RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 SIPA1L3O60292 1781 aaPredicted RBP3.85□□□□□ -1.79
CUL3-204ENST00000409777 LMO7Q8WWI1 1683 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 CAMTA1Q9Y6Y1 1673 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 KDRP35968 1356 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 MBD3O95983 291 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 PRIM1P49642 420 aaKnown RBP3.85□□□□□ -1.79
CUL3-204ENST00000409777 PKP1Q13835 747 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 DOK7Q18PE1 504 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 ANKRD45Q5TZF3 282 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 SASS6Q6UVJ0 657 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 C3orf67Q6ZVT6 689 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 FNBP4Q8N3X1 1017 aaPredicted RBP3.85□□□□□ -1.79
CUL3-204ENST00000409777 CCDC39Q9UFE4 941 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 STAP2Q9UGK3 403 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 BOLA1Q9Y3E2 137 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 DDX60Q8IY21 1712 aaKnown RBP3.84□□□□□ -1.79
CUL3-204ENST00000409777 PIK3C2AO00443 1686 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 ADGRL3Q9HAR2 1447 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 MSH6P52701 1360 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 CHL1O00533 1208 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 DPYSL4O14531 572 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 SDSP20132 328 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 TNNT2P45379 298 aaPredicted RBP3.84□□□□□ -1.79
CUL3-204ENST00000409777 MCM2P49736 904 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 LMOD3Q0VAK6 560 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 PROSER2Q86WR7 435 aaPredicted RBP3.84□□□□□ -1.79
CUL3-204ENST00000409777 CCDC102AQ96A19 550 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 GGNBP2Q9H3C7 697 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 DDX49Q9Y6V7 483 aaKnown RBP3.84□□□□□ -1.79
CUL3-204ENST00000409777 TSPOAP1O95153 1857 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 MRC1P22897 1456 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 CARNS1A5YM72 827 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 HOXB1P14653 301 aaPredicted RBP3.84□□□□□ -1.79
CUL3-204ENST00000409777 PRKAR2BP31323 418 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 HMGN5P82970 282 aaKnown RBP3.84□□□□□ -1.79
CUL3-204ENST00000409777 PLPP6Q8IY26 295 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 C8orf58Q8NAV2 365 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 MYRIPQ8NFW9 859 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 OXER1Q8TDS5 423 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 FUCA2Q9BTY2 467 aa3.84□□□□□ -1.79
CUL3-204ENST00000409777 DIP2BQ9P265 1576 aa3.84□□□□□ -1.8
CUL3-204ENST00000409777 PTPRUQ92729 1446 aa3.84□□□□□ -1.8
CUL3-204ENST00000409777 SOS1Q07889 1333 aaPredicted RBP3.84□□□□□ -1.8
CUL3-204ENST00000409777 IDI1Q13907 227 aa3.84□□□□□ -1.8
CUL3-204ENST00000409777 TWISTNBQ3B726 338 aaPredicted RBP3.84□□□□□ -1.8
CUL3-204ENST00000409777 FBXW7Q969H0 707 aa3.84□□□□□ -1.8
CUL3-204ENST00000409777 PRIMPOLQ96LW4 560 aa3.84□□□□□ -1.8
CUL3-204ENST00000409777 NSFL1CQ9UNZ2 370 aaKnown RBP3.84□□□□□ -1.8
CUL3-204ENST00000409777 TCHHQ07283 1943 aa3.83□□□□□ -1.8
CUL3-204ENST00000409777 MINK1Q8N4C8 1332 aaPredicted RBP3.83□□□□□ -1.8
CUL3-204ENST00000409777 USP42Q9H9J4 1324 aaKnown RBP3.83□□□□□ -1.8
CUL3-204ENST00000409777 HDGFL2Q7Z4V5 671 aaPredicted RBP3.83□□□□□ -1.8
CUL3-204ENST00000409777 SPNS2Q8IVW8 549 aa3.83□□□□□ -1.8
CUL3-204ENST00000409777 ZNF710Q8N1W2 664 aa3.83□□□□□ -1.8
CUL3-204ENST00000409777 ZGPATQ8N5A5 531 aaKnown RBP3.83□□□□□ -1.8
CUL3-204ENST00000409777 FAM184AQ8NB25 1140 aa3.83□□□□□ -1.8
CUL3-204ENST00000409777 KCNB2Q92953 911 aa3.83□□□□□ -1.8
CUL3-204ENST00000409777 ERC2O15083 957 aa3.83□□□□□ -1.8
CUL3-204ENST00000409777 REC8O95072 547 aa3.83□□□□□ -1.8
CUL3-204ENST00000409777 CDK11BP21127 795 aaKnown RBP3.83□□□□□ -1.8
CUL3-204ENST00000409777 FECHP22830 423 aa3.83□□□□□ -1.8
CUL3-204ENST00000409777 MCTP1Q6DN14 999 aa3.83□□□□□ -1.8
CUL3-204ENST00000409777 CAVIN1Q6NZI2 390 aaKnown RBP3.83□□□□□ -1.8
CUL3-204ENST00000409777 PIBF1Q8WXW3 757 aa3.83□□□□□ -1.8
CUL3-204ENST00000409777 CCDC94Q9BW85 323 aaPredicted RBP3.83□□□□□ -1.8
CUL3-204ENST00000409777 CDK19Q9BWU1 502 aa3.83□□□□□ -1.8
CUL3-204ENST00000409777 CHMP4AQ9BY43 222 aa3.83□□□□□ -1.8
CUL3-204ENST00000409777 JCADQ9P266 1359 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 U2SURPO15042 1029 aaKnown RBP3.82□□□□□ -1.8
CUL3-204ENST00000409777 OSBPP22059 807 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 MSNP26038 577 aaKnown RBP3.82□□□□□ -1.8
CUL3-204ENST00000409777 DMTNQ08495 405 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 FKBP5Q13451 457 aaPredicted RBP3.82□□□□□ -1.8
CUL3-204ENST00000409777 OTUD7AQ8TE49 926 aaPredicted RBP3.82□□□□□ -1.8
CUL3-204ENST00000409777 CCDC97Q96F63 343 aaPredicted RBP3.82□□□□□ -1.8
CUL3-204ENST00000409777 TMX3Q96JJ7 454 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 PRAM1Q96QH2 718 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 LTBP4Q8N2S1 1624 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 UQCRHLA0A096LP55 91 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 C2orf72A6NCS6 295 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 RIMBP2O15034 1052 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 CTIFO43310 598 aaKnown RBP3.82□□□□□ -1.8
CUL3-204ENST00000409777 UQCRHP07919 91 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 ZSCAN20P17040 1043 aaPredicted RBP3.82□□□□□ -1.8
CUL3-204ENST00000409777 PDE1AP54750 535 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 MMRN1Q13201 1228 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 SYCP1Q15431 976 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 AMHR2Q16671 573 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 C16orf71Q8IYS4 520 aaPredicted RBP3.82□□□□□ -1.8
CUL3-204ENST00000409777 ANKRD7Q92527 254 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 TTC14Q96N46 770 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 ESYT1Q9BSJ8 1104 aa3.82□□□□□ -1.8
CUL3-204ENST00000409777 G3V3G9 751 aa3.81□□□□□ -1.8
CUL3-204ENST00000409777 REPIN1Q9BWE0 567 aaKnown RBP3.81□□□□□ -1.8
CUL3-204ENST00000409777 SNRKQ9NRH2 765 aa3.81□□□□□ -1.8
CUL3-204ENST00000409777 RBM27Q9P2N5 1060 aaKnown RBP3.81□□□□□ -1.8
CUL3-204ENST00000409777 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.81□□□□□ -1.8
CUL3-204ENST00000409777 CCDC171Q6TFL3 1326 aa3.81□□□□□ -1.8
CUL3-204ENST00000409777 NCAPD2Q15021 1401 aa3.81□□□□□ -1.8
CUL3-204ENST00000409777 PRPF40AO75400 957 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms