RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 MAP3K15Q6ZN16 1313 aa22.39■■□□□ 1.17
LMCD1-204ENST00000426878 N4BP2Q86UW6 1770 aaPredicted RBP22.39■■□□□ 1.17
LMCD1-204ENST00000426878 KCNA3P22001 575 aa22.38■■□□□ 1.17
LMCD1-204ENST00000426878 DUSP27Q5VZP5 1158 aa22.38■■□□□ 1.17
LMCD1-204ENST00000426878 KIF6Q6ZMV9 814 aa22.38■■□□□ 1.17
LMCD1-204ENST00000426878 TTLL7Q6ZT98 887 aa22.38■■□□□ 1.17
LMCD1-204ENST00000426878 DDX21Q9NR30 783 aaKnown RBP eCLIP22.38■■□□□ 1.17
LMCD1-204ENST00000426878 HLFQ16534 295 aa22.37■■□□□ 1.17
LMCD1-204ENST00000426878 CCER2I3L3R5 266 aa22.36■■□□□ 1.17
LMCD1-204ENST00000426878 CHD4Q14839 1912 aa22.36■■□□□ 1.17
LMCD1-204ENST00000426878 PROSER3Q2NL68 480 aa22.36■■□□□ 1.17
LMCD1-204ENST00000426878 HDGFL1Q5TGJ6 251 aa22.36■■□□□ 1.17
LMCD1-204ENST00000426878 PRR5LQ6MZQ0 368 aa22.36■■□□□ 1.17
LMCD1-204ENST00000426878 WDR63Q8IWG1 891 aa22.36■■□□□ 1.17
LMCD1-204ENST00000426878 BRCA1P38398 1863 aaKnown RBP22.35■■□□□ 1.17
LMCD1-204ENST00000426878 SENP3-EIF4A1A0A087X0R7 540 aa22.34■■□□□ 1.17
LMCD1-204ENST00000426878 NECTIN2Q92692 538 aa22.34■■□□□ 1.17
LMCD1-204ENST00000426878 BRIP1Q9BX63 1249 aa22.34■■□□□ 1.17
LMCD1-204ENST00000426878 DBF4Q9UBU7 674 aaPredicted RBP22.34■■□□□ 1.17
LMCD1-204ENST00000426878 NIP7Q9Y221 180 aaKnown RBP eCLIP22.34■■□□□ 1.17
LMCD1-204ENST00000426878 NUP98P52948 1817 aa22.34■■□□□ 1.17
LMCD1-204ENST00000426878 ATP10DQ9P241 1426 aa22.34■■□□□ 1.17
LMCD1-204ENST00000426878 CNBD1Q8NA66 436 aa22.33■■□□□ 1.17
LMCD1-204ENST00000426878 CHMP4AQ9BY43 222 aa22.33■■□□□ 1.17
LMCD1-204ENST00000426878 PIM2Q9P1W9 311 aa22.33■■□□□ 1.17
LMCD1-204ENST00000426878 PDZRN3Q9UPQ7 1066 aa22.33■■□□□ 1.17
LMCD1-204ENST00000426878 ANXA1P04083 346 aa22.32■■□□□ 1.16
LMCD1-204ENST00000426878 YY1P25490 414 aa22.32■■□□□ 1.16
LMCD1-204ENST00000426878 GIGYF2Q6Y7W6 1299 aaKnown RBP22.32■■□□□ 1.16
LMCD1-204ENST00000426878 C8orf58Q8NAV2 365 aa22.32■■□□□ 1.16
LMCD1-204ENST00000426878 CHPF2Q9P2E5 772 aa22.32■■□□□ 1.16
LMCD1-204ENST00000426878 CHRNA5P30532 468 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 COPS6Q7L5N1 327 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 NBPF5PQ86XG9 351 aaPredicted RBP22.31■■□□□ 1.16
LMCD1-204ENST00000426878 ZBTB3Q9H5J0 574 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 PDE6BP35913 854 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 ST5P78524 1137 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 TPTE2Q6XPS3 522 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 XAGE3Q8WTP9 111 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 HYPKQ9NX55 129 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 WWC3Q9ULE0 1092 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 BCS1LQ9Y276 419 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 ANKRD31Q8N7Z5 1873 aa22.3■■□□□ 1.16
LMCD1-204ENST00000426878 ZNF34Q8IZ26 560 aa22.3■■□□□ 1.16
LMCD1-204ENST00000426878 TSR2Q969E8 191 aaKnown RBP22.3■■□□□ 1.16
LMCD1-204ENST00000426878 SALL2Q9Y467 1007 aaPredicted RBP22.3■■□□□ 1.16
LMCD1-204ENST00000426878 H0YIN7 160 aa22.29■■□□□ 1.16
LMCD1-204ENST00000426878 ELL2O00472 640 aaPredicted RBP22.29■■□□□ 1.16
LMCD1-204ENST00000426878 DALRD3Q5D0E6 543 aaKnown RBP22.29■■□□□ 1.16
LMCD1-204ENST00000426878 DLEC1Q9Y238 1755 aa22.28■■□□□ 1.16
LMCD1-204ENST00000426878 NPHP1O15259 732 aa22.28■■□□□ 1.16
LMCD1-204ENST00000426878 C2CD5Q86YS7 1000 aa22.28■■□□□ 1.16
LMCD1-204ENST00000426878 ARFGEF1Q9Y6D6 1849 aa22.28■■□□□ 1.16
LMCD1-204ENST00000426878 IBTKQ9P2D0 1353 aaPredicted RBP22.28■■□□□ 1.16
LMCD1-204ENST00000426878 AIMP1Q12904 312 aaKnown RBP22.27■■□□□ 1.16
LMCD1-204ENST00000426878 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.16
LMCD1-204ENST00000426878 NYXQ9GZU5 481 aa22.27■■□□□ 1.16
LMCD1-204ENST00000426878 KLRG2A4D1S0 409 aaPredicted RBP22.26■■□□□ 1.15
LMCD1-204ENST00000426878 HSP90AB3PQ58FF7 597 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 CCDC30Q5VVM6 783 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 CCDC24Q8N4L8 307 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 TSPYL6Q8N831 410 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 UBN2Q6ZU65 1347 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 ZNF521Q96K83 1311 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 FANCIQ9NVI1 1328 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 PARP10Q53GL7 1025 aa22.25■■□□□ 1.15
LMCD1-204ENST00000426878 GPTP24298 496 aa22.24■■□□□ 1.15
LMCD1-204ENST00000426878 ANKRD13DQ6ZTN6 518 aa22.24■■□□□ 1.15
LMCD1-204ENST00000426878 PLBD2Q8NHP8 589 aa22.24■■□□□ 1.15
LMCD1-204ENST00000426878 TWISTNBQ3B726 338 aaPredicted RBP22.23■■□□□ 1.15
LMCD1-204ENST00000426878 TTLL6Q8N841 843 aa22.23■■□□□ 1.15
LMCD1-204ENST00000426878 FAM177BA6PVY3 158 aa22.23■■□□□ 1.15
LMCD1-204ENST00000426878 SRGNP10124 158 aa22.23■■□□□ 1.15
LMCD1-204ENST00000426878 TCIRG1Q13488 830 aa22.23■■□□□ 1.15
LMCD1-204ENST00000426878 SUSD4Q5VX71 490 aa22.23■■□□□ 1.15
LMCD1-204ENST00000426878 ANKRD36CQ5JPF3 1778 aa22.22■■□□□ 1.15
LMCD1-204ENST00000426878 GTF2E1P29083 439 aaPredicted RBP22.22■■□□□ 1.15
LMCD1-204ENST00000426878 GOLGA2Q08379 1002 aa22.22■■□□□ 1.15
LMCD1-204ENST00000426878 STYK1Q6J9G0 422 aa22.22■■□□□ 1.15
LMCD1-204ENST00000426878 PPP1R42Q7Z4L9 355 aa22.22■■□□□ 1.15
LMCD1-204ENST00000426878 MYH16Q9H6N6 1097 aa22.22■■□□□ 1.15
LMCD1-204ENST00000426878 SPINK5Q9NQ38 1064 aaPredicted RBP22.22■■□□□ 1.15
LMCD1-204ENST00000426878 RIC1Q4ADV7 1423 aa22.22■■□□□ 1.15
LMCD1-204ENST00000426878 COL11A2P13942 1736 aaPredicted RBP22.21■■□□□ 1.15
LMCD1-204ENST00000426878 NTSR2O95665 410 aa22.21■■□□□ 1.15
LMCD1-204ENST00000426878 MASTLQ96GX5 879 aa22.21■■□□□ 1.15
LMCD1-204ENST00000426878 RNF123Q5XPI4 1314 aa22.2■■□□□ 1.15
LMCD1-204ENST00000426878 ARHGAP27Q6ZUM4 889 aa22.2■■□□□ 1.14
LMCD1-204ENST00000426878 NLRP10Q86W26 655 aa22.2■■□□□ 1.14
LMCD1-204ENST00000426878 ZNF622Q969S3 477 aaKnown RBP eCLIP22.2■■□□□ 1.14
LMCD1-204ENST00000426878 ERFEQ4G0M1 354 aa22.19■■□□□ 1.14
LMCD1-204ENST00000426878 NUTM1Q86Y26 1132 aa22.19■■□□□ 1.14
LMCD1-204ENST00000426878 CNKSR1Q969H4 720 aa22.19■■□□□ 1.14
LMCD1-204ENST00000426878 PHAXQ9H814 394 aaKnown RBP22.19■■□□□ 1.14
LMCD1-204ENST00000426878 ABCC12Q96J65 1359 aa22.19■■□□□ 1.14
LMCD1-204ENST00000426878 NPR1P16066 1061 aa22.18■■□□□ 1.14
LMCD1-204ENST00000426878 CRY2Q49AN0 593 aa22.18■■□□□ 1.14
LMCD1-204ENST00000426878 UTP14AQ9BVJ6 771 aaKnown RBP22.18■■□□□ 1.14
LMCD1-204ENST00000426878 VAMP4O75379 141 aa22.17■■□□□ 1.14
LMCD1-204ENST00000426878 EXOSC9Q06265 439 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms