RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 NBPF14Q5TI25 921 aa11.74□□□□□ -0.53
CMSS1-201ENST00000421999 KIF1BPQ96EK5 621 aa11.74□□□□□ -0.53
CMSS1-201ENST00000421999 USP16Q9Y5T5 823 aa11.74□□□□□ -0.53
CMSS1-201ENST00000421999 PNPLA6Q8IY17 1366 aa11.74□□□□□ -0.53
CMSS1-201ENST00000421999 LINS1Q8NG48 757 aa11.73□□□□□ -0.53
CMSS1-201ENST00000421999 TCEAL9Q9UHQ7 104 aa11.73□□□□□ -0.53
CMSS1-201ENST00000421999 USP19O94966 1318 aa11.73□□□□□ -0.53
CMSS1-201ENST00000421999 GIGYF1O75420 1035 aaPredicted RBP11.73□□□□□ -0.53
CMSS1-201ENST00000421999 IFIT1P09914 478 aaKnown RBP11.73□□□□□ -0.53
CMSS1-201ENST00000421999 TRIM29Q14134 588 aa11.73□□□□□ -0.53
CMSS1-201ENST00000421999 ERVV-2B6SEH9 535 aa11.73□□□□□ -0.53
CMSS1-201ENST00000421999 GRM8O00222 908 aa11.73□□□□□ -0.53
CMSS1-201ENST00000421999 TRMT2AQ8IZ69 625 aaKnown RBP11.72□□□□□ -0.53
CMSS1-201ENST00000421999 MED14O60244 1454 aa11.72□□□□□ -0.53
CMSS1-201ENST00000421999 DZIP3Q86Y13 1208 aaKnown RBP11.72□□□□□ -0.53
CMSS1-201ENST00000421999 C22orf23Q9BZE7 217 aa11.72□□□□□ -0.53
CMSS1-201ENST00000421999 RTCBQ9Y3I0 505 aaKnown RBP11.72□□□□□ -0.53
CMSS1-201ENST00000421999 HOXB7P09629 217 aa11.72□□□□□ -0.53
CMSS1-201ENST00000421999 CERKQ8TCT0 537 aa11.72□□□□□ -0.53
CMSS1-201ENST00000421999 SETDB2Q96T68 719 aa11.72□□□□□ -0.53
CMSS1-201ENST00000421999 ZBTB40Q9NUA8 1239 aa11.72□□□□□ -0.53
CMSS1-201ENST00000421999 MYO3AQ8NEV4 1616 aa11.72□□□□□ -0.53
CMSS1-201ENST00000421999 LDHAL6AQ6ZMR3 332 aa11.72□□□□□ -0.53
CMSS1-201ENST00000421999 DDX46Q7L014 1031 aaKnown RBP11.72□□□□□ -0.53
CMSS1-201ENST00000421999 CCAR1Q8IX12 1150 aaKnown RBP11.72□□□□□ -0.53
CMSS1-201ENST00000421999 GZF1Q9H116 711 aaPredicted RBP11.72□□□□□ -0.53
CMSS1-201ENST00000421999 CAVIN4Q5BKX8 364 aa11.71□□□□□ -0.53
CMSS1-201ENST00000421999 CCDC8Q9H0W5 538 aaPredicted RBP11.71□□□□□ -0.53
CMSS1-201ENST00000421999 OVOS2A0A0J9YW53 1432 aa11.71□□□□□ -0.53
CMSS1-201ENST00000421999 OVOS2Q6IE36 1432 aa11.71□□□□□ -0.53
CMSS1-201ENST00000421999 ALDH1L1O75891 902 aa11.71□□□□□ -0.53
CMSS1-201ENST00000421999 QTRT2Q9H974 415 aaKnown RBP11.71□□□□□ -0.53
CMSS1-201ENST00000421999 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.54
CMSS1-201ENST00000421999 ANKRD18BA2A2Z9 1011 aa11.71□□□□□ -0.54
CMSS1-201ENST00000421999 CYP27B1O15528 508 aa11.71□□□□□ -0.54
CMSS1-201ENST00000421999 ASAP1Q9ULH1 1129 aa11.71□□□□□ -0.54
CMSS1-201ENST00000421999 FOSBP53539 338 aa11.7□□□□□ -0.54
CMSS1-201ENST00000421999 NIP7Q9Y221 180 aaKnown RBP eCLIP11.7□□□□□ -0.54
CMSS1-201ENST00000421999 ARHGEF28Q8N1W1 1705 aaKnown RBP11.7□□□□□ -0.54
CMSS1-201ENST00000421999 UBR1Q8IWV7 1749 aa11.7□□□□□ -0.54
CMSS1-201ENST00000421999 ZBTB7BO15156 539 aaPredicted RBP11.7□□□□□ -0.54
CMSS1-201ENST00000421999 NRDCO43847 1150 aa11.7□□□□□ -0.54
CMSS1-201ENST00000421999 SART3Q15020 963 aaKnown RBP11.7□□□□□ -0.54
CMSS1-201ENST00000421999 TMOD2Q9NZR1 351 aa11.7□□□□□ -0.54
CMSS1-201ENST00000421999 KDM4AO75164 1064 aa11.7□□□□□ -0.54
CMSS1-201ENST00000421999 SLC3A2P08195 630 aaKnown RBP11.7□□□□□ -0.54
CMSS1-201ENST00000421999 LMBR1LQ6UX01 489 aa11.7□□□□□ -0.54
CMSS1-201ENST00000421999 ANKRD44Q8N8A2 993 aa11.7□□□□□ -0.54
CMSS1-201ENST00000421999 BACH2Q9BYV9 841 aa11.7□□□□□ -0.54
CMSS1-201ENST00000421999 NACAP1Q9BZK3 213 aa11.7□□□□□ -0.54
CMSS1-201ENST00000421999 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
CMSS1-201ENST00000421999 MX1P20591 662 aa11.69□□□□□ -0.54
CMSS1-201ENST00000421999 CREBRFQ8IUR6 639 aa11.69□□□□□ -0.54
CMSS1-201ENST00000421999 GNPATO15228 680 aa11.69□□□□□ -0.54
CMSS1-201ENST00000421999 RAB11FIP3O75154 756 aa11.69□□□□□ -0.54
CMSS1-201ENST00000421999 ZNF853P0CG23 659 aa11.69□□□□□ -0.54
CMSS1-201ENST00000421999 CDC5LQ99459 802 aaKnown RBP11.69□□□□□ -0.54
CMSS1-201ENST00000421999 CCNL1Q9UK58 526 aaPredicted RBP11.69□□□□□ -0.54
CMSS1-201ENST00000421999 GOLGA6L6A8MZA4 724 aa11.69□□□□□ -0.54
CMSS1-201ENST00000421999 HIP1O00291 1037 aa11.69□□□□□ -0.54
CMSS1-201ENST00000421999 TSHZ3Q63HK5 1081 aa11.69□□□□□ -0.54
CMSS1-201ENST00000421999 UNC5CLQ8IV45 518 aa11.69□□□□□ -0.54
CMSS1-201ENST00000421999 HDAC1Q13547 482 aaPredicted RBP11.69□□□□□ -0.54
CMSS1-201ENST00000421999 AKAP2Q9Y2D5 859 aa11.68□□□□□ -0.54
CMSS1-201ENST00000421999 ST5P78524 1137 aa11.68□□□□□ -0.54
CMSS1-201ENST00000421999 DNTTIP2Q5QJE6 756 aaKnown RBP11.68□□□□□ -0.54
CMSS1-201ENST00000421999 NLRP3Q96P20 1036 aa11.68□□□□□ -0.54
CMSS1-201ENST00000421999 BOLA2Q9H3K6 86 aa11.68□□□□□ -0.54
CMSS1-201ENST00000421999 TRPC5Q9UL62 973 aaPredicted RBP11.68□□□□□ -0.54
CMSS1-201ENST00000421999 PA2G4Q9UQ80 394 aaKnown RBP11.68□□□□□ -0.54
CMSS1-201ENST00000421999 VPS37CA5D8V6 355 aaPredicted RBP11.68□□□□□ -0.54
CMSS1-201ENST00000421999 CD163L1Q9NR16 1453 aa11.68□□□□□ -0.54
CMSS1-201ENST00000421999 SOS2Q07890 1332 aaPredicted RBP11.68□□□□□ -0.54
CMSS1-201ENST00000421999 ATP8B2P98198 1209 aa11.67□□□□□ -0.54
CMSS1-201ENST00000421999 CEP85Q6P2H3 762 aa11.67□□□□□ -0.54
CMSS1-201ENST00000421999 POLD1P28340 1107 aa11.67□□□□□ -0.54
CMSS1-201ENST00000421999 TDO2P48775 406 aa11.67□□□□□ -0.54
CMSS1-201ENST00000421999 DRC7Q8IY82 874 aa11.67□□□□□ -0.54
CMSS1-201ENST00000421999 ZSCAN25Q6NSZ9 544 aa11.67□□□□□ -0.54
CMSS1-201ENST00000421999 RNF123Q5XPI4 1314 aa11.67□□□□□ -0.54
CMSS1-201ENST00000421999 APBA3O96018 575 aa11.67□□□□□ -0.54
CMSS1-201ENST00000421999 PROSER3Q2NL68 480 aa11.67□□□□□ -0.54
CMSS1-201ENST00000421999 FAM89AQ96GI7 184 aa11.67□□□□□ -0.54
CMSS1-201ENST00000421999 MST1RQ04912 1400 aa11.66□□□□□ -0.54
CMSS1-201ENST00000421999 NBPF7P0C2Y1 421 aaPredicted RBP11.66□□□□□ -0.54
CMSS1-201ENST00000421999 CSPP1Q1MSJ5 1256 aa11.66□□□□□ -0.54
CMSS1-201ENST00000421999 PLBD2Q8NHP8 589 aa11.66□□□□□ -0.54
CMSS1-201ENST00000421999 RHPN1Q8TCX5 695 aa11.66□□□□□ -0.54
CMSS1-201ENST00000421999 STK32BQ9NY57 414 aa11.66□□□□□ -0.54
CMSS1-201ENST00000421999 SAFBQ15424 915 aaKnown RBP eCLIP11.66□□□□□ -0.54
CMSS1-201ENST00000421999 CWC27Q6UX04 472 aaKnown RBP11.66□□□□□ -0.54
CMSS1-201ENST00000421999 METTL22Q9BUU2 404 aaPredicted RBP11.66□□□□□ -0.54
CMSS1-201ENST00000421999 SMC3Q9UQE7 1217 aa11.66□□□□□ -0.54
CMSS1-201ENST00000421999 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.65□□□□□ -0.54
CMSS1-201ENST00000421999 GLRX3O76003 335 aaKnown RBP11.65□□□□□ -0.54
CMSS1-201ENST00000421999 PSMA5P28066 241 aa11.65□□□□□ -0.54
CMSS1-201ENST00000421999 HSPA1LP34931 641 aa11.65□□□□□ -0.54
CMSS1-201ENST00000421999 KCNQ4P56696 695 aa11.65□□□□□ -0.54
CMSS1-201ENST00000421999 TPTE2Q6XPS3 522 aa11.65□□□□□ -0.54
CMSS1-201ENST00000421999 C16orf71Q8IYS4 520 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms