RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 FAM83GA6ND36 823 aa13.92□□□□□ -0.18
UBR4-205ENST00000417040 GOLGA8AA7E2F4 631 aa13.92□□□□□ -0.18
UBR4-205ENST00000417040 UVSSAQ2YD98 709 aa13.92□□□□□ -0.18
UBR4-205ENST00000417040 DNAAF4Q8WXU2 420 aa13.92□□□□□ -0.18
UBR4-205ENST00000417040 TSG101Q99816 390 aa13.92□□□□□ -0.18
UBR4-205ENST00000417040 RANBP6O60518 1105 aaKnown RBP13.92□□□□□ -0.18
UBR4-205ENST00000417040 ZSCAN22P10073 491 aaPredicted RBP13.92□□□□□ -0.18
UBR4-205ENST00000417040 PLCD3Q8N3E9 789 aa13.92□□□□□ -0.18
UBR4-205ENST00000417040 NEMFO60524 1076 aa13.92□□□□□ -0.18
UBR4-205ENST00000417040 CCDC91Q7Z6B0 441 aa13.92□□□□□ -0.18
UBR4-205ENST00000417040 RRAGDQ9NQL2 400 aaPredicted RBP13.92□□□□□ -0.18
UBR4-205ENST00000417040 ZNF213O14771 459 aa13.91□□□□□ -0.18
UBR4-205ENST00000417040 USO1O60763 962 aaKnown RBP13.91□□□□□ -0.18
UBR4-205ENST00000417040 NF2P35240 595 aa13.91□□□□□ -0.18
UBR4-205ENST00000417040 MTIF2P46199 727 aaKnown RBP13.91□□□□□ -0.18
UBR4-205ENST00000417040 SEC24BO95487 1268 aa13.91□□□□□ -0.18
UBR4-205ENST00000417040 TRMT1LQ7Z2T5 733 aaKnown RBP13.91□□□□□ -0.18
UBR4-205ENST00000417040 WAPLQ7Z5K2 1190 aa13.91□□□□□ -0.18
UBR4-205ENST00000417040 PCDHB15Q9Y5E8 787 aa13.91□□□□□ -0.18
UBR4-205ENST00000417040 EMILIN1Q9Y6C2 1016 aa13.91□□□□□ -0.18
UBR4-205ENST00000417040 AOPEPQ8N6M6 819 aa13.91□□□□□ -0.18
UBR4-205ENST00000417040 UBASH3AP57075 661 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 SUPT6HQ7KZ85 1726 aaKnown RBP13.9□□□□□ -0.18
UBR4-205ENST00000417040 MYO1BO43795 1136 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 SDSP20132 328 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 PTGS1P23219 599 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 NUCB1Q02818 461 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 DNM1Q05193 864 aaKnown RBP13.9□□□□□ -0.18
UBR4-205ENST00000417040 BMP2KLQ5H9B9 411 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 CCDC94Q9BW85 323 aaPredicted RBP13.9□□□□□ -0.18
UBR4-205ENST00000417040 NLRP5P59047 1200 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 MICALL1Q8N3F8 863 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 NAPBQ9H115 298 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 MMRN2Q9H8L6 949 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 PLEKHH2Q8IVE3 1493 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 CCDC175P0C221 793 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 NME9Q86XW9 330 aa13.9□□□□□ -0.18
UBR4-205ENST00000417040 ZNF692Q9BU19 519 aaPredicted RBP13.9□□□□□ -0.18
UBR4-205ENST00000417040 GOLIM4O00461 696 aa13.89□□□□□ -0.19
UBR4-205ENST00000417040 IFIT3O14879 490 aaKnown RBP13.89□□□□□ -0.19
UBR4-205ENST00000417040 NOP2P46087 812 aaKnown RBP13.89□□□□□ -0.19
UBR4-205ENST00000417040 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
UBR4-205ENST00000417040 GCOM1H8Y6P7 765 aaPredicted RBP13.89□□□□□ -0.19
UBR4-205ENST00000417040 HSF2BPO75031 334 aa13.89□□□□□ -0.19
UBR4-205ENST00000417040 MYZAPP0CAP1 466 aa13.89□□□□□ -0.19
UBR4-205ENST00000417040 AFMP43652 599 aa13.89□□□□□ -0.19
UBR4-205ENST00000417040 CCDC150Q8NCX0 1101 aa13.89□□□□□ -0.19
UBR4-205ENST00000417040 SEC63Q9UGP8 760 aaKnown RBP13.89□□□□□ -0.19
UBR4-205ENST00000417040 USP16Q9Y5T5 823 aa13.89□□□□□ -0.19
UBR4-205ENST00000417040 VPS18Q9P253 973 aa13.89□□□□□ -0.19
UBR4-205ENST00000417040 CCDC171Q6TFL3 1326 aa13.89□□□□□ -0.19
UBR4-205ENST00000417040 FBLN1P23142 703 aa13.89□□□□□ -0.19
UBR4-205ENST00000417040 SNRKQ9NRH2 765 aa13.89□□□□□ -0.19
UBR4-205ENST00000417040 ZKSCAN5Q9Y2L8 839 aa13.89□□□□□ -0.19
UBR4-205ENST00000417040 POLA1P09884 1462 aaPredicted RBP13.88□□□□□ -0.19
UBR4-205ENST00000417040 ALS2CR12Q96Q35 445 aa13.88□□□□□ -0.19
UBR4-205ENST00000417040 CCDC96Q2M329 555 aa13.88□□□□□ -0.19
UBR4-205ENST00000417040 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.88□□□□□ -0.19
UBR4-205ENST00000417040 PTCD1O75127 700 aaKnown RBP13.88□□□□□ -0.19
UBR4-205ENST00000417040 GTF3C6Q969F1 213 aa13.88□□□□□ -0.19
UBR4-205ENST00000417040 CAPZA3Q96KX2 299 aa13.88□□□□□ -0.19
UBR4-205ENST00000417040 PUF60Q9UHX1 559 aaKnown RBP13.88□□□□□ -0.19
UBR4-205ENST00000417040 DNAJC21Q5F1R6 531 aaKnown RBP13.88□□□□□ -0.19
UBR4-205ENST00000417040 MPRIPQ6WCQ1 1025 aa13.88□□□□□ -0.19
UBR4-205ENST00000417040 ZGPATQ8N5A5 531 aaKnown RBP13.88□□□□□ -0.19
UBR4-205ENST00000417040 PHACTR2O75167 634 aa13.88□□□□□ -0.19
UBR4-205ENST00000417040 SMC1AQ14683 1233 aaKnown RBP13.88□□□□□ -0.19
UBR4-205ENST00000417040 KARSQ15046 597 aaKnown RBP13.88□□□□□ -0.19
UBR4-205ENST00000417040 SLC26A6Q9BXS9 759 aa13.88□□□□□ -0.19
UBR4-205ENST00000417040 NEBLO76041 1014 aa13.87□□□□□ -0.19
UBR4-205ENST00000417040 ZC3H6P61129 1189 aaKnown RBP13.87□□□□□ -0.19
UBR4-205ENST00000417040 LARP1Q6PKG0 1096 aaKnown RBP13.87□□□□□ -0.19
UBR4-205ENST00000417040 MICU3Q86XE3 530 aa13.87□□□□□ -0.19
UBR4-205ENST00000417040 CEP63Q96MT8 703 aa13.87□□□□□ -0.19
UBR4-205ENST00000417040 EVI5LQ96CN4 794 aa13.87□□□□□ -0.19
UBR4-205ENST00000417040 NEK1Q96PY6 1258 aa13.87□□□□□ -0.19
UBR4-205ENST00000417040 C10orf67Q8IYJ2 551 aa13.87□□□□□ -0.19
UBR4-205ENST00000417040 MKNK2Q9HBH9 465 aa13.87□□□□□ -0.19
UBR4-205ENST00000417040 MBIPQ9NS73 344 aa13.87□□□□□ -0.19
UBR4-205ENST00000417040 DACT1Q9NYF0 836 aa13.87□□□□□ -0.19
UBR4-205ENST00000417040 NAIPQ13075 1403 aa13.87□□□□□ -0.19
UBR4-205ENST00000417040 PDIA4P13667 645 aaKnown RBP13.87□□□□□ -0.19
UBR4-205ENST00000417040 PAIP2Q9BPZ3 127 aaKnown RBP13.87□□□□□ -0.19
UBR4-205ENST00000417040 PPP1R1BQ9UD71 204 aaPredicted RBP13.87□□□□□ -0.19
UBR4-205ENST00000417040 MAP3K2Q9Y2U5 619 aa13.87□□□□□ -0.19
UBR4-205ENST00000417040 MARCKSP29966 332 aaPredicted RBP13.86□□□□□ -0.19
UBR4-205ENST00000417040 IGHMBP2P38935 993 aaKnown RBP13.86□□□□□ -0.19
UBR4-205ENST00000417040 C17orf53Q8N3J3 647 aaPredicted RBP13.86□□□□□ -0.19
UBR4-205ENST00000417040 HMGB1P09429 215 aaKnown RBP13.86□□□□□ -0.19
UBR4-205ENST00000417040 NUDT16Q96DE0 195 aaKnown RBP13.86□□□□□ -0.19
UBR4-205ENST00000417040 CDK13Q14004 1512 aaKnown RBP13.86□□□□□ -0.19
UBR4-205ENST00000417040 DISP3Q9P2K9 1392 aa13.86□□□□□ -0.19
UBR4-205ENST00000417040 VAT1LQ9HCJ6 419 aa13.86□□□□□ -0.19
UBR4-205ENST00000417040 ORC3Q9UBD5 711 aaPredicted RBP13.86□□□□□ -0.19
UBR4-205ENST00000417040 SYT1P21579 422 aa13.86□□□□□ -0.19
UBR4-205ENST00000417040 CAPN2P17655 700 aa13.85□□□□□ -0.19
UBR4-205ENST00000417040 SYT10Q6XYQ8 523 aa13.85□□□□□ -0.19
UBR4-205ENST00000417040 PPP1R12BO60237 982 aaPredicted RBP13.85□□□□□ -0.19
UBR4-205ENST00000417040 RHOXF2BP0C7M4 288 aa13.85□□□□□ -0.19
UBR4-205ENST00000417040 ANAPC15P60006 121 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms