBP16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 H0YHG0 523 aa16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 SARNPP82979 210 aaKnown RBP16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 SYCP1Q15431 976 aa16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 NUTM2AQ8IVF1 878 aaPredicted RBP16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 ANKRD24Q8TF21 1146 aa16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 THUMPD2Q9BTF0 503 aaKnown RBP16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 SBNO1A3KN83 1393 aa16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 TULP2O00295 520 aa16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 ZBTB7BO15156 539 aaPredicted RBP16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 AMOTQ4VCS5 1084 aa16.98■□□□□ 0.31
SYNGAP1-203ENST00000428982 PSEN1P49768 467 aa16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 TMEM63CQ9P1W3 806 aa16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 TTC22Q5TAA0 569 aa16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 CEP135Q66GS9 1140 aa16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 CEP120Q8N960 986 aa16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 ADGRL3Q9HAR2 1447 aa16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 C3P01024 1663 aa16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 PTPN14Q15678 1187 aa16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 LMTK3Q96Q04 1460 aa16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 ZNF853P0CG23 659 aa16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 NOL8Q76FK4 1167 aaKnown RBP16.97■□□□□ 0.31
SYNGAP1-203ENST00000428982 HCLS1P14317 486 aaPredicted RBP16.96■□□□□ 0.31
SYNGAP1-203ENST00000428982 GUCY2CP25092 1073 aa16.96■□□□□ 0.31
SYNGAP1-203ENST00000428982 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
SYNGAP1-203ENST00000428982 SLIT1O75093 1534 aa16.96■□□□□ 0.31
SYNGAP1-203ENST00000428982 HOXC9P31274 260 aa16.96■□□□□ 0.31
SYNGAP1-203ENST00000428982 SRCIN1Q9C0H9 1055 aa16.96■□□□□ 0.31
SYNGAP1-203ENST00000428982 SART3Q15020 963 aaKnown RBP16.96■□□□□ 0.31
SYNGAP1-203ENST00000428982 MCM10Q7L590 875 aa16.96■□□□□ 0.31
SYNGAP1-203ENST00000428982 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
SYNGAP1-203ENST00000428982 IVLP07476 585 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 E2F4Q16254 413 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 MBIPQ9NS73 344 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 DIP2AQ14689 1571 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 DCTN1Q14203 1278 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 CHRNA2Q15822 529 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 RPAINQ86UA6 219 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 IP6K1Q92551 441 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 AATKQ6ZMQ8 1374 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 GNAI2P04899 355 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 IL13P35225 146 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 GPATCH3Q96I76 525 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 DCTPP1Q9H773 170 aa16.95■□□□□ 0.3
SYNGAP1-203ENST00000428982 ZBTB12Q9Y330 459 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms