RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 JAKMIP3Q5VZ66 844 aa16.23■□□□□ 0.19
CLTCL1-201ENST00000412649 KRBA2Q6ZNG9 492 aa16.23■□□□□ 0.19
CLTCL1-201ENST00000412649 ARHGEF5Q12774 1597 aa16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 FAM193AP78312 1265 aa16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 RUFY1Q96T51 708 aa16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 FLIIQ13045 1269 aa16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 KIF24Q5T7B8 1368 aa16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 TOP1P11387 765 aaKnown RBP16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 AXDND1Q5T1B0 1012 aaPredicted RBP16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 PLEKHF1Q96S99 279 aa16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 GBP3Q9H0R5 595 aa16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 RGS12O14924 1447 aa16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 IPO7O95373 1038 aaKnown RBP16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 IVLP07476 585 aa16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 NEXNQ0ZGT2 675 aa16.22■□□□□ 0.19
CLTCL1-201ENST00000412649 RDXP35241 583 aaKnown RBP16.21■□□□□ 0.19
CLTCL1-201ENST00000412649 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
CLTCL1-201ENST00000412649 ATP8B2P98198 1209 aa16.21■□□□□ 0.19
CLTCL1-201ENST00000412649 VPS53Q5VIR6 699 aa16.21■□□□□ 0.19
CLTCL1-201ENST00000412649 AOPEPQ8N6M6 819 aa16.21■□□□□ 0.19
CLTCL1-201ENST00000412649 A0A1W2PP64 1363 aa16.21■□□□□ 0.19
CLTCL1-201ENST00000412649 TERF2Q15554 542 aa16.21■□□□□ 0.19
CLTCL1-201ENST00000412649 ANKRD20A12PQ8NF67 263 aa16.21■□□□□ 0.19
CLTCL1-201ENST00000412649 DDX41Q9UJV9 622 aaKnown RBP16.21■□□□□ 0.19
CLTCL1-201ENST00000412649 TTC37Q6PGP7 1564 aa16.21■□□□□ 0.19
CLTCL1-201ENST00000412649 ZNF710Q8N1W2 664 aa16.21■□□□□ 0.19
CLTCL1-201ENST00000412649 ZSCAN16Q9H4T2 348 aaPredicted RBP16.21■□□□□ 0.19
CLTCL1-201ENST00000412649 CLSTN2Q9H4D0 955 aa16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 RTEL1-TNFRSF6BF6WH68 1400 aa16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 DDX58O95786 925 aaKnown RBP16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 CPA1P15085 419 aa16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 NME9Q86XW9 330 aa16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 JMYQ8N9B5 988 aa16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 RHPN1Q8TCX5 695 aa16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 POLKQ9UBT6 870 aa16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 SNX14Q9Y5W7 946 aa16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 ADGRL1O94910 1474 aa16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 KRT24Q2M2I5 525 aa16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 GPATCH11Q8N954 259 aa16.2■□□□□ 0.18
CLTCL1-201ENST00000412649 HSPA4P34932 840 aa16.19■□□□□ 0.18
CLTCL1-201ENST00000412649 GNG11P61952 73 aa16.19■□□□□ 0.18
CLTCL1-201ENST00000412649 GOLGA6L9A6NEM1 432 aa16.19■□□□□ 0.18
CLTCL1-201ENST00000412649 RAD50Q92878 1312 aa16.19■□□□□ 0.18
CLTCL1-201ENST00000412649 DHX16O60231 1041 aaKnown RBP16.19■□□□□ 0.18
CLTCL1-201ENST00000412649 PPP1R42Q7Z4L9 355 aa16.19■□□□□ 0.18
CLTCL1-201ENST00000412649 PPFIBP1Q86W92 1011 aa16.19■□□□□ 0.18
CLTCL1-201ENST00000412649 ECHDC1Q9NTX5 307 aa16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 USP16Q9Y5T5 823 aa16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 FAM173BQ6P4H8 233 aa16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 SIL1Q9H173 461 aa16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 CTNNA3Q9UI47 895 aa16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 SSH2Q76I76 1423 aa16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 BIN1O00499 593 aa16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 MLECQ14165 292 aa16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 LRRFIP1Q32MZ4 808 aaKnown RBP16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 SMARCE1Q969G3 411 aa16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 TCEANC2Q96MN5 208 aa16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 TMX1Q9H3N1 280 aa16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 EVI5LQ96CN4 794 aa16.18■□□□□ 0.18
CLTCL1-201ENST00000412649 SLC3A2P08195 630 aaKnown RBP16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 NRBP1Q9UHY1 535 aa16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 ZFYVE9O95405 1425 aa16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 CAPN2P17655 700 aa16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 TAF7LQ5H9L4 462 aa16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 CAGE1Q8TC20 777 aa16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 RBM8AQ9Y5S9 174 aaKnown RBP16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 EPB41L2O43491 1005 aaKnown RBP16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 PBRM1Q86U86 1689 aa16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 LAMC1P11047 1609 aa16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 ABCC10Q5T3U5 1492 aa16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 POTEB2H3BUK9 544 aa16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 FILIP1LQ4L180 1135 aa16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 RALYLQ86SE5 291 aaKnown RBP16.17■□□□□ 0.18
CLTCL1-201ENST00000412649 ERCC6LQ2NKX8 1250 aa16.16■□□□□ 0.18
CLTCL1-201ENST00000412649 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
CLTCL1-201ENST00000412649 LIG1P18858 919 aa16.16■□□□□ 0.18
CLTCL1-201ENST00000412649 LMOD2Q6P5Q4 547 aa16.16■□□□□ 0.18
CLTCL1-201ENST00000412649 TMEM87AQ8NBN3 555 aa16.16■□□□□ 0.18
CLTCL1-201ENST00000412649 ANKRD7Q92527 254 aa16.16■□□□□ 0.18
CLTCL1-201ENST00000412649 FAM107BQ9H098 131 aa16.16■□□□□ 0.18
CLTCL1-201ENST00000412649 KIAA0754O94854 1291 aa16.16■□□□□ 0.18
CLTCL1-201ENST00000412649 TRDNQ13061 729 aa16.16■□□□□ 0.18
CLTCL1-201ENST00000412649 TTC31Q49AM3 519 aaPredicted RBP16.16■□□□□ 0.18
CLTCL1-201ENST00000412649 SLC52A1Q9NWF4 448 aa16.16■□□□□ 0.18
CLTCL1-201ENST00000412649 RSPH14Q9UHP6 348 aa16.16■□□□□ 0.18
CLTCL1-201ENST00000412649 GUCY1B3Q02153 619 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 MCM6Q14566 821 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 DACH1Q9UI36 760 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 SGSM2O43147 1006 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 KIF5CO60282 957 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 KIF4BQ2VIQ3 1234 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 RUFY3Q7L099 469 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 ZSWIM4Q9H7M6 989 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 DTNBO60941 627 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 EVCP57679 992 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 LRRC8AQ8IWT6 810 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 MTMR6Q9Y217 621 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 RTL1A6NKG5 1358 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 BRF1Q92994 677 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms