RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 HDGFL1Q5TGJ6 251 aa23.68■■□□□ 1.38
RFC4-203ENST00000411792 WWC1Q8IX03 1113 aa23.68■■□□□ 1.38
RFC4-203ENST00000411792 DUSP27Q5VZP5 1158 aa23.67■■□□□ 1.38
RFC4-203ENST00000411792 SALL2Q9Y467 1007 aaPredicted RBP23.67■■□□□ 1.38
RFC4-203ENST00000411792 GOLGB1Q14789 3259 aaKnown RBP23.66■■□□□ 1.38
RFC4-203ENST00000411792 MAP3K15Q6ZN16 1313 aa23.66■■□□□ 1.38
RFC4-203ENST00000411792 ERVV-1B6SEH8 477 aa23.66■■□□□ 1.38
RFC4-203ENST00000411792 CNBD1Q8NA66 436 aa23.66■■□□□ 1.38
RFC4-203ENST00000411792 NIP7Q9Y221 180 aaKnown RBP eCLIP23.66■■□□□ 1.38
RFC4-203ENST00000411792 BCORQ6W2J9 1755 aa23.65■■□□□ 1.38
RFC4-203ENST00000411792 ST5P78524 1137 aa23.65■■□□□ 1.38
RFC4-203ENST00000411792 PIM2Q9P1W9 311 aa23.65■■□□□ 1.38
RFC4-203ENST00000411792 KIAA1551Q9HCM1 1747 aa23.64■■□□□ 1.38
RFC4-203ENST00000411792 CHRNA5P30532 468 aa23.64■■□□□ 1.37
RFC4-203ENST00000411792 TTLL7Q6ZT98 887 aa23.64■■□□□ 1.37
RFC4-203ENST00000411792 NBPF5PQ86XG9 351 aaPredicted RBP23.64■■□□□ 1.37
RFC4-203ENST00000411792 DDX21Q9NR30 783 aaKnown RBP eCLIP23.64■■□□□ 1.37
RFC4-203ENST00000411792 AFDNP55196 1824 aaKnown RBP23.63■■□□□ 1.37
RFC4-203ENST00000411792 CHMP4AQ9BY43 222 aa23.63■■□□□ 1.37
RFC4-203ENST00000411792 ZBTB3Q9H5J0 574 aa23.63■■□□□ 1.37
RFC4-203ENST00000411792 IL16Q14005 1332 aa23.62■■□□□ 1.37
RFC4-203ENST00000411792 ANXA1P04083 346 aa23.62■■□□□ 1.37
RFC4-203ENST00000411792 PDIA6Q15084 440 aa23.62■■□□□ 1.37
RFC4-203ENST00000411792 HLFQ16534 295 aa23.62■■□□□ 1.37
RFC4-203ENST00000411792 PROSER3Q2NL68 480 aa23.62■■□□□ 1.37
RFC4-203ENST00000411792 PRR5LQ6MZQ0 368 aa23.62■■□□□ 1.37
RFC4-203ENST00000411792 CHPF2Q9P2E5 772 aa23.62■■□□□ 1.37
RFC4-203ENST00000411792 CCER2I3L3R5 266 aa23.61■■□□□ 1.37
RFC4-203ENST00000411792 AIMP1Q12904 312 aaKnown RBP23.61■■□□□ 1.37
RFC4-203ENST00000411792 DALRD3Q5D0E6 543 aaKnown RBP23.61■■□□□ 1.37
RFC4-203ENST00000411792 ARHGAP27Q6ZUM4 889 aa23.61■■□□□ 1.37
RFC4-203ENST00000411792 DBF4Q9UBU7 674 aaPredicted RBP23.61■■□□□ 1.37
RFC4-203ENST00000411792 PDZRN3Q9UPQ7 1066 aa23.61■■□□□ 1.37
RFC4-203ENST00000411792 NRXN2Q9P2S2 1712 aa23.61■■□□□ 1.37
RFC4-203ENST00000411792 H0YIN7 160 aa23.6■■□□□ 1.37
RFC4-203ENST00000411792 ELL2O00472 640 aaPredicted RBP23.6■■□□□ 1.37
RFC4-203ENST00000411792 KCNA3P22001 575 aa23.6■■□□□ 1.37
RFC4-203ENST00000411792 PDE6BP35913 854 aa23.6■■□□□ 1.37
RFC4-203ENST00000411792 TPTE2Q6XPS3 522 aa23.6■■□□□ 1.37
RFC4-203ENST00000411792 WDR63Q8IWG1 891 aa23.6■■□□□ 1.37
RFC4-203ENST00000411792 GTF2E1P29083 439 aaPredicted RBP23.59■■□□□ 1.37
RFC4-203ENST00000411792 COPS6Q7L5N1 327 aa23.59■■□□□ 1.37
RFC4-203ENST00000411792 C2CD5Q86YS7 1000 aa23.59■■□□□ 1.37
RFC4-203ENST00000411792 XAGE3Q8WTP9 111 aa23.59■■□□□ 1.37
RFC4-203ENST00000411792 TSR2Q969E8 191 aaKnown RBP23.59■■□□□ 1.37
RFC4-203ENST00000411792 BRIP1Q9BX63 1249 aa23.59■■□□□ 1.37
RFC4-203ENST00000411792 FAM177BA6PVY3 158 aa23.58■■□□□ 1.37
RFC4-203ENST00000411792 DIEXFQ68CQ4 756 aaKnown RBP23.58■■□□□ 1.37
RFC4-203ENST00000411792 LRP10Q7Z4F1 713 aa23.58■■□□□ 1.37
RFC4-203ENST00000411792 CCDC24Q8N4L8 307 aa23.58■■□□□ 1.37
RFC4-203ENST00000411792 NYXQ9GZU5 481 aa23.58■■□□□ 1.37
RFC4-203ENST00000411792 ATP10DQ9P241 1426 aa23.58■■□□□ 1.36
RFC4-203ENST00000411792 GIGYF2Q6Y7W6 1299 aaKnown RBP23.57■■□□□ 1.36
RFC4-203ENST00000411792 C8orf58Q8NAV2 365 aa23.57■■□□□ 1.36
RFC4-203ENST00000411792 HYPKQ9NX55 129 aa23.57■■□□□ 1.36
RFC4-203ENST00000411792 GPTP24298 496 aa23.56■■□□□ 1.36
RFC4-203ENST00000411792 HSP90AB3PQ58FF7 597 aa23.56■■□□□ 1.36
RFC4-203ENST00000411792 BRCA1P38398 1863 aaKnown RBP23.56■■□□□ 1.36
RFC4-203ENST00000411792 CCDC30Q5VVM6 783 aa23.55■■□□□ 1.36
RFC4-203ENST00000411792 PARP10Q53GL7 1025 aa23.53■■□□□ 1.36
RFC4-203ENST00000411792 PPP1R42Q7Z4L9 355 aa23.53■■□□□ 1.36
RFC4-203ENST00000411792 TTLL6Q8N841 843 aa23.53■■□□□ 1.36
RFC4-203ENST00000411792 ZNF526Q8TF50 670 aaPredicted RBP23.53■■□□□ 1.36
RFC4-203ENST00000411792 ZNF622Q969S3 477 aaKnown RBP eCLIP23.53■■□□□ 1.364e-10■□□□□ 8.7
RFC4-203ENST00000411792 FANCIQ9NVI1 1328 aa23.53■■□□□ 1.36
RFC4-203ENST00000411792 GOLGA2Q08379 1002 aa23.52■■□□□ 1.36
RFC4-203ENST00000411792 TWISTNBQ3B726 338 aaPredicted RBP23.52■■□□□ 1.36
RFC4-203ENST00000411792 PLBD2Q8NHP8 589 aa23.52■■□□□ 1.36
RFC4-203ENST00000411792 STK31Q9BXU1 1019 aa23.52■■□□□ 1.36
RFC4-203ENST00000411792 MYH16Q9H6N6 1097 aa23.52■■□□□ 1.36
RFC4-203ENST00000411792 ZNF34Q8IZ26 560 aa23.51■■□□□ 1.35
RFC4-203ENST00000411792 TSPYL6Q8N831 410 aa23.51■■□□□ 1.35
RFC4-203ENST00000411792 ARFGEF1Q9Y6D6 1849 aa23.51■■□□□ 1.35
RFC4-203ENST00000411792 IBTKQ9P2D0 1353 aaPredicted RBP23.51■■□□□ 1.35
RFC4-203ENST00000411792 ANKRD13DQ6ZTN6 518 aa23.5■■□□□ 1.35
RFC4-203ENST00000411792 GPBP1L1Q9HC44 474 aaPredicted RBP23.5■■□□□ 1.35
RFC4-203ENST00000411792 UBN2Q6ZU65 1347 aa23.5■■□□□ 1.35
RFC4-203ENST00000411792 SUSD4Q5VX71 490 aa23.49■■□□□ 1.35
RFC4-203ENST00000411792 NUTM1Q86Y26 1132 aa23.49■■□□□ 1.35
RFC4-203ENST00000411792 CNKSR1Q969H4 720 aa23.49■■□□□ 1.35
RFC4-203ENST00000411792 TCIRG1Q13488 830 aa23.48■■□□□ 1.35
RFC4-203ENST00000411792 STYK1Q6J9G0 422 aa23.48■■□□□ 1.35
RFC4-203ENST00000411792 MASTLQ96GX5 879 aa23.48■■□□□ 1.35
RFC4-203ENST00000411792 UTP14AQ9BVJ6 771 aaKnown RBP23.48■■□□□ 1.35
RFC4-203ENST00000411792 NUP98P52948 1817 aa23.47■■□□□ 1.35
RFC4-203ENST00000411792 DDX58O95786 925 aaKnown RBP23.47■■□□□ 1.35
RFC4-203ENST00000411792 SRGNP10124 158 aa23.47■■□□□ 1.35
RFC4-203ENST00000411792 RIC3Q7Z5B4 369 aa23.47■■□□□ 1.35
RFC4-203ENST00000411792 ANKRD31Q8N7Z5 1873 aa23.47■■□□□ 1.35
RFC4-203ENST00000411792 ADCY9O60503 1353 aa23.46■■□□□ 1.35
RFC4-203ENST00000411792 ERFEQ4G0M1 354 aa23.46■■□□□ 1.35
RFC4-203ENST00000411792 ZNF219Q9P2Y4 722 aaPredicted RBP23.46■■□□□ 1.35
RFC4-203ENST00000411792 DLEC1Q9Y238 1755 aa23.45■■□□□ 1.34
RFC4-203ENST00000411792 RNF123Q5XPI4 1314 aa23.45■■□□□ 1.34
RFC4-203ENST00000411792 NTSR2O95665 410 aa23.45■■□□□ 1.34
RFC4-203ENST00000411792 NPR1P16066 1061 aa23.45■■□□□ 1.34
RFC4-203ENST00000411792 C9orf131Q5VYM1 1079 aa23.45■■□□□ 1.34
RFC4-203ENST00000411792 PHAXQ9H814 394 aaKnown RBP23.45■■□□□ 1.34
RFC4-203ENST00000411792 ABCC12Q96J65 1359 aa23.44■■□□□ 1.34
RFC4-203ENST00000411792 EXOSC9Q06265 439 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms