RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 CRTC2Q53ET0 693 aaPredicted RBP4.41□□□□□ -1.7
RNU2-54P-201ENST00000410299 KANK4Q5T7N3 995 aaPredicted RBP4.41□□□□□ -1.7
RNU2-54P-201ENST00000410299 SAMD5Q5TGI4 173 aa4.41□□□□□ -1.7
RNU2-54P-201ENST00000410299 SLCO4C1Q6ZQN7 724 aa4.41□□□□□ -1.7
RNU2-54P-201ENST00000410299 PODNQ7Z5L7 613 aa4.41□□□□□ -1.7
RNU2-54P-201ENST00000410299 BEND7Q8N7W2 519 aaPredicted RBP4.41□□□□□ -1.7
RNU2-54P-201ENST00000410299 GOLGA6L1Q8N7Z2 621 aa4.41□□□□□ -1.7
RNU2-54P-201ENST00000410299 GAS2L2Q8NHY3 880 aa4.41□□□□□ -1.7
RNU2-54P-201ENST00000410299 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
RNU2-54P-201ENST00000410299 KLF15Q9UIH9 416 aa4.41□□□□□ -1.7
RNU2-54P-201ENST00000410299 PHF20L1A8MW92 1017 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 EFSO43281 561 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 ARAFP10398 606 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 EPXP11678 715 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 AMPD1P23109 780 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 SEC13P55735 322 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 PCBP4P57723 403 aaKnown RBP4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 DPYDQ12882 1025 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 PTK7Q13308 1070 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 LARP1Q6PKG0 1096 aaKnown RBP4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 RHPN1Q8TCX5 695 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 CHMP7Q8WUX9 453 aaPredicted RBP4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 SCG3Q8WXD2 468 aaKnown RBP4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 HSH2DQ96JZ2 352 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 PSMG3-AS1Q96PY0 264 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 HINFPQ9BQA5 517 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 PHACTR1Q9C0D0 580 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 RRAGCQ9HB90 399 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 NEUROD4Q9HD90 331 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 MARK1Q9P0L2 795 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 ATAD2Q6PL18 1390 aa4.4□□□□□ -1.71
RNU2-54P-201ENST00000410299 HOXB4P17483 251 aaPredicted RBP4.39□□□□□ -1.71
RNU2-54P-201ENST00000410299 ADH6P28332 368 aa4.39□□□□□ -1.71
RNU2-54P-201ENST00000410299 HIRAP54198 1017 aaPredicted RBP4.39□□□□□ -1.71
RNU2-54P-201ENST00000410299 CFAP70Q5T0N1 1121 aa4.39□□□□□ -1.71
RNU2-54P-201ENST00000410299 FAM182BQ5T319 152 aa4.39□□□□□ -1.71
RNU2-54P-201ENST00000410299 ZNF280CQ8ND82 737 aa4.39□□□□□ -1.71
RNU2-54P-201ENST00000410299 DCAF5Q96JK2 942 aa4.39□□□□□ -1.71
RNU2-54P-201ENST00000410299 BTBD6Q96KE9 485 aa4.39□□□□□ -1.71
RNU2-54P-201ENST00000410299 VRTNQ9H8Y1 702 aa4.39□□□□□ -1.71
RNU2-54P-201ENST00000410299 PRR12Q9ULL5 1215 aa4.39□□□□□ -1.71
RNU2-54P-201ENST00000410299 CHMP3Q9Y3E7 222 aa4.39□□□□□ -1.71
RNU2-54P-201ENST00000410299 USP17L15C9J2P7 530 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 USP17L10C9JJH3 530 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 USP17L13C9JLJ4 530 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 USP17L12C9JPN9 530 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 USP17L11C9JVI0 530 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 USP17L21D6R901 530 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 USP17L18D6R9N7 530 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 USP17L22D6RA61 530 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 USP17L17D6RBQ6 530 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 USP17L19D6RCP7 530 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 USP17L20D6RJB6 530 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 USP17L24Q0WX57 530 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 SFSWAPQ12872 951 aaKnown RBP4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 LAMC2Q13753 1193 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 CDCA8Q53HL2 280 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 ZNF468Q5VIY5 522 aaPredicted RBP4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 C1orf53Q5VUE5 145 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 POTEAQ6S8J7 498 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 FCHSD1Q86WN1 690 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 ANKMY2Q8IV38 441 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 ALDH16A1Q8IZ83 802 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 NGLY1Q96IV0 654 aa4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 C2orf49Q9BVC5 232 aaPredicted RBP4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 GPC6Q9Y625 555 aaPredicted RBP4.38□□□□□ -1.71
RNU2-54P-201ENST00000410299 FAM196BA6NMK8 535 aa4.37□□□□□ -1.71
RNU2-54P-201ENST00000410299 RFX1P22670 979 aa4.37□□□□□ -1.71
RNU2-54P-201ENST00000410299 SYT9Q86SS6 491 aa4.37□□□□□ -1.71
RNU2-54P-201ENST00000410299 SUSD3Q96L08 255 aa4.37□□□□□ -1.71
RNU2-54P-201ENST00000410299 CEP63Q96MT8 703 aa4.37□□□□□ -1.71
RNU2-54P-201ENST00000410299 ARXQ96QS3 562 aa4.37□□□□□ -1.71
RNU2-54P-201ENST00000410299 SLC30A3Q99726 388 aa4.37□□□□□ -1.71
RNU2-54P-201ENST00000410299 MKL2Q9ULH7 1088 aa4.37□□□□□ -1.71
RNU2-54P-201ENST00000410299 ITGB2P05107 769 aa4.36□□□□□ -1.71
RNU2-54P-201ENST00000410299 COL8A1P27658 744 aa4.36□□□□□ -1.71
RNU2-54P-201ENST00000410299 PLA2G4EQ3MJ16 856 aa4.36□□□□□ -1.71
RNU2-54P-201ENST00000410299 LINC00114Q6XXX2 140 aa4.36□□□□□ -1.71
RNU2-54P-201ENST00000410299 CHSY3Q70JA7 882 aa4.36□□□□□ -1.71
RNU2-54P-201ENST00000410299 RAB44Q7Z6P3 723 aaPredicted RBP4.36□□□□□ -1.71
RNU2-54P-201ENST00000410299 STAG2Q8N3U4 1231 aa4.36□□□□□ -1.71
RNU2-54P-201ENST00000410299 SUV39H2Q9H5I1 410 aa4.36□□□□□ -1.71
RNU2-54P-201ENST00000410299 BRD7Q9NPI1 651 aa4.36□□□□□ -1.71
RNU2-54P-201ENST00000410299 AVENQ9NQS1 362 aaPredicted RBP4.36□□□□□ -1.71
RNU2-54P-201ENST00000410299 DGKGP49619 791 aa4.35□□□□□ -1.71
RNU2-54P-201ENST00000410299 TYRO3Q06418 890 aa4.35□□□□□ -1.71
RNU2-54P-201ENST00000410299 SPEM2Q0P670 501 aa4.35□□□□□ -1.71
RNU2-54P-201ENST00000410299 SPOCK3Q9BQ16 436 aa4.35□□□□□ -1.71
RNU2-54P-201ENST00000410299 ANKIB1Q9P2G1 1089 aa4.35□□□□□ -1.71
RNU2-54P-201ENST00000410299 ELOA3CA0A087WX78 387 aaPredicted RBP4.34□□□□□ -1.71
RNU2-54P-201ENST00000410299 KRBA1A5PL33 1030 aa4.34□□□□□ -1.71
RNU2-54P-201ENST00000410299 ELOA3DA6NLF2 546 aaPredicted RBP4.34□□□□□ -1.71
RNU2-54P-201ENST00000410299 K7ELQ4 463 aaPredicted RBP4.34□□□□□ -1.71
RNU2-54P-201ENST00000410299 GNB5O14775 395 aa4.34□□□□□ -1.71
RNU2-54P-201ENST00000410299 IGFBP4P22692 258 aa4.34□□□□□ -1.71
RNU2-54P-201ENST00000410299 ELOA3BQ3SY89 546 aa4.34□□□□□ -1.71
RNU2-54P-201ENST00000410299 BTLAQ7Z6A9 289 aa4.34□□□□□ -1.71
RNU2-54P-201ENST00000410299 Q8N3U1 123 aa4.34□□□□□ -1.71
RNU2-54P-201ENST00000410299 ELOA3Q8NG57 546 aa4.34□□□□□ -1.71
RNU2-54P-201ENST00000410299 FAM200AQ8TCP9 573 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms