RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 THUMPD2Q9BTF0 503 aaKnown RBP11.88□□□□□ -0.51
SNORD88A-201ENST00000408314 NYXQ9GZU5 481 aa11.88□□□□□ -0.51
SNORD88A-201ENST00000408314 NBPF26B4DH59 902 aa11.87□□□□□ -0.51
SNORD88A-201ENST00000408314 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
SNORD88A-201ENST00000408314 STYK1Q6J9G0 422 aa11.87□□□□□ -0.51
SNORD88A-201ENST00000408314 NBPF10Q6P3W6 841 aaKnown RBP11.87□□□□□ -0.51
SNORD88A-201ENST00000408314 NBPF15Q8N660 670 aa11.87□□□□□ -0.51
SNORD88A-201ENST00000408314 ZNF526Q8TF50 670 aaPredicted RBP11.87□□□□□ -0.51
SNORD88A-201ENST00000408314 NIP7Q9Y221 180 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNORD88A-201ENST00000408314 KDM2BQ8NHM5 1336 aa11.86□□□□□ -0.51
SNORD88A-201ENST00000408314 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
SNORD88A-201ENST00000408314 C9orf131Q5VYM1 1079 aa11.86□□□□□ -0.51
SNORD88A-201ENST00000408314 CCDC146Q8IYE0 955 aa11.86□□□□□ -0.51
SNORD88A-201ENST00000408314 ZNF622Q969S3 477 aaKnown RBP eCLIP11.86□□□□□ -0.51
SNORD88A-201ENST00000408314 RNF181Q9P0P0 153 aa11.86□□□□□ -0.51
SNORD88A-201ENST00000408314 IBTKQ9P2D0 1353 aaPredicted RBP11.86□□□□□ -0.51
SNORD88A-201ENST00000408314 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
SNORD88A-201ENST00000408314 ANKRD31Q8N7Z5 1873 aa11.85□□□□□ -0.51
SNORD88A-201ENST00000408314 SENP3-EIF4A1A0A087X0R7 540 aa11.85□□□□□ -0.51
SNORD88A-201ENST00000408314 HOXB7P09629 217 aa11.85□□□□□ -0.51
SNORD88A-201ENST00000408314 LMNB1P20700 586 aa11.85□□□□□ -0.51
SNORD88A-201ENST00000408314 NEUROD2Q15784 382 aa11.85□□□□□ -0.51
SNORD88A-201ENST00000408314 MASTLQ96GX5 879 aa11.85□□□□□ -0.51
SNORD88A-201ENST00000408314 CHMP4AQ9BY43 222 aa11.85□□□□□ -0.51
SNORD88A-201ENST00000408314 ADAMTS8Q9UP79 889 aa11.85□□□□□ -0.51
SNORD88A-201ENST00000408314 RRP7AQ9Y3A4 280 aaKnown RBP11.85□□□□□ -0.51
SNORD88A-201ENST00000408314 MYL6BP14649 208 aa11.84□□□□□ -0.51
SNORD88A-201ENST00000408314 NPR1P16066 1061 aa11.84□□□□□ -0.51
SNORD88A-201ENST00000408314 RIC1Q4ADV7 1423 aa11.84□□□□□ -0.51
SNORD88A-201ENST00000408314 COL11A2P13942 1736 aaPredicted RBP11.83□□□□□ -0.52
SNORD88A-201ENST00000408314 ARFGEF2Q9Y6D5 1785 aa11.83□□□□□ -0.52
SNORD88A-201ENST00000408314 CHL1O00533 1208 aa11.83□□□□□ -0.52
SNORD88A-201ENST00000408314 SRGNP10124 158 aa11.83□□□□□ -0.52
SNORD88A-201ENST00000408314 PARP10Q53GL7 1025 aa11.83□□□□□ -0.52
SNORD88A-201ENST00000408314 HSP90AB3PQ58FF7 597 aa11.83□□□□□ -0.52
SNORD88A-201ENST00000408314 C16orf71Q8IYS4 520 aaPredicted RBP11.83□□□□□ -0.52
SNORD88A-201ENST00000408314 NGEFQ8N5V2 710 aa11.83□□□□□ -0.52
SNORD88A-201ENST00000408314 RNF123Q5XPI4 1314 aa11.83□□□□□ -0.52
SNORD88A-201ENST00000408314 EIF2S2P20042 333 aaKnown RBP11.82□□□□□ -0.52
SNORD88A-201ENST00000408314 PPP1R42Q7Z4L9 355 aa11.82□□□□□ -0.52
SNORD88A-201ENST00000408314 CFAP44Q96MT7 982 aa11.82□□□□□ -0.52
SNORD88A-201ENST00000408314 LAS1LQ9Y4W2 734 aaKnown RBP11.82□□□□□ -0.52
SNORD88A-201ENST00000408314 LTBP3Q9NS15 1303 aa11.82□□□□□ -0.52
SNORD88A-201ENST00000408314 TNRC6CQ9HCJ0 1690 aaKnown RBP11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 KLRG2A4D1S0 409 aaPredicted RBP11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 ZNF316A6NFI3 1004 aaPredicted RBP11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 ANP32CO43423 234 aa11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 ALDH1B1P30837 517 aa11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 GNAI1P63096 354 aa11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 HLFQ16534 295 aa11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 CCDC93Q567U6 631 aa11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 PRPF40BQ6NWY9 871 aaKnown RBP11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 TAOK3Q9H2K8 898 aa11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 ZBTB3Q9H5J0 574 aa11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 TRIM35Q9UPQ4 493 aa11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 NUP98P52948 1817 aa11.81□□□□□ -0.52
SNORD88A-201ENST00000408314 SBF1O95248 1867 aa11.8□□□□□ -0.52
SNORD88A-201ENST00000408314 FAM177BA6PVY3 158 aa11.8□□□□□ -0.52
SNORD88A-201ENST00000408314 KIF3CO14782 793 aa11.8□□□□□ -0.52
SNORD88A-201ENST00000408314 C21orf2O43822 256 aa11.8□□□□□ -0.52
SNORD88A-201ENST00000408314 TOMM70O94826 608 aa11.8□□□□□ -0.52
SNORD88A-201ENST00000408314 RASSF7Q02833 373 aa11.8□□□□□ -0.52
SNORD88A-201ENST00000408314 HDGFL1Q5TGJ6 251 aa11.8□□□□□ -0.52
SNORD88A-201ENST00000408314 TTLL7Q6ZT98 887 aa11.8□□□□□ -0.52
SNORD88A-201ENST00000408314 CCDC24Q8N4L8 307 aa11.8□□□□□ -0.52
SNORD88A-201ENST00000408314 DDX21Q9NR30 783 aaKnown RBP eCLIP11.8□□□□□ -0.52
SNORD88A-201ENST00000408314 NFKBIEO00221 500 aa11.79□□□□□ -0.52
SNORD88A-201ENST00000408314 APAF1O14727 1248 aa11.79□□□□□ -0.52
SNORD88A-201ENST00000408314 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
SNORD88A-201ENST00000408314 CC2D2BQ6DHV5 1058 aa11.79□□□□□ -0.52
SNORD88A-201ENST00000408314 DPY19L2Q6NUT2 758 aa11.79□□□□□ -0.52
SNORD88A-201ENST00000408314 RPGRQ92834 1020 aaKnown RBP11.79□□□□□ -0.52
SNORD88A-201ENST00000408314 TMX4Q9H1E5 349 aaPredicted RBP11.79□□□□□ -0.52
SNORD88A-201ENST00000408314 IFT57Q9NWB7 429 aa11.79□□□□□ -0.52
SNORD88A-201ENST00000408314 DBF4Q9UBU7 674 aaPredicted RBP11.79□□□□□ -0.52
SNORD88A-201ENST00000408314 TIAM2Q8IVF5 1701 aa11.79□□□□□ -0.52
SNORD88A-201ENST00000408314 HSPA6P17066 643 aa11.78□□□□□ -0.52
SNORD88A-201ENST00000408314 GPTP24298 496 aa11.78□□□□□ -0.52
SNORD88A-201ENST00000408314 ZNF34Q8IZ26 560 aa11.78□□□□□ -0.52
SNORD88A-201ENST00000408314 RTKN2Q8IZC4 609 aa11.78□□□□□ -0.52
SNORD88A-201ENST00000408314 RBM46Q8TBY0 533 aaKnown RBP11.78□□□□□ -0.52
SNORD88A-201ENST00000408314 ZNF219Q9P2Y4 722 aaPredicted RBP11.78□□□□□ -0.52
SNORD88A-201ENST00000408314 FER1L6Q2WGJ9 1857 aa11.78□□□□□ -0.52
SNORD88A-201ENST00000408314 CACNA1SQ13698 1873 aa11.77□□□□□ -0.53
SNORD88A-201ENST00000408314 GLTPD2A6NH11 291 aa11.77□□□□□ -0.53
SNORD88A-201ENST00000408314 PDIA6Q15084 440 aa11.77□□□□□ -0.53
SNORD88A-201ENST00000408314 CRY2Q49AN0 593 aa11.77□□□□□ -0.53
SNORD88A-201ENST00000408314 ERFEQ4G0M1 354 aa11.77□□□□□ -0.53
SNORD88A-201ENST00000408314 RBM17Q96I25 401 aaKnown RBP11.77□□□□□ -0.53
SNORD88A-201ENST00000408314 UTP14AQ9BVJ6 771 aaKnown RBP11.77□□□□□ -0.53
SNORD88A-201ENST00000408314 NMRK2Q9NPI5 230 aa11.77□□□□□ -0.53
SNORD88A-201ENST00000408314 HYPKQ9NX55 129 aa11.77□□□□□ -0.53
SNORD88A-201ENST00000408314 UBN2Q6ZU65 1347 aa11.77□□□□□ -0.53
SNORD88A-201ENST00000408314 ANKRD36CQ5JPF3 1778 aa11.77□□□□□ -0.53
SNORD88A-201ENST00000408314 NTSR2O95665 410 aa11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 VEGFAP15692 232 aaPredicted RBP11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 FSTL1Q12841 308 aa11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms