RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 MAP3K15Q6ZN16 1313 aa18.43■□□□□ 0.54
SLC13A3-205ENST00000417157 NBPF5PQ86XG9 351 aaPredicted RBP18.42■□□□□ 0.54
SLC13A3-205ENST00000417157 FAM9BQ8IZU0 186 aa18.42■□□□□ 0.54
SLC13A3-205ENST00000417157 NIP7Q9Y221 180 aaKnown RBP eCLIP18.42■□□□□ 0.54
SLC13A3-205ENST00000417157 BCS1LQ9Y276 419 aa18.42■□□□□ 0.54
SLC13A3-205ENST00000417157 PDE6BP35913 854 aa18.41■□□□□ 0.54
SLC13A3-205ENST00000417157 PRR5LQ6MZQ0 368 aa18.41■□□□□ 0.54
SLC13A3-205ENST00000417157 WWC1Q8IX03 1113 aa18.41■□□□□ 0.54
SLC13A3-205ENST00000417157 BRIP1Q9BX63 1249 aa18.41■□□□□ 0.54
SLC13A3-205ENST00000417157 WWC3Q9ULE0 1092 aa18.41■□□□□ 0.54
SLC13A3-205ENST00000417157 AFDNP55196 1824 aaKnown RBP18.41■□□□□ 0.54
SLC13A3-205ENST00000417157 IL16Q14005 1332 aa18.41■□□□□ 0.54
SLC13A3-205ENST00000417157 ATP10DQ9P241 1426 aa18.4■□□□□ 0.54
SLC13A3-205ENST00000417157 N4BP2Q86UW6 1770 aaPredicted RBP18.4■□□□□ 0.54
SLC13A3-205ENST00000417157 DALRD3Q5D0E6 543 aaKnown RBP18.4■□□□□ 0.54
SLC13A3-205ENST00000417157 DUSP27Q5VZP5 1158 aa18.4■□□□□ 0.54
SLC13A3-205ENST00000417157 DDX21Q9NR30 783 aaKnown RBP eCLIP18.4■□□□□ 0.54
SLC13A3-205ENST00000417157 DBF4Q9UBU7 674 aaPredicted RBP18.4■□□□□ 0.54
SLC13A3-205ENST00000417157 H0YIN7 160 aa18.39■□□□□ 0.53
SLC13A3-205ENST00000417157 PDIA6Q15084 440 aa18.39■□□□□ 0.53
SLC13A3-205ENST00000417157 KRT24Q2M2I5 525 aa18.39■□□□□ 0.53
SLC13A3-205ENST00000417157 TPTE2Q6XPS3 522 aa18.39■□□□□ 0.53
SLC13A3-205ENST00000417157 TTLL7Q6ZT98 887 aa18.39■□□□□ 0.53
SLC13A3-205ENST00000417157 NECTIN2Q92692 538 aa18.39■□□□□ 0.53
SLC13A3-205ENST00000417157 ZBTB3Q9H5J0 574 aa18.39■□□□□ 0.53
SLC13A3-205ENST00000417157 KCNA3P22001 575 aa18.38■□□□□ 0.53
SLC13A3-205ENST00000417157 CHRNA5P30532 468 aa18.38■□□□□ 0.53
SLC13A3-205ENST00000417157 HLFQ16534 295 aa18.38■□□□□ 0.53
SLC13A3-205ENST00000417157 NYXQ9GZU5 481 aa18.38■□□□□ 0.53
SLC13A3-205ENST00000417157 CHD4Q14839 1912 aa18.37■□□□□ 0.53
SLC13A3-205ENST00000417157 GTF2E1P29083 439 aaPredicted RBP18.37■□□□□ 0.53
SLC13A3-205ENST00000417157 HSP90AB3PQ58FF7 597 aa18.37■□□□□ 0.53
SLC13A3-205ENST00000417157 GIGYF2Q6Y7W6 1299 aaKnown RBP18.37■□□□□ 0.53
SLC13A3-205ENST00000417157 LRP10Q7Z4F1 713 aa18.37■□□□□ 0.53
SLC13A3-205ENST00000417157 C2CD5Q86YS7 1000 aa18.37■□□□□ 0.53
SLC13A3-205ENST00000417157 HYPKQ9NX55 129 aa18.37■□□□□ 0.53
SLC13A3-205ENST00000417157 CHPF2Q9P2E5 772 aa18.37■□□□□ 0.53
SLC13A3-205ENST00000417157 IBTKQ9P2D0 1353 aaPredicted RBP18.37■□□□□ 0.53
SLC13A3-205ENST00000417157 PROSER3Q2NL68 480 aa18.36■□□□□ 0.53
SLC13A3-205ENST00000417157 WDR63Q8IWG1 891 aa18.36■□□□□ 0.53
SLC13A3-205ENST00000417157 BRCA1P38398 1863 aaKnown RBP18.35■□□□□ 0.53
SLC13A3-205ENST00000417157 CCER2I3L3R5 266 aa18.35■□□□□ 0.53
SLC13A3-205ENST00000417157 ANXA1P04083 346 aa18.35■□□□□ 0.53
SLC13A3-205ENST00000417157 PARP10Q53GL7 1025 aa18.35■□□□□ 0.53
SLC13A3-205ENST00000417157 COPS6Q7L5N1 327 aa18.35■□□□□ 0.53
SLC13A3-205ENST00000417157 TTLL6Q8N841 843 aa18.35■□□□□ 0.53
SLC13A3-205ENST00000417157 XAGE3Q8WTP9 111 aa18.35■□□□□ 0.53
SLC13A3-205ENST00000417157 AIMP1Q12904 312 aaKnown RBP18.34■□□□□ 0.53
SLC13A3-205ENST00000417157 DLEC1Q9Y238 1755 aa18.34■□□□□ 0.53
SLC13A3-205ENST00000417157 CCDC30Q5VVM6 783 aa18.33■□□□□ 0.52
SLC13A3-205ENST00000417157 PPP1R42Q7Z4L9 355 aa18.33■□□□□ 0.52
SLC13A3-205ENST00000417157 TSR2Q969E8 191 aaKnown RBP18.33■□□□□ 0.52
SLC13A3-205ENST00000417157 RNF123Q5XPI4 1314 aa18.32■□□□□ 0.52
SLC13A3-205ENST00000417157 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
SLC13A3-205ENST00000417157 FAM177BA6PVY3 158 aa18.32■□□□□ 0.52
SLC13A3-205ENST00000417157 ELL2O00472 640 aaPredicted RBP18.32■□□□□ 0.52
SLC13A3-205ENST00000417157 GPTP24298 496 aa18.32■□□□□ 0.52
SLC13A3-205ENST00000417157 ARHGAP27Q6ZUM4 889 aa18.32■□□□□ 0.52
SLC13A3-205ENST00000417157 ZNF34Q8IZ26 560 aa18.32■□□□□ 0.52
SLC13A3-205ENST00000417157 CCDC24Q8N4L8 307 aa18.32■□□□□ 0.52
SLC13A3-205ENST00000417157 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
SLC13A3-205ENST00000417157 ARFGEF1Q9Y6D6 1849 aa18.32■□□□□ 0.52
SLC13A3-205ENST00000417157 RIC1Q4ADV7 1423 aa18.32■□□□□ 0.52
SLC13A3-205ENST00000417157 UBN2Q6ZU65 1347 aa18.31■□□□□ 0.52
SLC13A3-205ENST00000417157 NUP98P52948 1817 aa18.31■□□□□ 0.52
SLC13A3-205ENST00000417157 STYK1Q6J9G0 422 aa18.31■□□□□ 0.52
SLC13A3-205ENST00000417157 C8orf58Q8NAV2 365 aa18.31■□□□□ 0.52
SLC13A3-205ENST00000417157 PLBD2Q8NHP8 589 aa18.31■□□□□ 0.52
SLC13A3-205ENST00000417157 CNKSR1Q969H4 720 aa18.31■□□□□ 0.52
SLC13A3-205ENST00000417157 ZNF622Q969S3 477 aaKnown RBP eCLIP18.31■□□□□ 0.52
SLC13A3-205ENST00000417157 MASTLQ96GX5 879 aa18.31■□□□□ 0.52
SLC13A3-205ENST00000417157 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
SLC13A3-205ENST00000417157 ANKRD31Q8N7Z5 1873 aa18.31■□□□□ 0.52
SLC13A3-205ENST00000417157 FANCIQ9NVI1 1328 aa18.3■□□□□ 0.52
SLC13A3-205ENST00000417157 SRGNP10124 158 aa18.3■□□□□ 0.52
SLC13A3-205ENST00000417157 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
SLC13A3-205ENST00000417157 ANKRD13DQ6ZTN6 518 aa18.3■□□□□ 0.52
SLC13A3-205ENST00000417157 STK31Q9BXU1 1019 aa18.3■□□□□ 0.52
SLC13A3-205ENST00000417157 KLRG2A4D1S0 409 aaPredicted RBP18.29■□□□□ 0.52
SLC13A3-205ENST00000417157 NPR1P16066 1061 aa18.29■□□□□ 0.52
SLC13A3-205ENST00000417157 TWISTNBQ3B726 338 aaPredicted RBP18.29■□□□□ 0.52
SLC13A3-205ENST00000417157 ZNF784Q8NCA9 323 aaPredicted RBP18.29■□□□□ 0.52
SLC13A3-205ENST00000417157 UTP14AQ9BVJ6 771 aaKnown RBP18.29■□□□□ 0.52
SLC13A3-205ENST00000417157 NTSR2O95665 410 aa18.28■□□□□ 0.52
SLC13A3-205ENST00000417157 DDX58O95786 925 aaKnown RBP18.28■□□□□ 0.52
SLC13A3-205ENST00000417157 TCIRG1Q13488 830 aa18.28■□□□□ 0.52
SLC13A3-205ENST00000417157 SOGA3Q5TF21 947 aa18.28■□□□□ 0.52
SLC13A3-205ENST00000417157 SUSD4Q5VX71 490 aa18.28■□□□□ 0.52
SLC13A3-205ENST00000417157 COL11A2P13942 1736 aaPredicted RBP18.28■□□□□ 0.52
SLC13A3-205ENST00000417157 UTRNP46939 3433 aa18.27■□□□□ 0.52
SLC13A3-205ENST00000417157 NUTM1Q86Y26 1132 aa18.27■□□□□ 0.52
SLC13A3-205ENST00000417157 ADCY9O60503 1353 aa18.27■□□□□ 0.51
SLC13A3-205ENST00000417157 ABCC12Q96J65 1359 aa18.27■□□□□ 0.51
SLC13A3-205ENST00000417157 ALDH1B1P30837 517 aa18.26■□□□□ 0.51
SLC13A3-205ENST00000417157 ERFEQ4G0M1 354 aa18.26■□□□□ 0.51
SLC13A3-205ENST00000417157 DIEXFQ68CQ4 756 aaKnown RBP18.26■□□□□ 0.51
SLC13A3-205ENST00000417157 RIC3Q7Z5B4 369 aa18.26■□□□□ 0.51
SLC13A3-205ENST00000417157 TSPYL6Q8N831 410 aa18.26■□□□□ 0.51
SLC13A3-205ENST00000417157 ANKRD36CQ5JPF3 1778 aa18.26■□□□□ 0.51
SLC13A3-205ENST00000417157 PRPF40BQ6NWY9 871 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms