RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 FAM200AQ8TCP9 573 aa20.36■□□□□ 0.85
TRAPPC10-203ENST00000422875 WASLO00401 505 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC10-203ENST00000422875 SKILP12757 684 aa20.36■□□□□ 0.85
TRAPPC10-203ENST00000422875 FBXO31Q5XUX0 539 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC10-203ENST00000422875 JARID2Q92833 1246 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC10-203ENST00000422875 NEK1Q96PY6 1258 aa20.36■□□□□ 0.85
TRAPPC10-203ENST00000422875 DNMBPQ6XZF7 1577 aa20.36■□□□□ 0.85
TRAPPC10-203ENST00000422875 NEFHP12036 1026 aa20.36■□□□□ 0.85
TRAPPC10-203ENST00000422875 USP16Q9Y5T5 823 aa20.36■□□□□ 0.85
TRAPPC10-203ENST00000422875 A0A087WZG4 1122 aa20.36■□□□□ 0.85
TRAPPC10-203ENST00000422875 ZBTB40Q9NUA8 1239 aa20.36■□□□□ 0.85
TRAPPC10-203ENST00000422875 PER1O15534 1290 aaPredicted RBP20.35■□□□□ 0.85
TRAPPC10-203ENST00000422875 HSP90AA4PQ58FG1 418 aa20.35■□□□□ 0.85
TRAPPC10-203ENST00000422875 NAPBQ9H115 298 aa20.35■□□□□ 0.85
TRAPPC10-203ENST00000422875 ORC3Q9UBD5 711 aaPredicted RBP20.35■□□□□ 0.85
TRAPPC10-203ENST00000422875 ZNF213O14771 459 aa20.35■□□□□ 0.85
TRAPPC10-203ENST00000422875 CEP131Q9UPN4 1083 aa20.35■□□□□ 0.85
TRAPPC10-203ENST00000422875 GNG11P61952 73 aa20.35■□□□□ 0.85
TRAPPC10-203ENST00000422875 CCDC144CPQ8IYA2 1237 aa20.35■□□□□ 0.85
TRAPPC10-203ENST00000422875 MRPL50Q8N5N7 158 aaKnown RBP20.35■□□□□ 0.85
TRAPPC10-203ENST00000422875 PRDM11Q9NQV5 511 aa20.35■□□□□ 0.85
TRAPPC10-203ENST00000422875 DNAJC25Q9H1X3 360 aa20.35■□□□□ 0.85
TRAPPC10-203ENST00000422875 MAP3K2Q9Y2U5 619 aa20.35■□□□□ 0.85
TRAPPC10-203ENST00000422875 SEPT11Q9NVA2 429 aaKnown RBP20.34■□□□□ 0.85
TRAPPC10-203ENST00000422875 ZFP91Q96JP5 570 aaPredicted RBP20.34■□□□□ 0.85
TRAPPC10-203ENST00000422875 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
TRAPPC10-203ENST00000422875 KRT24Q2M2I5 525 aa20.33■□□□□ 0.85
TRAPPC10-203ENST00000422875 PAXBP1Q9Y5B6 917 aa20.33■□□□□ 0.85
TRAPPC10-203ENST00000422875 RALGAPBQ86X10 1494 aa20.33■□□□□ 0.85
TRAPPC10-203ENST00000422875 BMP2KQ9NSY1 1161 aaPredicted RBP20.33■□□□□ 0.84
TRAPPC10-203ENST00000422875 NUP88Q99567 741 aaPredicted RBP20.33■□□□□ 0.84
TRAPPC10-203ENST00000422875 BMS1Q14692 1282 aaKnown RBP20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 ENOX2Q16206 610 aaKnown RBP20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 NSD2O96028 1365 aa20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 F13A1P00488 732 aa20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 USP8P40818 1118 aa20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 ATP5J2-PTCD1G3V325 749 aa20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 SPA17Q15506 151 aa20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 DDX46Q7L014 1031 aaKnown RBP20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 MICU3Q86XE3 530 aa20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 TXLNBQ8N3L3 684 aa20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 LMAN1P49257 510 aa20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 TAF4BQ92750 862 aa20.32■□□□□ 0.84
TRAPPC10-203ENST00000422875 RBM8AQ9Y5S9 174 aaKnown RBP20.31■□□□□ 0.84
TRAPPC10-203ENST00000422875 UBE3BQ7Z3V4 1068 aa20.31■□□□□ 0.84
TRAPPC10-203ENST00000422875 AKAP2Q9Y2D5 859 aa20.31■□□□□ 0.84
TRAPPC10-203ENST00000422875 SLC12A7Q9Y666 1083 aa20.31■□□□□ 0.84
TRAPPC10-203ENST00000422875 IFIT3O14879 490 aaKnown RBP20.31■□□□□ 0.84
TRAPPC10-203ENST00000422875 PLEKHM2Q8IWE5 1019 aa20.31■□□□□ 0.84
TRAPPC10-203ENST00000422875 CARD14Q9BXL6 1004 aa20.31■□□□□ 0.84
TRAPPC10-203ENST00000422875 CAVIN2O95810 425 aa20.31■□□□□ 0.84
TRAPPC10-203ENST00000422875 ANAPC15P60006 121 aa20.31■□□□□ 0.84
TRAPPC10-203ENST00000422875 DCTPP1Q9H773 170 aa20.31■□□□□ 0.84
TRAPPC10-203ENST00000422875 DNAI1Q9UI46 699 aa20.31■□□□□ 0.84
TRAPPC10-203ENST00000422875 VAMP4O75379 141 aa20.3■□□□□ 0.84
TRAPPC10-203ENST00000422875 KRT222Q8N1A0 295 aa20.3■□□□□ 0.84
TRAPPC10-203ENST00000422875 ZBTB9Q96C00 473 aa20.3■□□□□ 0.84
TRAPPC10-203ENST00000422875 RBSNQ9H1K0 784 aa20.3■□□□□ 0.84
TRAPPC10-203ENST00000422875 RNF216Q9NWF9 866 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC10-203ENST00000422875 GOLGA8AA7E2F4 631 aa20.3■□□□□ 0.84
TRAPPC10-203ENST00000422875 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.3■□□□□ 0.84
TRAPPC10-203ENST00000422875 ASXL1Q8IXJ9 1541 aa20.3■□□□□ 0.84
TRAPPC10-203ENST00000422875 CCDC12Q8WUD4 166 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC10-203ENST00000422875 ZNF397Q8NF99 534 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC10-203ENST00000422875 USP5P45974 858 aa20.29■□□□□ 0.84
TRAPPC10-203ENST00000422875 DMRT2Q9Y5R5 561 aa20.29■□□□□ 0.84
TRAPPC10-203ENST00000422875 PTGS1P23219 599 aa20.29■□□□□ 0.84
TRAPPC10-203ENST00000422875 CCDC196A0A1B0GTZ2 297 aa20.29■□□□□ 0.84
TRAPPC10-203ENST00000422875 KDM2BQ8NHM5 1336 aa20.29■□□□□ 0.84
TRAPPC10-203ENST00000422875 SHTN1A0MZ66 631 aa20.28■□□□□ 0.84
TRAPPC10-203ENST00000422875 MAP9Q49MG5 647 aa20.28■□□□□ 0.84
TRAPPC10-203ENST00000422875 HYPKQ9NX55 129 aa20.28■□□□□ 0.84
TRAPPC10-203ENST00000422875 RANBP6O60518 1105 aaKnown RBP20.28■□□□□ 0.84
TRAPPC10-203ENST00000422875 GOLGA6L7A0A1B0GV03 622 aa20.28■□□□□ 0.84
TRAPPC10-203ENST00000422875 IARSP41252 1262 aaKnown RBP20.28■□□□□ 0.84
TRAPPC10-203ENST00000422875 TYRO3Q06418 890 aa20.28■□□□□ 0.84
TRAPPC10-203ENST00000422875 ZBTB3Q9H5J0 574 aa20.28■□□□□ 0.84
TRAPPC10-203ENST00000422875 SMARCC1Q92922 1105 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC10-203ENST00000422875 IFIT5Q13325 482 aaKnown RBP20.27■□□□□ 0.84
TRAPPC10-203ENST00000422875 KCNH5Q8NCM2 988 aa20.27■□□□□ 0.84
TRAPPC10-203ENST00000422875 ZSCAN16Q9H4T2 348 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC10-203ENST00000422875 ANKRD36BQ8N2N9 1353 aa20.27■□□□□ 0.84
TRAPPC10-203ENST00000422875 HS1BP3Q53T59 392 aa20.27■□□□□ 0.84
TRAPPC10-203ENST00000422875 CCDC102BQ68D86 513 aa20.27■□□□□ 0.84
TRAPPC10-203ENST00000422875 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
TRAPPC10-203ENST00000422875 AK2P54819 239 aa20.27■□□□□ 0.83
TRAPPC10-203ENST00000422875 CEP85Q6P2H3 762 aa20.27■□□□□ 0.83
TRAPPC10-203ENST00000422875 AOPEPQ8N6M6 819 aa20.27■□□□□ 0.83
TRAPPC10-203ENST00000422875 USP26Q9BXU7 913 aa20.27■□□□□ 0.83
TRAPPC10-203ENST00000422875 LIG1P18858 919 aa20.26■□□□□ 0.83
TRAPPC10-203ENST00000422875 UBASH3AP57075 661 aa20.26■□□□□ 0.83
TRAPPC10-203ENST00000422875 CCDC171Q6TFL3 1326 aa20.26■□□□□ 0.83
TRAPPC10-203ENST00000422875 FOXO3O43524 673 aa20.26■□□□□ 0.83
TRAPPC10-203ENST00000422875 CACNA2D4Q7Z3S7 1137 aa20.26■□□□□ 0.83
TRAPPC10-203ENST00000422875 OTUD7AQ8TE49 926 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC10-203ENST00000422875 POLR3AO14802 1390 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC10-203ENST00000422875 BICDL1Q6ZP65 573 aa20.26■□□□□ 0.83
TRAPPC10-203ENST00000422875 PHACTR3Q96KR7 559 aa20.26■□□□□ 0.83
TRAPPC10-203ENST00000422875 HMG20BQ9P0W2 317 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms