RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 ERVV-2B6SEH9 535 aa8.84□□□□□ -0.99
CPS1-202ENST00000417946 TEFQ10587 303 aa8.84□□□□□ -0.99
CPS1-202ENST00000417946 DDB1Q16531 1140 aa8.84□□□□□ -0.99
CPS1-202ENST00000417946 TWISTNBQ3B726 338 aaPredicted RBP8.84□□□□□ -0.99
CPS1-202ENST00000417946 NFATC2IPQ8NCF5 419 aa8.84□□□□□ -0.99
CPS1-202ENST00000417946 TMC2Q8TDI7 906 aa8.84□□□□□ -0.99
CPS1-202ENST00000417946 BCL2L13Q9BXK5 485 aa8.84□□□□□ -0.99
CPS1-202ENST00000417946 TNNQ9UQP3 1299 aa8.84□□□□□ -0.99
CPS1-202ENST00000417946 CCDC9Q9Y3X0 531 aaKnown RBP8.84□□□□□ -0.99
CPS1-202ENST00000417946 BTAF1O14981 1849 aa8.84□□□□□ -0.99
CPS1-202ENST00000417946 PRAMEF22A3QJZ6 481 aa8.83□□□□□ -1
CPS1-202ENST00000417946 BTBD11A6QL63 1104 aa8.83□□□□□ -1
CPS1-202ENST00000417946 EXOC5O00471 708 aa8.83□□□□□ -1
CPS1-202ENST00000417946 ELL2O00472 640 aaPredicted RBP8.83□□□□□ -1
CPS1-202ENST00000417946 PLIN1O60240 522 aa8.83□□□□□ -1
CPS1-202ENST00000417946 BRPF1P55201 1214 aaPredicted RBP8.83□□□□□ -1
CPS1-202ENST00000417946 SLC39A6Q13433 755 aa8.83□□□□□ -1
CPS1-202ENST00000417946 C20orf194Q5TEA3 1177 aa8.83□□□□□ -1
CPS1-202ENST00000417946 GPR153Q6NV75 609 aa8.83□□□□□ -1
CPS1-202ENST00000417946 MRPL50Q8N5N7 158 aaKnown RBP8.83□□□□□ -1
CPS1-202ENST00000417946 ZNF831Q5JPB2 1677 aa8.83□□□□□ -1
CPS1-202ENST00000417946 RREB1Q92766 1687 aa8.83□□□□□ -1
CPS1-202ENST00000417946 KAT6BQ8WYB5 2073 aa8.82□□□□□ -1
CPS1-202ENST00000417946 PTGER2P43116 358 aa8.82□□□□□ -1
CPS1-202ENST00000417946 IRX6P78412 446 aaPredicted RBP8.82□□□□□ -1
CPS1-202ENST00000417946 ALDH1L2Q3SY69 923 aa8.82□□□□□ -1
CPS1-202ENST00000417946 ZNF790Q6PG37 636 aa8.82□□□□□ -1
CPS1-202ENST00000417946 ZNF687Q8N1G0 1237 aa8.82□□□□□ -1
CPS1-202ENST00000417946 PIGBQ92521 554 aa8.82□□□□□ -1
CPS1-202ENST00000417946 ZNF496Q96IT1 587 aaPredicted RBP8.82□□□□□ -1
CPS1-202ENST00000417946 GTF3C3Q9Y5Q9 886 aa8.82□□□□□ -1
CPS1-202ENST00000417946 LY75O60449 1722 aa8.82□□□□□ -1
CPS1-202ENST00000417946 COL5A3P25940 1745 aaPredicted RBP8.82□□□□□ -1
CPS1-202ENST00000417946 SOS1Q07889 1333 aaPredicted RBP8.81□□□□□ -1
CPS1-202ENST00000417946 TCERG1O14776 1098 aaKnown RBP8.81□□□□□ -1
CPS1-202ENST00000417946 RGL2O15211 777 aa8.81□□□□□ -1
CPS1-202ENST00000417946 GIGYF1O75420 1035 aaPredicted RBP8.81□□□□□ -1
CPS1-202ENST00000417946 HOXB7P09629 217 aa8.81□□□□□ -1
CPS1-202ENST00000417946 RLBP1P12271 317 aa8.81□□□□□ -1
CPS1-202ENST00000417946 CABP4P57796 275 aa8.81□□□□□ -1
CPS1-202ENST00000417946 PTF1AQ7RTS3 328 aa8.81□□□□□ -1
CPS1-202ENST00000417946 ZNF428Q96B54 188 aa8.81□□□□□ -1
CPS1-202ENST00000417946 QTRT2Q9H974 415 aaKnown RBP8.81□□□□□ -1
CPS1-202ENST00000417946 RBM6P78332 1123 aaKnown RBP8.8□□□□□ -1
CPS1-202ENST00000417946 ARSIQ5FYB1 569 aa8.8□□□□□ -1
CPS1-202ENST00000417946 POTEAQ6S8J7 498 aa8.8□□□□□ -1
CPS1-202ENST00000417946 SEPT12Q8IYM1 358 aa8.8□□□□□ -1
CPS1-202ENST00000417946 SLC4A9Q96Q91 983 aa8.8□□□□□ -1
CPS1-202ENST00000417946 ATG3Q9NT62 314 aa8.8□□□□□ -1
CPS1-202ENST00000417946 SMC4Q9NTJ3 1288 aa8.8□□□□□ -1
CPS1-202ENST00000417946 ASAP1Q9ULH1 1129 aa8.8□□□□□ -1
CPS1-202ENST00000417946 NUP188Q5SRE5 1749 aa8.8□□□□□ -1
CPS1-202ENST00000417946 MYH14Q7Z406 1995 aaKnown RBP8.79□□□□□ -1
CPS1-202ENST00000417946 KCNQ2O43526 872 aa8.79□□□□□ -1
CPS1-202ENST00000417946 PRIM1P49642 420 aaKnown RBP8.79□□□□□ -1
CPS1-202ENST00000417946 PDIA6Q15084 440 aa8.79□□□□□ -1
CPS1-202ENST00000417946 PROSER3Q2NL68 480 aa8.79□□□□□ -1
CPS1-202ENST00000417946 FAM182BQ5T319 152 aa8.79□□□□□ -1
CPS1-202ENST00000417946 G2E3Q7L622 706 aa8.79□□□□□ -1
CPS1-202ENST00000417946 LRP10Q7Z4F1 713 aa8.79□□□□□ -1
CPS1-202ENST00000417946 TAF1LQ8IZX4 1826 aa8.79□□□□□ -1
CPS1-202ENST00000417946 TNS1Q9HBL0 1735 aaKnown RBP8.79□□□□□ -1
CPS1-202ENST00000417946 ABCC4O15439 1325 aa8.79□□□□□ -1
CPS1-202ENST00000417946 TRIM27P14373 513 aa8.78□□□□□ -1
CPS1-202ENST00000417946 TMOD3Q9NYL9 352 aa8.78□□□□□ -1
CPS1-202ENST00000417946 NOB1Q9ULX3 412 aaKnown RBP8.78□□□□□ -1
CPS1-202ENST00000417946 ARFGEF2Q9Y6D5 1785 aa8.77□□□□□ -1.01
CPS1-202ENST00000417946 C2orf72A6NCS6 295 aa8.77□□□□□ -1.01
CPS1-202ENST00000417946 RXRBP28702 533 aa8.77□□□□□ -1.01
CPS1-202ENST00000417946 HDGFL1Q5TGJ6 251 aa8.77□□□□□ -1.01
CPS1-202ENST00000417946 EXOC6Q8TAG9 804 aa8.77□□□□□ -1.01
CPS1-202ENST00000417946 PANK1Q8TE04 598 aa8.77□□□□□ -1.01
CPS1-202ENST00000417946 ACSBG1Q96GR2 724 aa8.77□□□□□ -1.01
CPS1-202ENST00000417946 FMNL2Q96PY5 1086 aa8.77□□□□□ -1.01
CPS1-202ENST00000417946 CRBNQ96SW2 442 aa8.77□□□□□ -1.01
CPS1-202ENST00000417946 KIF16BQ96L93 1317 aa8.77□□□□□ -1.01
CPS1-202ENST00000417946 NBPF26B4DH59 902 aa8.76□□□□□ -1.01
CPS1-202ENST00000417946 TULP1O00294 542 aaPredicted RBP8.76□□□□□ -1.01
CPS1-202ENST00000417946 ANXA1P04083 346 aa8.76□□□□□ -1.01
CPS1-202ENST00000417946 SNRPA1P09661 255 aaKnown RBP8.76□□□□□ -1.01
CPS1-202ENST00000417946 PDE3AQ14432 1141 aa8.76□□□□□ -1.01
CPS1-202ENST00000417946 NBPF14Q5TI25 921 aa8.76□□□□□ -1.01
CPS1-202ENST00000417946 ZKSCAN2Q63HK3 967 aa8.76□□□□□ -1.01
CPS1-202ENST00000417946 NBPF10Q6P3W6 841 aaKnown RBP8.76□□□□□ -1.01
CPS1-202ENST00000417946 ATF7IPQ6VMQ6 1270 aa8.76□□□□□ -1.01
CPS1-202ENST00000417946 NBPF15Q8N660 670 aa8.76□□□□□ -1.01
CPS1-202ENST00000417946 ARHGAP45Q92619 1136 aa8.76□□□□□ -1.01
CPS1-202ENST00000417946 NECTIN2Q92692 538 aa8.76□□□□□ -1.01
CPS1-202ENST00000417946 FRAT1Q92837 279 aaPredicted RBP8.76□□□□□ -1.01
CPS1-202ENST00000417946 RNF166Q96A37 237 aaPredicted RBP8.76□□□□□ -1.01
CPS1-202ENST00000417946 RYDENQ9NUL5 291 aaKnown RBP8.76□□□□□ -1.01
CPS1-202ENST00000417946 CHPF2Q9P2E5 772 aa8.76□□□□□ -1.01
CPS1-202ENST00000417946 USP16Q9Y5T5 823 aa8.76□□□□□ -1.01
CPS1-202ENST00000417946 PXDNLA1KZ92 1463 aa8.76□□□□□ -1.01
CPS1-202ENST00000417946 ADCY9O60503 1353 aa8.75□□□□□ -1.01
CPS1-202ENST00000417946 PALLDQ8WX93 1383 aa8.75□□□□□ -1.01
CPS1-202ENST00000417946 SLC34A2O95436 690 aa8.75□□□□□ -1.01
CPS1-202ENST00000417946 CCDC30Q5VVM6 783 aa8.75□□□□□ -1.01
CPS1-202ENST00000417946 DNAJC10Q8IXB1 793 aa8.75□□□□□ -1.01
CPS1-202ENST00000417946 TTC5Q8N0Z6 440 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms